Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Synechocystis PCC6803 (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
21838..23121 - 1281 16329188 - sll1204 G COG0477 - H 2 0 +I 4.2 hypothetical protein
23139..24104 - 963 16329189 - sll1203 - - - H 2 0 unknown protein
24101..25144 - 1041 16329190 - sll1202 P COG0614 - H 2 0 unknown protein
25266..27857 - 2589 16329191 fhuA sll1409 P COG1629 - H 1 0 ferrichrome-iron receptor
27990..29030 - 1038 16329192 pcrR sll1408 K COG2207 - H 2 0 regulatory protein; PcrR
29098..29895 - 795 16329193 - sll1407 Q COG0500 - H 2 0 unknown protein
29968..32454 - 2484 16329194 fhuA sll1406 P COG1629 - H 0 0 ferrichrome-iron receptor
48067..48408 - 339 16329207 - sll1400 - - H 2 2 unknown protein
110808..111224 + 414 16329264 - slr0725 - - H 1 1 hypothetical protein
117869..118336 + 465 16329271 - slr0732 S COG3431 H 2 2 hypothetical protein
142559..142981 + 420 16329294 - slr0240 K COG3682 H 1 2 unknown protein
216264..218327 - 2061 16329365 ccmM sll1031 R COG0663 + H 0 0 carbon dioxide concentrating mechanism protein; CcmM
218407..218709 - 300 16329366 ccmL sll1030 - - + H 0 2 +V 3.7 carbon dioxide concentrating mechanism protein; CcmL
218742..219077 - 333 16329367 ccmK sll1028 - - + H 0 2 +V 4.3 carbon dioxide concentrating mechanism protein; CcmK
219206..219517 - 309 16329368 ccmK sll1029 - - + H 1 2 +V 4.5 carbon dioxide concentrating mechanism protein; CcmK
219979..221463 - 1482 16329369 gltD sll1027 E COG0493 + H 0 0 NADH-glutamate synthase small subunit
221742..223067 + 1323 16329370 ank slr1109 R COG0666 + H 0 0 erythroid ankyrin
234305..234838 + 531 16329380 - slr1778 - - H 2 1 unknown protein
358760..359350 + 588 16329499 - slr1613 - - - H 2 1 unknown protein
359668..359973 + 303 16329500 - slr1614 - - - H 2 2 unknown protein
360030..361166 + 1134 16329501 rfbE slr1615 M COG0399 - H 0 0 perosamine synthetase
361163..362188 + 1023 16329502 - slr1616 E COG0458 - H 1 0 unknown protein
362185..363420 + 1233 16329503 - slr1617 M COG0451 - H 2 0 unknown protein
363433..364218 + 783 16329504 - slr1618 Q COG0500 - H 1 0 unknown protein
364247..364996 + 747 16329505 - slr1619 Q COG3510 - H 0 0 hypothetical protein
365274..365621 + 345 16329506 - slr1062 - - - H 1 2 unknown protein
365716..367785 + 2067 16329507 - slr1063 M COG0463 - H 2 0 hypothetical protein
367807..368910 + 1101 16329508 rfbU slr1064 M COG0438 - H 1 0 mannosyltransferase B
369149..370219 + 1068 16329509 - slr1065 M COG0463 - H 2 0 unknown protein
370285..371490 + 1203 16329510 - slr1066 M COG0438 - H 2 0 unknown protein
371487..372509 + 1020 16329511 galE slr1067 M COG1087 - H 1 0 UDP-glucose-4-epimerase
372811..373167 + 354 16329512 - slr1068 Q COG0500 - H 2 2 unknown protein
373231..373644 + 411 16329513 - slr1069 Q COG0500 - H 2 1 +C 3.7 unknown protein
373654..374511 + 855 16329514 - slr1070 M COG0463 - H 2 1 unknown protein
374646..375452 + 804 16329515 - slr1071 Q COG0500 - H 2 0 unknown protein
375470..376432 + 960 16329516 yefA slr1072 M COG1089 - H 0 0 GDP-D-mannose dehydratase
376485..377639 + 1152 16329517 - slr1073 M COG0438 - H 2 0 unknown protein
377620..378951 + 1329 16329518 - slr1074 - - - H 2 0 +F 3.3 unknown protein
379065..379913 + 846 16329519 - slr1075 L COG3335 - H 2 0 +K 3.2 transposase
380030..381175 + 1143 16329520 - slr1076 M COG0438 - H 1 0 unknown protein
382392..382646 + 252 16329522 - ssr1765 S COG1598 - H 1 2 hypothetical protein
382643..382873 + 228 16329523 - ssr1766 N COG1724 - H 1 2 +K 4.6 unknown protein
382949..383266 + 315 16329524 galE slr1078 M COG1087 H 1 1 UDP-glucose-4-epimerase
473953..474204 - 249 16329604 vapC ssl2923 R COG1487 - H 2 2 virulence associated protein C
474205..474432 - 225 16329605 vapB ssl2922 - - - H 2 2 +I 4.2 virulence associated protein B
475110..475445 - 333 16329607 - sll1505 S COG2361 - H 2 2 +I 4.1 hypothetical protein
475435..475743 - 306 16329608 - sll1504 R COG1669 - H 2 2 hypothetical protein
475873..477399 - 1524 16329609 - sll1503 L COG3344 - H 2 0 unknown protein
542105..542596 - 489 16329654 - sll1642 - - H 2 1 unknown protein
542803..543342 + 537 16329655 capA slr1764 T COG2310 H 2 1 cAMP binding protein
545250..545588 + 336 16329658 - slr1767 - - H 1 2 unknown protein
667852..668481 - 627 16329769 - sll0983 Q COG0500 H 1 1 unknown protein
731363..731674 - 309 16329828 - sll1574 T COG0515 H 1 2 unknown protein
851717..852142 + 423 16329952 - slr1902 L COG3677 H 1 1 transposase
893261..893590 + 327 16329983 - slr1209 S COG2442 H 1 2 unknown protein
893583..893972 + 387 16329984 - slr1210 - - H 2 2 unknown protein
1001639..1002106 - 465 16330079 - sll1455 - - H 1 1 unknown protein
1056119..1056466 + 345 16330130 - slr1241 R COG1669 H 2 1 hypothetical protein
1142501..1142893 - 390 16330197 - sll0872 - - H 1 2 unknown protein
1196836..1197162 + 324 16330245 - slr1859 T COG1366 - H 2 2 +M 3.3 unknown protein
1197262..1199166 + 1902 16330246 ICFG slr1860 T COG2208 - H 1 0 ICFG protein
1199172..1199603 + 429 16330247 - slr1861 T COG2172 - H 1 0 unknown protein
1199708..1200412 + 702 16330248 - slr1862 - - - H 1 0 unknown protein
1200376..1201392 - 1014 16330249 - sll1780 L COG3385 - H 2 0 transposase
1201494..1203014 + 1518 16330250 - slr1863 - - - H 2 0 unknown protein
1203028..1204098 + 1068 16330251 - slr1864 R COG0679 - H 1 0 unknown protein
1204276..1205538 + 1260 16330252 - slr1865 - - - H 1 0 unknown protein
1205546..1206547 + 999 16330253 - slr1866 N COG0840 - H 1 0 unknown protein
1222610..1222927 - 315 16330265 - sll1769 - - H 1 2 unknown protein
1290478..1290957 + 477 16330335 - slr1811 - - - H 0 2 hypothetical protein
1291080..1291556 + 474 16330336 - slr1812 - - - H 2 2 hypothetical protein
1291631..1292092 + 459 16330337 - slr1813 - - - H 1 2 hypothetical protein
1292215..1292679 + 462 16330338 - slr1814 - - H 2 2 hypothetical protein
1292820..1293356 + 534 16330339 - slr1815 - - - H 2 2 unknown protein
1293398..1295551 + 2151 16330340 - slr1816 O COG3914 - H 2 0 unknown protein
1295568..1296380 - 810 16330341 - sll1696 - - - H 1 0 unknown protein
1296382..1296894 - 510 16330342 hofG sll1695 N COG2165 - H 1 0 general secretion pathway protein G
1369656..1370018 + 360 16330410 - slr0870 - - H 2 2 unknown protein
1370043..1370426 + 381 16330411 - slr0871 - - - H 2 2 +IK 3.2 3.0 unknown protein
1375351..1378545 + 3192 16330414 - slr1243 - - - H 2 0 unknown protein
1378662..1379711 - 1047 16330415 - sll1164 G COG0697 - H 2 0 unknown protein
1380085..1380792 - 705 16330417 - sll1162 - - - H 0 0 unknown protein
1380883..1381890 - 1005 16330418 - sll1161 T COG2114 - H 1 0 adenylate cyclase
1382086..1382568 - 480 16330419 - sll1160 - - - H 0 0 unknown protein
1382603..1383259 - 654 16330420 - sll1159 O COG1225 - H 1 0 unknown protein
1383339..1383755 - 414 16330421 - sll1158 - - - H 0 1 unknown protein
1383828..1384736 + 906 16330422 - slr1245 K COG0583 - H 1 0 transcriptional regulator
1384824..1385084 + 258 16330423 - ssr2078 L COG3293 - H 0 2 +CM 4.0 3.5 transposase
1385212..1385748 + 534 16330424 - slr1246 L COG3293 - H 0 0 transposase
1385754..1386170 - 414 16330425 - sll1157 L COG1662 - H 0 2 transposase
1386059..1386484 - 423 16330426 - sll1156 L COG3677 - H 1 2 transposase
1460129..1460566 - 435 16330490 - sll1613 - - H 1 2 unknown protein
1484212..1484538 - 324 16330513 - sll1596 O COG0526 H 2 2 PCC7942 clock gene...ORFE
1553601..1553960 - 357 16330571 - sll1985 - - H 2 2 transposase
1555061..1555774 - 711 16330574 - sll1982 - - H 2 2 transposase
1617376..1617813 - 435 16330629 - sll1411 S COG2361 H 1 2 hypothetical protein
1620276..1620539 + 261 16330633 - ssr3571 S COG2161 - H 2 2 hypothetical protein
1621978..1623093 + 1113 16330635 kpsT slr2108 G COG1134 - H 0 0 polysialic acid transport ATP-binding protein; KpsT
1623130..1623648 - 516 16330636 - sll1999 L COG3385 - H 2 2 +K 3.3 transposase
1623723..1624571 - 846 16330637 - sll1998 L COG3335 - H 2 0 +K 3.2 transposase
1624628..1625095 - 465 16330638 - sll1997 L COG3385 - H 2 2 +A -3.0 transposase
1625291..1625632 + 339 16330639 - slr2110 G COG1082 - H 2 2 unknown protein
1625622..1626095 + 471 16330640 - slr2111 M COG0399 - H 0 1 unknown protein
1626165..1626524 + 357 16330641 - slr2112 L COG3335 - H 2 2 +K 4.5 transposase
1626518..1627012 + 492 16330642 - slr2113 L COG3335 - H 2 0 transposase
1626981..1628018 + 1035 16330643 spsC slr2114 M COG0399 - H 2 0 spore coat polysaccharide biosynthesis protein; SpsC
1628039..1629607 + 1566 16330644 - slr2115 - - - H 2 0 unknown protein
1629604..1630434 + 828 16330645 spsA slr2116 M COG0463 - H 2 0 spore coat polysaccharide biosynthesis protein; SpsA
1630460..1631005 + 543 16330646 - slr2117 - - - H 2 0 +Y 3.5 unknown protein
1631265..1632530 + 1263 16330647 - slr2118 M COG0438 - H 2 0 unknown protein
1632538..1633374 + 834 16330648 - slr2119 Q COG0500 - H 1 0 unknown protein
1634411..1635058 + 645 16330650 - slr2121 R COG1878 H 1 1 hypothetical protein
1640786..1641238 + 450 16330657 - slr2128 - - H 1 2 hypothetical protein
1682001..1682327 - 324 16330693 - sll1219 - - H 1 1 unknown protein
1724597..1725178 - 579 16330741 - sll1258 F COG0717 - H 0 0 unknown protein
1725431..1725925 - 492 16330742 - sll1257 L COG3335 - H 2 0 transposase
1725919..1726278 - 357 16330743 - sll1256 L COG3335 - H 2 2 +K 4.5 transposase
1726697..1727299 + 600 16330744 - slr1338 - - - H 1 0 unknown protein
1727283..1727741 + 456 16330745 - slr1339 - - - H 2 2 +V -3.1 unknown protein
1727770..1728306 + 534 16330746 - slr1340 K COG0454 - H 2 0 unknown protein
1729012..1730028 - 1014 16330747 - sll1255 L COG3385 - H 2 0 transposase
1730166..1731206 - 1038 16330748 - sll1254 N COG1253 - H 0 0 hemolysin
1732809..1734323 + 1512 16330750 - slr1343 R COG3046 - H 0 0 unknown protein
1740388..1740774 - 384 16330756 - sll1250 - - H 1 2 hypothetical protein
1831561..1831929 - 366 16330840 petF sll1382 C COG0633 H 1 2 ferredoxin
1877582..1878055 + 471 16330879 - slr1283 L COG3335 H 2 1 transposase
1924251..1924850 + 597 16330922 - slr1161 F COG0590 H 1 1 unknown protein
1933468..1933854 - 384 16330929 - sll1092 S COG3744 H 2 2 unknown protein
1965485..1965949 - 462 16330960 - sll1562 - - - H 1 2 +C 3.1 unknown protein
1969468..1970430 + 960 16330962 - slr1681 - - - H 0 0 unknown protein
1970581..1970988 + 405 16330963 - slr1682 - - - H 2 2 transposase
1970952..1971968 - 1014 16330964 - sll1560 L COG3385 - H 2 0 transposase
1972154..1972549 + 393 16330965 - slr1683 - - - H 2 2 +K 3.9 transposase
1972609..1973061 + 450 16330966 - slr1684 - - - H 2 2 +KW 3.1 3.1 transposase
2018851..2019237 - 384 16331006 - sll0911 - - H 2 1 unknown protein
2070975..2071382 + 405 16331054 psbZ slr1645 - - H 1 1 photosystem II 11 kD protein
2137259..2137738 + 477 16331111 - slr0294 - - H 1 2 unknown protein
2137686..2138081 + 393 16331112 - slr0392 - - H 2 2 unknown protein
2178325..2178837 + 510 16331140 - slr0146 - - H 1 1 unknown protein
2290089..2290421 + 330 16331241 - slr0334 - - H 1 2 unknown protein
2443461..2443859 - 396 16331365 - sll0317 L COG3385 H 2 2 transposase
2445550..2445915 + 363 16331368 - slr0353 - - H 1 2 unknown protein
2518321..2521857 + 3534 16331424 - slr0222 T COG0642 - H 1 0 hybrid sensory kinase
2523867..2524562 + 693 16331426 - slr0224 I COG3000 - H 2 2 +FH 3.7 4.4 hypothetical protein
2524573..2525067 - 492 16331427 - sll0201 L COG3335 - H 2 0 transposase
2525061..2525420 - 357 16331428 - sll0200 L COG3335 - H 2 2 +K 4.5 transposase
2546527..2547027 - 498 16331450 - sll0410 R COG0824 H 1 1 unknown protein
2577552..2578043 + 489 16331482 trpG slr0055 E COG0512 H 1 1 anthranilate synthase component II
2631207..2631608 - 399 16331532 vapC sll0690 R COG1487 H 1 1 virulence associated protein C
2737929..2738552 - 621 16331627 - sll0181 - - H 2 2 unknown protein
2771322..2772494 + 1170 16331652 moeA slr0900 H COG0303 - H 1 0 molybdopterin biosynthesis; MoeA
2772470..2773453 + 981 16331653 moaA slr0901 H COG2896 - H 1 0 molybdenum cofactor biosynthesis protein A
2773454..2774497 + 1041 16331654 moaC slr0902 H COG0746 - H 1 0 molybdenum cofactor biosynthesis protein C
2774481..2774726 + 243 16331655 - ssr1527 H COG1977 - H 2 2 unknown protein
2774732..2775169 + 435 16331656 moaE slr0903 H COG0314 - H 1 1 +H 3.5 molybdopterin (MPT) converting factor, subunit 2
2777447..2778946 + 1497 16331659 bchE slr0905 C COG1032 - H 1 0 Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66 kD subunit
2784503..2785855 + 1350 16331662 - slr0909 Q COG0500 - H 0 0 unknown protein
2785941..2786717 + 774 16331663 - slr0912 - - - H 1 0 unknown protein
2786798..2788417 + 1617 16331664 - slr0913 - - - H 2 0 unknown protein
2788450..2790246 + 1794 16331665 - slr0914 - - - H 2 0 +F 3.1 unknown protein
2798072..2798410 + 336 16331676 - slr0923 - - H 1 2 hypothetical protein
2815069..2815509 + 438 16331692 - slr0572 - - H 1 1 unknown protein
2815567..2816013 - 444 16331693 - sll0543 - - - H 1 1 unknown protein
2816066..2816320 - 252 16331694 - ssl1046 - - - H 1 2 unknown protein
2816517..2816960 + 441 16331695 - slr0573 - - - H 2 2 +S 3.7 unknown protein
2816991..2817110 - 117 16331696 - sgl0001 S COG2954 - H 0 2 +Y 5.4 unknown protein
2980659..2980967 - 306 16331841 - sll0101 - - H 2 2 unknown protein
3075546..3075848 - 300 16331923 - sll0780 - - - H 1 2 +S 4.7 unknown protein
3078838..3081210 - 2370 16331925 - sll0778 T COG1716 - H 0 0 ABC transporter
3081264..3082181 - 915 16331926 - sll0777 M COG1876 - H 2 0 unknown protein
3082151..3083668 - 1515 16331927 pknA sll0776 T COG0515 - H 1 0 eukaryotic protein kinase
3083746..3084123 - 375 16331928 - sll0775 - - - H 1 2 +C 3.3 unknown protein
3084346..3084585 + 237 16331929 ESI3 ssr1169 S COG0401 - H 0 2 +CI 3.0 4.5 salt-stress induced hydrophobic peptide
3088419..3088883 + 462 16331931 - slr0698 S COG2954 - H 0 0 +Y 3.1 unknown protein
3089093..3089515 + 420 16331932 - slr0699 - - - H 2 0 +F 3.5 unknown protein
3089656..3091014 + 1356 16331933 - slr0700 E COG0531 - H 0 0 unknown protein
3091244..3091657 + 411 16331934 merR slr0701 K COG0789 - H 0 1 mercuric resistance operon regulatory protein
3093408..3093845 - 435 16331936 - sll0678 - - - H 2 2 unknown protein
3093908..3094693 - 783 16331937 - sll0677 L COG3293 - H 0 0 transposase
3094773..3094970 - 195 16331938 - ssl1277 - - - H 2 2 +F 4.8 transposase
3095044..3095586 - 540 16331939 - sll0676 - - - H 1 1 unknown protein
3096048..3096332 + 282 16331940 - ssr1175 L COG3335 - H 1 2 +R 3.3 transposase
3096388..3097173 + 783 16331941 - slr0703 L COG3293 - H 0 0 transposase
3097275..3097379 + 102 16331942 - smr0002 L COG3335 - H 2 2 +ITY 4.2 -3.3 4.3 transposase
3097436..3098284 + 846 16331943 - slr0704 L COG3335 - H 2 0 +K 3.2 transposase
3098425..3098718 + 291 16331944 - ssr1176 L COG3335 - H 2 1 transposase
3101820..3102962 - 1140 16331946 - sll0671 P COG0598 - H 2 0 magnesium and cobalt transport protein
3103070..3103579 - 507 16331947 - sll0670 S COG1376 - H 1 2 unknown protein
3103784..3104104 - 318 16331948 - sll0669 - - - H 0 2 unknown protein
3104142..3107102 + 2958 16331949 polA slr0707 L COG0258 - H 0 0 DNA polymerase I
3108643..3109023 - 378 16331951 - sll0668 - - - H 2 2 +M 3.3 transposase
3109036..3109695 - 657 16331952 - sll0667 - - - H 2 2 +K 3.8 transposase
3109733..3110152 - 417 16331953 - sll0666 L COG3293 - H 0 2 transposase
3110216..3110560 - 342 16331954 - sll0665 L COG3293 - H 1 2 +W 3.1 transposase
3110910..3111830 - 918 16331955 - sll0664 L COG0322 - H 2 0 unknown protein
3127864..3128313 - 447 16331974 - sll0742 - - H 1 2 hypothetical protein
3273693..3274016 + 321 16332090 - slr1421 - - H 1 2 unknown protein
3281954..3282307 + 351 16332096 - slr1425 - - H 1 2 unknown protein
3351526..3352353 + 825 16332150 - slr0666 - - - H 0 0 unknown protein
3352682..3353203 + 519 16332151 - slr0667 - - - H 2 0 unknown protein
3353196..3353732 + 534 16332152 - slr0668 - - - H 2 2 unknown protein
3398409..3398717 - 306 16332188 - sll1476 - - - H 1 2 +C 4.3 unknown protein
3399457..3400350 - 891 16332190 - sll1475 T COG0642 - H 0 0 sensory transduction histidine kinase
3400402..3401418 - 1014 16332191 - sll1474 L COG3385 - H 2 0 transposase
3401456..3402901 - 1443 16332192 - sll1473 T COG2202 - H 0 0 putative chromatic adaptation sensor receptor (rcaE) like
3402929..3403372 - 441 16332193 - sll1472 - - - H 2 2 +K 3.6 unknown protein
3405462..3405848 + 384 16332196 - slr1585 L COG3335 - H 2 2 +K 4.0 transposase
3405991..3406311 + 318 16332197 - slr1586 L COG3335 - H 2 2 +M 3.4 transposase
3418971..3419420 - 447 16332207 - sll0733 - - H 1 1 unknown protein
3513516..3514040 + 522 16332280 - slr0462 - - H 2 2 transposase
3538411..3538803 + 390 16332306 - slr0588 - - H 1 1 unknown protein

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