Horizontal Gene Transfer Database

Streptomyces_coelicolor: 7512 proteins

See the statistical parameters of all the genome.
See the correspondence analysis of relative synonymous codon usages for Streptomyces_coelicolor genes.

See the extraneous regions in terms of G+C content.
See the list of the proposed horizontally transferred genes.
Download the tab-delimited file with all the statistical calculations for each gene. See the Abbreviations used.



 Statistical parameters:

G+C content:
 
G+C(1) G+C(2) G+C(3) G+C(T)
mean value 72.8 51.5 92.5 72.3
st. dev. 5.9 5.8 4.9 3.5
skewness -0.4 0.4 -2.0 -1.4
kurtosis 3.2 4.0 9.0 21.4


 Amino acid content (in %):

 
AA Mean value SD AA Mean value SD
A 13.7 3.4 M 1.6 1.0
C 0.8 0.8 N 1.6 1.1
D 6.1 2.0 P 6.2 2.3
E 5.7 2.3 Q 2.6 1.4
F 2.6 1.4 R 8.5 2.8
G 9.5 2.5 S 5.0 1.8
H 2.4 1.3 T 6.1 1.9
I 2.9 1.6 V 8.8 2.3
K 2.0 1.8 W 1.5 1.0
L 10.2 2.8 Y 2.0 1.1