Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Vibrio vulnificus YJ016 chr. 2 (See the Abbreviations used):


Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
67248..69428 + 2178 37200262 VVA0063 - - - H 2 2 ornithine decarboxylase, inducible
132221..134413 - 2190 37200316 VVA0117 - - - H 1 2 long-chain acyl-CoA synthetase
151786..152739 + 951 37200334 VVA0135 - - - + H 1 0 peptide ABC transporter, ATP-binding protein
153801..157250 + 3447 37200336 VVA0137 - - - + H 1 0 hypothetical protein
157500..158510 - 1008 37200337 VVA0138 - - - + H 1 0 transcriptional regulator
158923..160770 + 1845 37200338 VVA0139 - - - + H 1 0 conserved hypothetical protein
160842..162476 + 1632 37200339 VVA0140 - - - + H 0 0 conserved hypothetical protein
162442..162615 - 171 37200340 VVA0141 - - - + H 1 0 hypothetical protein
162833..164137 + 1302 37200341 VVA0142 - - - + H 0 0 maltoporin
182304..182426 + 120 37200356 VVA0156 - - - + H 1 0 hypothetical protein
182996..184318 - 1320 37200357 VVA0158 - - - + H 1 0 membrane-fusion protein
185085..186092 - 1005 37200359 VVA0160 - - - + H 1 0 transcriptional regulator
186275..187282 - 1005 37200360 VVA0161 - - - + H 0 0 +M 4.0 galactoside ABC transporter, permease protein
187293..188801 - 1506 37200361 VVA0162 - - - + H 2 0 ABC-type sugar transport system, ATPase component
190239..193334 - 3093 37200364 VVA0165 - - - + H 0 0 beta-galactosidase
202674..203594 + 918 37200375 VVA0176 - - - - H 1 2 transposase
203579..204130 - 549 37200376 VVA0177 - - - - H 2 2 Rhs family protein
205029..205292 - 261 37200377 VVA0178 - - - - H 0 0 hypothetical protein
221900..223303 - 1401 37200394 VVA0195 - - - H 1 2 PTS system, fructose-specific IIBC component
224802..225026 + 222 37200397 VVA0197 - - - H 2 2 hypothetical protein
301757..302566 - 807 37200466 VVA0266 - - - - H 2 2 +C 8.1 membrane-associated phospholipid phosphatase
302669..303508 - 837 37200467 VVA0267 - - - - H 1 1 phosphomethylpyrimidine kinase
303843..304487 - 642 37200468 VVA0268 - - - - H 1 0 uncharacterized conserved protein
310818..310973 - 153 37200470 VVA0270 - - - - H 0 0 hypothetical protein
311441..311797 - 354 37200471 VVA0271 - - - - H 2 1 +N 3.0 conserved hypothetical protein
337075..337461 - 384 37200497 VVA0297 - - - H 1 2 lactoylglutathione lyase
338474..338647 + 171 37200499 VVA0299 - - - H 1 2 hypothetical protein
347412..347540 + 126 37200508 VVA0307 - - - - H 1 0 hypothetical protein
348096..348596 - 498 37200509 VVA0309 - - - - H 2 2 +AN -3.1 3.3 conserved hypothetical protein
348674..349084 - 408 37200510 VVA0310 - - - - H 2 2 +AL -3.6 7.5 hypothetical protein
349791..350399 - 606 37200512 VVA0312 - - - - H 1 0 hypothetical protein
350458..350901 + 441 37200513 VVA0313 - - - - H 2 0 +K 3.0 RelB protein
350898..351176 + 276 37200514 VVA0314 - - - - H 2 2 +K 3.9 plasmid stabilization system protein
351323..352339 - 1014 37200515 VVA0315 - - - - H 1 2 uncharacterized protein conserved in bacteria
353952..354539 - 585 37200517 VVA0317 - - - - H 1 0 hypothetical protein
356081..356623 - 540 37200518 VVA0318 - - - - H 2 0 bacterial lipocalin
356814..357542 - 726 37200519 VVA0319 - - - - H 2 0 outer membrane protein V
451148..451720 + 570 37200584 VVA0384 - - - - H 2 0 +S 3.2 putative calcium-binding protein
451765..453477 + 1710 37200585 VVA0385 - - - - H 2 0 ABC-type protease/lipase transport system, ATPase and permease component
454991..455404 - 411 37200587 VVA0387 - - - - H 0 0 hypothetical protein
455388..456755 - 1365 37200588 VVA0388 - - - - H 1 0 hypothetical polysaccharide biosynthesis related protein
456712..457743 - 1029 37200589 VVA0389 - - - - H 2 2 glycosyltransferase
457740..458573 - 831 37200590 VVA0390 - - - - H 1 0 unknown protein
458726..459766 - 1038 37200591 VVA0391 - - - - H 0 0 putative lipopolysaccharide biosynthesis protein
459790..462009 - 2217 37200592 VVA0392 - - - - H 2 1 +KN 3.2 3.5 putative exopolysaccharide biosynthesis protein
461990..462523 - 531 37200593 VVA0393 - - - - H 1 0 putative polysaccharide export-related protein
462537..463889 - 1350 37200594 VVA0394 - - - - H 0 0 conserved hypothetical protein
463786..465186 - 1398 37200595 VVA0395 - - - - H 0 1 putative capsular polysaccharide biosynthesis glycosyltransferase
465602..466717 - 1113 37200596 VVA0396 - - - - H 0 0 ABC-type sugar transport system, ATPase component
467386..468567 + 1179 37200597 VVA0397 - - - - H 0 0 maltose-binding periplasmic protein
669889..670008 + 117 37200792 VVA0591 - - - - H 2 0 hypothetical protein
669977..670795 + 816 37200793 VVA0592 - - - - H 2 2 +GT 4.7 3.2 hypothetical protein
672123..672584 + 459 37200795 VVA0594 - - - - H 2 0 hypothetical protein
672584..673786 + 1200 37200796 VVA0595 - - - - H 0 0 conserved hypothetical protein
673783..675048 + 1263 37200797 VVA0596 - - - - H 2 2 TadA protein
675045..675962 + 915 37200798 VVA0597 - - - - H 1 0 Flp pilus assembly protein TadB
676830..677978 + 1146 37200800 VVA0599 - - - - H 2 0 Flp pilus assembly protein TadD
677975..678502 + 525 37200801 VVA0600 - - - - H 2 0 +I 3.2 hypothetical protein
678429..679073 + 642 37200802 VVA0601 - - - - H 1 0 hypothetical protein
679027..680355 + 1326 37200803 VVA0602 - - - - H 1 0 conserved hypothetical protein
680327..680923 + 594 37200804 VVA0603 - - - - H 1 0 outer membrane protein
681051..681185 + 132 37200805 VVA0604 - - - - H 0 0 hypothetical protein
681162..681542 - 378 37200806 VVA0605 - - - - H 0 0 hypothetical protein
732252..735740 + 3486 37200853 VVA0652 - - - - H 1 2 +C 4.0 bacterial surface protein
737287..738114 - 825 37200856 VVA0655 - - - - H 1 0 +S 3.1 AraC-type DNA-binding domain-containing protein
738229..740265 - 2034 37200857 VVA0656 - - - - H 1 0 exoribonuclease II
740601..742526 + 1923 37200858 VVA0657 - - - - H 0 0 DNA and RNA helicase
779838..781535 + 1695 37200892 VVA0690 - - - H 2 1 hypothetical protein
847021..848127 + 1104 37200949 VVA0747 - - - H 2 2 putative arginase
876798..877604 - 804 37200980 VVA0778 - - - - H 0 0 uncharacterized protein
877706..878293 + 585 37200981 VVA0779 - - - - H 1 0 hypothetical protein
878281..880269 + 1986 37200982 VVA0780 - - - - H 0 0 conserved hypothetical protein
880554..882692 - 2136 37200983 VVA0781 - - - - H 2 2 heme receptor
882894..883808 + 912 37200984 VVA0782 - - - - H 0 0 transcriptional regulator
883857..886535 - 2676 37200985 VVA0783 - - - - H 2 0 acyl-CoA synthetase
886760..887335 + 573 37200986 VVA0784 - - - - H 0 0 uncharacterized protein conserved in bacteria
888784..889158 + 372 37200988 VVA0786 - - - - H 1 1 +K 3.7 conserved hypothetical protein
889161..889472 + 309 37200989 VVA0787 - - - - H 1 0 sui1 family protein
889218..889514 - 294 37200990 VVA0788 - - - - H 2 1 hypothetical protein
890814..890984 + 168 37200993 VVA0791 - - - - H 0 2 +MS 4.0 4.3 hypothetical protein
890981..892276 + 1293 37200994 VVA0792 - - - - H 2 2 +EK 5.3 3.6 vpf402 homologue
909518..910513 - 993 37201018 VVA0816 - - - H 1 2 conserved hypothetical protein
954955..956652 - 1695 37201056 VVA0854 - - - H 1 2 conserved hypothetical protein
960261..960722 - 459 37201063 VVA0861 - - - - H 1 0 hypothetical protein
960719..961765 - 1044 37201064 VVA0862 - - - - H 0 2 +C 3.0 conserved hypothetical protein
962217..963260 - 1041 37201065 VVA0863 - - - - H 1 2 hypothetical protein
963665..963919 - 252 37201067 VVA0865 - - - - H 1 0 conserved hypothetical protein
964081..964725 + 642 37201068 VVA0866 - - - - H 2 2 +NS 3.6 4.1 hypothetical protein
965081..965269 + 186 37201069 VVA0867 - - - - H 1 2 hypothetical protein
965309..965830 + 519 37201070 VVA0868 - - - - H 1 2 hypothetical protein
965796..966323 + 525 37201071 VVA0869 - - - - H 2 2 +KM 5.0 3.2 predicted transcriptional regulator
966338..966979 + 639 37201072 VVA0870 - - - - H 1 0 conserved hypothetical protein
967272..967490 + 216 37201074 VVA0872 - - - - H 1 0 hypothetical protein
967487..968422 + 933 37201075 VVA0873 - - - - H 0 2 +S 4.3 hypothetical protein
968422..968592 + 168 37201076 VVA0874 - - - - H 2 2 +AK -3.6 4.7 hypothetical protein
972152..972310 + 156 37201083 VVA0881 - - - H 1 2 hypothetical protein
973547..974005 + 456 37201087 VVA0885 - - - H 1 2 hypothetical protein
975688..975885 + 195 37201090 VVA0887 - - - - H 1 0 hypothetical protein
976507..977043 + 534 37201092 VVA0890 - - - - H 1 2 +FRT 4.0 3.7 4.4 conserved hypothetical protein
977166..977783 - 615 37201093 VVA0891 - - - - H 0 2 +T 3.9 conserved hypothetical protein
977797..978993 - 1194 37201094 VVA0892 - - - - H 1 1 +N 3.6 amino acid biosynthesis aminotransferase
979195..981507 - 2310 37201095 VVA0893 - - - - H 0 0 +K 3.0 methyl-accepting chemotaxis protein
1052464..1053411 - 945 37201156 VVA0953 - - - + H 0 0 dienelactone hydrolase
1054535..1055533 - 996 37201158 VVA0956 - - - + H 0 0 uroporphyrinogen-III methylase
1055455..1058097 - 2640 37201159 VVA0958 - - - + H 0 0 anaerobic dehydrogenase
1055491..1055616 + 123 37201160 VVA0955 - - - + H 2 0 hypothetical protein
1058081..1058239 + 156 37201161 VVA0957 - - - + H 1 0 hypothetical protein
1058315..1058785 - 468 37201162 VVA0959 - - - + H 1 2 +LRS 5.9 6.0 -3.7 acetyltransferase
1107001..1108323 - 1320 37201196 VVA0993 - - - - H 0 0 uncharacterized protein conserved in bacteria
1108347..1108802 - 453 37201197 VVA0994 - - - - H 0 0 uncharacterized protein conserved in bacteria
1108803..1110107 - 1302 37201198 VVA0995 - - - - H 1 0 uncharacterized conserved protein
1110336..1112504 + 2166 37201199 VVA0996 - - - - H 2 2 conserved hypothetical protein
1112568..1113185 - 615 37201200 VVA0997 - - - - H 2 0 glutathione S-transferase
1113286..1113873 + 585 37201201 VVA0998 - - - - H 0 0 transcriptional regulator
1114272..1114535 - 261 37201203 VVA1000 - - - - H 0 0 uncharacterized protein conserved in bacteria
1114893..1115237 - 342 37201205 VVA1002 - - - - H 0 2 +LT 3.3 -3.4 conserved hypothetical protein
1115499..1117097 + 1596 37201206 VVA1003 - - - - H 0 2 +C 10.6 predicted signal transduction protein
1117197..1117529 - 330 37201207 VVA1004 - - - - H 2 2 pterin-4a-carbinolamine dehydratase
1117522..1118316 - 792 37201208 VVA1005 - - - - H 0 0 phenylalanine-4-hydroxylase
1118474..1120516 + 2040 37201209 VVA1006 - - - - H 1 2 +W 3.2 acetyl-CoA synthase
1135832..1136848 - 1014 37201227 VVA1024 - - - + H 1 0 electron transfer flavoprotein, alpha subunit
1136829..1137605 - 774 37201228 VVA1025 - - - + H 1 0 electron transfer flavoprotein, beta subunit
1137812..1139479 + 1665 37201229 VVA1026 - - - + H 1 0 electron transfer flavoprotein-ubiquinone oxidoreductase
1139486..1139662 + 174 37201230 VVA1027 - - - + H 1 0 +V 3.4 hypothetical protein
1139881..1141512 + 1629 37201231 VVA1028 - - - + H 0 0 methyl-accepting chemotaxis protein
1165692..1166450 - 756 37201240 VVA1037 - - - + H 1 0 dehydrogenase
1166498..1167568 - 1068 37201241 VVA1038 - - - + H 0 0 3-hydroxyisobutyrate dehydrogenase
1167523..1168650 - 1125 37201242 VVA1039 - - - + H 0 0 putative enoyl-CoA hydratase/isomerase
1168672..1169469 - 795 37201243 VVA1040 - - - + H 1 0 putative enoyl-CoA hydratase/isomerase
1169496..1170665 - 1167 37201244 VVA1041 - - - + H 1 0 acyl-CoA dehydrogenase
1170688..1172235 - 1545 37201245 VVA1042 - - - + H 1 0 NAD-dependent aldehyde dehydrogenase
1172288..1173541 - 1251 37201246 VVA1043 - - - + H 1 0 acetyl-CoA acetyltransferase
1173568..1173744 - 174 37201247 VVA1045 - - - + H 1 0 hypothetical protein
1173701..1174090 + 387 37201248 VVA1044 - - - + H 1 0 predicted transcriptional regulator
1175359..1176963 + 1602 37201250 VVA1047 - - - + H 0 2 +R 4.2 acetyl-CoA carboxylase, carboxyltransferase component
1176990..1177799 + 807 37201251 VVA1048 - - - + H 2 0 putative enoyl-CoA hydratase/isomerase
1177796..1178713 + 915 37201252 VVA1049 - - - + H 1 0 putative hydroxymethylglutaryl-CoA lyase
1178921..1179514 + 591 37201253 VVA1050 - - - + H 0 0 peroxiredoxin
1202008..1203789 + 1779 37201280 VVA1077 - - - H 1 1 methyl-accepting chemotaxis protein
1249658..1250488 + 828 37201323 VVA1120 - - - H 1 2 AraC-type DNA-binding domain-containing protein
1284553..1286082 + 1527 37201363 VVA1159 - - - H 1 2 DNA and RNA helicase
1462948..1464402 + 1452 37201524 VVA1320 - - - + H 0 0 signal transduction histidine kinase
1464399..1465049 + 648 37201526 VVA1322 - - - + H 1 0 response regulator
1465046..1465876 + 828 37201527 VVA1323 - - - + H 2 2 +IMSV -3.3 4.4 -3.7 3.4 conserved hypothetical protein
1465979..1468213 + 2232 37201528 VVA1324 - - - + H 1 2 conserved hypothetical protein
1468817..1470238 + 1419 37201529 VVA1325 - - - + H 2 0 +P 3.2 tryptophanase
1612022..1612162 - 138 37201671 VVA1467 - - - H 1 1 hypothetical protein
1633763..1633963 + 198 37201687 VVA1482 - - - H 1 1 hypothetical protein
1636493..1637353 - 858 37201691 VVA1487 - - - + H 1 0 transcriptional regulator
1638314..1638505 - 189 37201693 VVA1488 - - - + H 1 0 hypothetical protein
1638527..1639534 + 1005 37201694 VVA1489 - - - + H 0 0 conserved hypothetical protein
1639502..1639684 - 180 37201695 VVA1490 - - - + H 2 2 +G 3.6 hypothetical protein
1641953..1643635 - 1680 37201698 VVA1493 - - - + H 1 0 hypothetical protein
1645750..1646472 - 720 37201701 VVA1496 - - - H 2 2 ABC-type antimicrobial peptide transport system, ATPase component
1646465..1647748 - 1281 37201702 VVA1497 - - - + H 0 0 ABC-type antimicrobial peptide transport system, permease component
1647751..1648965 - 1212 37201703 VVA1498 - - - + H 1 0 ABC-type antimicrobial peptide transport system, permease component
1648962..1650233 - 1269 37201704 VVA1499 - - - + H 1 0 outer membrane protein
1651469..1651681 + 210 37201706 VVA1501 - - - + H 1 0 hypothetical protein
1651674..1652051 + 375 37201707 VVA1502 - - - + H 0 0 conserved hypothetical protein
1653917..1654813 + 894 37201710 VVA1505 - - - + H 0 0 +C 3.3 ABC-type hydroxamate-dependent iron transport system, periplasmic component
1654810..1656807 + 1995 37201711 VVA1506 - - - + H 0 0 ABC-type hydroxamate-dependent iron transport system, permease component
1656970..1657935 + 963 37201712 VVA1507 - - - + H 0 0 transcriptional regulator
1658273..1660429 + 2154 37201713 VVA1508 - - - + H 2 0 +L 3.2 ferric aerobactin receptor precursor
1660689..1661543 - 852 37201714 VVA1509 - - - + H 0 0 fructose/tagatose bisphosphate aldolase
1662717..1663172 - 453 37201716 VVA1511 - - - + H 0 0 phosphotransferase system, mannose/fructose-specific component IIA
1663253..1664137 - 882 37201717 VVA1512 - - - + H 2 0 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID
1664127..1664984 - 855 37201718 VVA1513 - - - + H 1 0 phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
1665405..1666619 - 1212 37201720 VVA1515 - - - + H 0 0 predicted phosphosugar isomerase
1666580..1667887 - 1305 37201721 VVA1517 - - - + H 0 0 predicted tagatose 6-phosphate kinase
1666676..1666939 + 261 37201722 VVA1516 - - - + H 1 0 hypothetical protein
1667896..1668687 - 789 37201723 VVA1518 - - - + H 1 0 +H 3.0 transcriptional regulator of sugar metabolism
1720986..1721981 + 993 37201781 VVA1576 - - - - H 2 0 TRAP-type C4-dicarboxylate transport system, periplasmic component
1722584..1723864 + 1278 37201784 VVA1579 - - - - H 2 0 TRAP-type C4-dicarboxylate transport system, large permease component
1723873..1725033 + 1158 37201785 VVA1580 - - - - H 1 2 +CLTVY 6.5 -3.9 -3.4 4.3 7.2 probable galactonate dehydratase protein
1725037..1726725 + 1686 37201786 VVA1581 - - - - H 1 0 +I 4.6 putative dihydroxy-acid dehydratase
1728834..1729352 + 516 37201789 VVA1584 - - - - H 1 0 nicotinamidase-related amidase
1729521..1729634 + 111 37201790 VVA1585 - - - - H 2 0 transcriptional regulator
1729685..1729795 + 108 37201791 VVA1586 - - - - H 2 2 hypothetical protein
1753856..1754851 - 993 37201816 VVA1611 - - - + H 0 0 conserved hypothetical protein
1757096..1759147 - 2049 37201819 VVA1613 - - - + H 0 0 conserved hypothetical protein
1759216..1761414 - 2196 37201820 VVA1614 - - - + H 1 0 conserved hypothetical protein
1761469..1762653 - 1182 37201821 VVA1615 - - - + H 1 0 conserved hypothetical protein
1762817..1763578 - 759 37201822 VVA1616 - - - + H 0 0 dehydrogenase
1764787..1765803 - 1014 37201824 VVA1618 - - - + H 1 0 UDP-glucose 4-epimerase
1765806..1767434 - 1626 37201825 VVA1620 - - - + H 0 0 sulfate permease
1767364..1767606 + 240 37201826 VVA1619 - - - + H 2 0 hypothetical protein
1782730..1783941 - 1209 37201839 VVA1633 - - - + H 1 0 arylsulfatase regulator
1784103..1785596 + 1491 37201840 VVA1634 - - - + H 1 0 arylsulfatase A
1785593..1787059 + 1464 37201841 VVA1635 - - - + H 0 0 arylsulfatase A
1787136..1789712 - 2574 37201842 VVA1636 - - - + H 1 0 conserved hypothetical protein
1790023..1790727 + 702 37201843 VVA1637 - - - + H 1 0 conserved hypothetical protein
1790836..1791330 - 492 37201844 VVA1638 - - - + H 0 0 transcriptional regulator
1792188..1792376 - 186 37201847 VVA1641 - - - H 1 2 hypothetical protein
1813483..1814103 - 618 37201867 VVA1661 - - - + H 0 0 acetyltransferase
1815743..1817464 + 1719 37201869 VVA1663 - - - + H 0 0 hypothetical protein
1817561..1818808 - 1245 37201870 VVA1664 - - - + H 0 0 tRNA and rRNA cytosine-C5-methylase
1818932..1819066 + 132 37201871 VVA1665 - - - + H 0 0 hypothetical protein
1818947..1819795 - 846 37201872 VVA1666 - - - + H 0 0 transcriptional regulator
1820970..1822430 + 1458 37201874 VVA1668 - - - + H 0 0 putative PTS system, sucrose-specific IIBC component
1822551..1823654 + 1101 37201875 VVA1669 - - - + H 1 0 putative outer membrane protein
1823710..1824486 - 774 37201876 VVA1670 - - - + H 1 0 conserved hypothetical protein
1824687..1825301 - 612 37201877 VVA1671 - - - + H 0 0 fructose-2;6-bisphosphatase
1844992..1847427 - 2433 37201894 VVA1688 - - - + H 0 0 methyl-accepting chemotaxis protein
1847885..1848391 - 504 37201896 VVA1690 - - - + H 1 0 chemotaxis signal transduction protein
1848401..1850515 - 2112 37201897 VVA1691 - - - + H 1 2 +V 4.0 chemotaxis protein histidine kinase
1850550..1850909 - 357 37201898 VVA1692 - - - + H 0 2 +V 3.1 chemotaxis protein CheY
1850941..1851195 - 252 37201899 VVA1693 - - - + H 0 0 conserved hypothetical protein

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