Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Vibrio vulnificus CMCP6 chr. 2 (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
39995..40342 + 345 27358067 - VV20041 - - H 1 2 Predicted permease
89575..90405 + 828 27358107 - VV20083 - - - H 2 0 Transcriptional regulator
91049..91339 + 288 27358108 - VV20084 - - - H 2 2 +GT 4.7 3.1 Flp pilus assembly protein
91465..92175 + 708 27358109 - VV20085 - - - H 2 0 Unknown
92193..93503 + 1308 27358110 - VV20086 - - - H 0 0 Flp pilus assembly protein
93581..93964 + 381 27358111 - VV20087 - - - H 2 2 ATPase with chaperone activity
93964..95166 + 1200 27358112 - VV20088 - - - H 1 0 ATPase involved in chromosome partitioning
96428..97342 + 912 27358114 - VV20090 - - - H 2 0 Flp pilus assembly protein TadB
97807..98217 + 408 27358115 - VV20091 - - - H 2 2 +IM 3.0 4.7 Flp pilus assembly protein TadC
98249..99358 + 1107 27358116 - VV20092 - - - H 1 0 Flp pilus assembly protein TadD
99355..99882 + 525 27358117 - VV20093 - - - H 2 0 Unknown
99872..100453 + 579 27358118 - VV20094 - - - H 1 0 Conserved hypothetical protein
100455..101735 + 1278 27358119 - VV20095 - - - H 0 0 Flp pilus assembly protein TadG
101737..102303 + 564 27358120 - VV20096 - - - H 0 0 Outer membrane protein
102542..102922 - 378 27358121 - VV20097 - - - H 0 2 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
103087..104013 + 924 27358122 - VV20099 - - - H 0 0 Uncharacterized protein conserved in bacteria
150536..150769 + 231 27358162 - VV20140 - - - H 1 2 +C 4.3 Unknown
157184..158011 - 825 27358165 - VV20143 - - - H 1 0 +S 3.2 ABC-type phosphate transport system, periplasmic component
158151..158576 + 423 27358166 - VV20144 - - - H 1 0 Conserved hypothetical protein
158632..159357 - 723 27358167 - VV20145 - - - H 0 0 AraC-type DNA-binding domain-containing protein
201703..202155 + 450 27358202 - VV20180 - - - H 1 1 S-adenosylhomocysteine hydrolase
202758..202967 - 207 27358204 - VV20182 - - - H 2 2 +Y 5.0 Unknown
203025..204893 - 1866 27358205 - VV20183 - - - H 2 0 Deoxycytidylate deaminase
205022..205114 + 90 27358206 - VV20184 - - - H 2 2 +AEM -3.5 3.1 3.5 Conserved hypothetical protein
205402..205734 + 330 27358207 - VV20185 - - - H 2 2 Superfamily I DNA and RNA helicase
302145..302453 + 306 27358289 - VV20274 - - H 1 2 Unknown
302441..304429 + 1986 27358290 - VV20275 - - - H 0 0 FOG: GGDEF domain
304714..306579 - 1863 27358291 - VV20276 - - - H 2 0 Outer membrane receptor protein
307056..307970 + 912 27358292 - VV20277 - - - H 0 0 Transcriptional regulator
310922..311497 + 573 27358294 - VV20279 - - - H 1 0 +K 3.7 Uncharacterized protein conserved in bacteria
311664..312659 + 993 27358295 - VV20280 - - - H 1 0 D-alanine-D-alanine ligase
312956..313330 + 372 27358296 - VV20281 - - - H 2 1 Conserved hypothetical protein
314711..315052 - 339 27358299 - VV20284 - - H 2 2 Unknown
318237..318608 - 369 27358307 - VV20294 - - H 2 1 Mg-dependent DNase
324472..325005 - 531 27358317 - VV20306 - - H 2 2 Quinolinate synthase
325355..325621 + 264 27358319 - VV20308 - - - H 1 2 Predicted transcriptional regulator
326924..327976 - 1050 27358321 - VV20311 - - - H 1 0 Conserved hypothetical protein
328133..329014 - 879 27358322 - VV20312 - - - H 1 0 Conserved hypothetical protein
329651..331066 - 1413 27358324 - VV20314 - - - H 0 0 Signal transduction histidine kinase
331248..331574 - 324 27358325 - VV20315 - - - H 0 2 NAD/NADP transhydrogenase beta subunit
334806..335180 - 372 27358329 - VV20319 - - H 1 1 Conserved hypothetical protein
417066..417908 - 840 27358397 - VV20391 - - + H 0 0 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
418916..420379 - 1461 27358399 - VV20393 - - + H 0 0 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component
420543..421094 - 549 27358400 - VV20394 - - + H 0 2 +C 3.5 Response regulator
421280..422188 - 906 27358401 - VV20395 - - + H 0 0 Dienelactone hydrolase
422318..423283 - 963 27358402 - VV20396 - - + H 0 0 Anthranilate phosphoribosyltransferase
423350..424243 - 891 27358403 - VV20397 - - + H 2 0 Uroporphyrinogen-III methylase
424270..426915 - 2643 27358404 - VV20398 - - + H 1 0 Anaerobic dehydrogenase, typically selenocysteine-containing
452124..452540 - 414 27358423 - VV20419 - - - H 2 0 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein
452764..453348 - 582 27358424 - VV20420 - - - H 0 1 Polyribonucleotide nucleotidyltransferase
453455..453682 - 225 27358425 - VV20421 - - - H 1 2 +K 3.7 Transposase
453817..454326 - 507 27358426 - VV20422 - - - H 0 0 Conserved hypothetical protein
454323..454478 - 153 27358427 - VV20423 - - - H 1 2 +N 3.8 Conserved hypothetical protein
454484..454867 - 381 27358428 - VV20424 - - - H 2 2 +DY 3.2 3.4 Helicase subunit of the DNA excision repair complex
459349..460257 - 906 27358430 - VV20426 - - - H 0 0 NAD/NADP transhydrogenase beta subunit
460258..460548 - 288 27358431 - VV20427 - - - H 0 2 +GP 5.1 4.5 Uncharacterized conserved protein
460558..462297 - 1737 27358432 - VV20428 - - - H 0 0 Uncharacterized protein conserved in bacteria
462448..462927 - 477 27358433 - VV20429 - - - H 2 2 +MT 3.1 3.6 Hemolysin-coregulated protein
482165..482620 - 453 27358448 - VV20444 - - H 2 2 Uncharacterized protein conserved in bacteria
488711..489055 - 342 27358456 - VV20452 - - H 2 2 Conserved hypothetical protein
505945..507039 + 1092 27358472 - VV20469 - - + H 0 0 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component, eukaryotic type, alpha subunit
507032..508015 + 981 27358473 - VV20470 - - + H 1 0 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component, eukaryotic type, beta subunit
508012..509157 + 1143 27358474 - VV20471 - - + H 1 0 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase component
509371..510336 - 963 27358475 - VV20473 - - + H 1 0 Electron transfer flavoprotein, alpha subunit
510368..511144 - 774 27358476 - VV20474 - - + H 1 0 +V 3.5 Electron transfer flavoprotein, beta subunit
511365..513017 + 1650 27358477 - VV20476 - - + H 0 0 Dehydrogenase
541308..541511 + 201 27358488 - VV20487 - - + H 0 2 Unknown
541530..542288 - 756 27358489 - VV20488 - - + H 0 0 Dehydrogenase
542336..543325 - 987 27358490 - VV20489 - - + H 1 0 3-hydroxyisobutyrate dehydrogenase
543361..544488 - 1125 27358491 - VV20490 - - + H 0 0 Enoyl-CoA hydratase/carnithine racemase
544510..545307 - 795 27358492 - VV20491 - - + H 1 0 Enoyl-CoA hydratase/carnithine racemase
545334..546488 - 1152 27358493 - VV20492 - - + H 0 0 Acyl-CoA dehydrogenase
546526..548019 - 1491 27358494 - VV20493 - - + H 1 0 NAD-dependent aldehyde dehydrogenase
548126..549343 - 1215 27358495 - VV20494 - - + H 1 0 Acetyl-CoA acetyltransferase
549539..549928 + 387 27358496 - VV20495 - - + H 0 2 +R 4.2 Predicted transcriptional regulator
549994..551163 + 1167 27358497 - VV20496 - - + H 1 0 Acyl-CoA dehydrogenase
551202..552806 + 1602 27358498 - VV20497 - - + H 1 0 Acetyl-CoA carboxylase, carboxyltransferase component
552833..553642 + 807 27358499 - VV20498 - - + H 0 0 Enoyl-CoA hydratase/carnithine racemase
553639..554178 + 537 27358500 - VV20499 - - + H 1 0 Isopropylmalate/homocitrate/citramalate synthase
576437..576862 + 423 27358526 - VV20526 - - H 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase 1
626381..626803 - 420 27358567 - VV20570 - - H 1 1 Histone acetyltransferase HPA2
703192..703761 - 567 27358646 - VV20652 - - H 2 1 GTPase
704987..705481 + 492 27358648 - VV20655 - - H 1 2 Integrase
715669..715866 + 195 27358655 - VV20662 - - - H 1 2 Unknown
715970..721756 + 5784 27358656 - VV20663 - - - H 0 0 ATP-dependent exoDNAse, alpha subunit
721775..722146 - 369 27358657 - VV20664 - - - H 1 2 +R 3.1 Cysteinyl-tRNA synthetase
723614..723979 - 363 27358658 - VV20665 - - - H 2 2 +Y 3.1 Unknown
723983..724363 - 378 27358659 - VV20666 - - - H 0 2 +S 3.2 Unknown
725319..725558 + 237 27358660 - VV20667 - - - H 1 2 +Y 4.1 Integrase
726039..727223 + 1182 27358661 - VV20669 - - - H 1 0 Uncharacterized conserved protein
728749..729738 + 987 27358663 - VV20671 - - - H 1 0 Membrane protease subunit
729735..731078 + 1341 27358664 - VV20672 - - - H 1 0 Na+/H+ antiporter
733028..734005 - 975 27358667 - VV20676 - - - H 1 0 Uncharacterized conserved protein
735433..736671 + 1236 27358669 - VV20680 - - - H 2 0 Permease of the major facilitator superfamily
736672..737697 + 1023 27358670 - VV20681 - - - H 2 0 Unknown
737993..738175 - 180 27358671 - VV20682 - - - H 1 2 +K 5.3 Transposase
738895..739884 - 987 27358672 - VV20683 - - - H 1 0 Transcriptional regulator
742701..743576 + 873 27358676 - VV20687 - - - H 0 0 ABC-type sulfate transport system, permease component
745158..745373 + 213 27358679 - VV20691 - - - H 1 2 +S 3.9 Unknown
745859..746653 + 792 27358680 - VV20692 - - - H 2 0 NAD-dependent protein deacetylases, SIR2 family
747120..747272 - 150 27358681 - VV20693 - - - H 1 2 +MT 4.6 4.0 Transposase
747727..748773 + 1044 27358682 - VV20694 - - - H 1 1 Predicted permease
748979..749272 + 291 27358683 - VV20695 - - - H 1 2 +R 3.4 Transposase
749432..749860 + 426 27358684 - VV20697 - - - H 0 0 Uncharacterized conserved protein
983669..984007 + 336 27358878 - VV20909 - - H 2 2 Thymidylate kinase
984409..984975 - 564 27358879 - VV20910 - - H 2 1 Unknown
1046457..1046993 + 534 27358937 - VV20973 - - H 1 1 Uncharacterized protein conserved in bacteria
1064764..1066140 - 1374 27358950 - VV20986 - - + H 2 0 Response regulator
1066279..1068339 + 2058 27358951 - VV20987 - - + H 1 0 Signal transduction histidine kinase
1068393..1068812 - 417 27358952 - VV20988 - - + H 1 0 Unknown
1071545..1072240 + 693 27358955 - VV20991 - - + H 0 0 Response regulator
1073576..1074436 - 858 27358957 - VV20993 - - + H 1 0 Transcriptional regulator
1074536..1075600 + 1062 27358958 - VV20994 - - + H 0 0 Multidrug resistance efflux pump
1076742..1077776 - 1032 27358960 - VV20996 - - + H 1 0 Methionine synthase II
1083544..1084236 - 690 27358965 - VV21004 - - + H 1 0 ABC-type antimicrobial peptide transport system, ATPase component
1084259..1085542 - 1281 27358966 - VV21005 - - + H 1 0 ABC-type antimicrobial peptide transport system, permease component
1086756..1088027 - 1269 27358968 - VV21007 - - + H 1 0 Outer membrane protein
1088020..1089156 - 1134 27358969 - VV21008 - - + H 0 0 Membrane-fusion protein
1090038..1090772 + 732 27358971 - VV21010 - - + H 0 0 +C 3.6 Conserved hypothetical protein
1090913..1091680 + 765 27358972 - VV21011 - - + H 0 0 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component
1091716..1092594 + 876 27358973 - VV21012 - - + H 0 0 ABC-type Fe3+-hydroxamate transport system, periplasmic component
1092591..1094588 + 1995 27358974 - VV21013 - - + H 2 0 +L 3.3 ABC-type Fe3+-siderophore transport system, permease component
1094751..1095716 + 963 27358975 - VV21014 - - + H 0 0 Transcriptional regulator
1098473..1099327 - 852 27358977 - VV21017 - - + H 0 0 Fructose/tagatose bisphosphate aldolase
1099318..1100511 - 1191 27358978 - VV21018 - - + H 2 0 N-acetylglucosamine-6-phosphate deacetylase
1100501..1100956 - 453 27358979 - VV21019 - - + H 1 0 Phosphotransferase system, mannose/fructose-specific component IIA
1101911..1102687 - 774 27358981 - VV21021 - - + H 1 0 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
1102704..1103177 - 471 27358982 - VV21022 - - + H 0 0 +V 3.2 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
1103189..1104364 - 1173 27358983 - VV21023 - - + H 1 0 Predicted phosphosugar isomerase
1104364..1105671 - 1305 27358984 - VV21024 - - + H 1 0 +H 3.0 Predicted tagatose 6-phosphate kinase
1105680..1106468 - 786 27358985 - VV21025 - - + H 1 0 Transcriptional regulator of sugar metabolism
1161928..1162404 + 474 27359040 - VV21081 - - H 1 1 Phosphotransferase system mannitol/fructose-specific IIA domain
1169453..1171504 - 2049 27359048 - VV21090 - - + H 1 0 Conserved hypothetical protein
1171573..1173759 - 2184 27359049 - VV21091 - - + H 0 0 Conserved hypothetical protein
1175175..1175936 - 759 27359051 - VV21093 - - + H 1 0 Dehydrogenase
1176067..1177128 - 1059 27359052 - VV21094 - - + H 0 0 Galactose-1-phosphate uridylyltransferase
1177145..1178161 - 1014 27359053 - VV21095 - - + H 2 0 UDP-glucose 4-epimerase
1227530..1229128 - 1596 27359090 - VV21134 - - + H 0 0 Chaperonin GroEL
1229620..1230240 - 618 27359092 - VV21136 - - + H 0 0 Acetyltransferase
1230611..1231696 + 1083 27359093 - VV21137 - - + H 0 0 Uncharacterized conserved protein
1231880..1233601 + 1719 27359094 - VV21138 - - + H 0 0 Conserved hypothetical protein
1233698..1234912 - 1212 27359095 - VV21139 - - + H 0 0 tRNA and rRNA cytosine-C5-methylase
1236171..1237082 + 909 27359097 - VV21141 - - + H 2 0 Predicted sugar phosphate isomerase
1237129..1238568 + 1437 27359098 - VV21142 - - + H 1 0 Phosphotransferase system IIC component, glucose/maltose/N-acetylglucosamine-specific
1238735..1239793 + 1056 27359099 - VV21143 - - + H 1 0 Outer membrane protein
1247440..1247856 + 414 27359106 - VV21150 - - - H 1 0 +K 3.5 Uncharacterized protein conserved in bacteria
1247959..1248936 - 975 27359107 - VV21151 - - - H 0 0 +R 3.5 Transposase
1249371..1249832 + 459 27359108 - VV21153 - - - H 2 1 +I 3.0 Conserved hypothetical protein
1249825..1250871 + 1044 27359109 - VV21154 - - - H 2 0 Serine/threonine protein kinase
1251659..1252753 - 1092 27359110 - VV21156 - - - H 1 0 Membrane-fusion protein
1283759..1284610 + 849 27359138 - VV21186 - - + H 1 0 +R 3.4 Transcriptional regulator
1284734..1285435 + 699 27359139 - VV21187 - - + H 0 0 Conesrved hypothetical protein
1285446..1286141 + 693 27359140 - VV21188 - - + H 1 0 ABC-type antimicrobial peptide transport system, ATPase component
1286129..1287394 + 1263 27359141 - VV21189 - - + H 0 0 ABC-type transport system, involved in lipoprotein release, permease component
1288177..1289511 + 1332 27359143 - VV21191 - - + H 1 0 +W 5.4 Predicted Zn-dependent hydrolase of the beta-lactamase fold
1420351..1421304 + 951 27359241 - VV21294 - - + H 1 0 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
1421316..1422302 + 984 27359242 - VV21295 - - + H 1 0 ABC-type oligopeptide transport system, ATPase component
1422365..1425814 + 3447 27359243 - VV21296 - - + H 1 0 Unknown
1426053..1427063 - 1008 27359244 - VV21297 - - + H 0 0 Transcriptional regulator
1427476..1429323 + 1845 27359245 - VV21298 - - + H 1 0 Exo-beta-1,3-glucanase
1429428..1431029 + 1599 27359246 - VV21300 - - + H 0 0 Beta-glucanase/Beta-glucan synthetase
1432859..1433728 - 867 27359248 - VV21302 - - + H 0 0 AraC-type DNA-binding domain-containing protein
1446375..1448072 - 1695 27359261 - VV21318 - - + H 1 0 Pseudouridylate synthase, 23S RNA-specific
1448159..1449127 - 966 27359262 - VV21319 - - + H 1 0 FOG: GGDEF domain
1449259..1452360 - 3099 27359263 - VV21320 - - + H 1 0 Cation/multidrug efflux pump
1452357..1453679 - 1320 27359264 - VV21321 - - + H 1 0 Membrane-fusion protein
1453666..1454322 - 654 27359265 - VV21322 - - + H 1 0 +M 4.0 Transcriptional regulator
1454446..1455453 - 1005 27359266 - VV21323 - - + H 1 0 Transcriptional regulator
1458267..1459241 - 972 27359269 - VV21326 - - + H 0 0 ABC-type sugar transport system, periplasmic component
1459600..1462593 - 2991 27359270 - VV21327 - - + H 1 0 Beta-galactosidase/beta-glucuronidase
1532211..1532525 - 312 27359327 - VV21389 - - H 1 1 Unknown
1574601..1575044 + 441 27359366 - VV21431 - - H 1 1 Transcriptional regulator
1580169..1580300 + 129 27359372 - VV21439 - - + H 1 2 +I -3.3 Conserved hypothetical protein
1580460..1580663 + 201 27359373 - VV21441 - - + H 2 2 Conserved hypothetical protein
1580950..1581171 + 219 27359374 - VV21442 - - + H 2 2 +CP 3.2 3.9 Unknown
1583607..1583822 + 213 27359376 - VV21449 - - + H 1 2 +C 3.3 Unknown
1583806..1584240 - 432 27359377 - VV21450 - - + H 2 2 +PR 4.5 3.5 Cell wall-associated hydrolase
1623291..1623701 - 408 27359412 - VV21487 - - - H 2 2 +N 4.1 Unknown
1624679..1624942 - 261 27359414 - VV21489 - - - H 2 2 Hypothetical protein predicted by GeneMark
1625180..1625914 - 732 27359415 - VV21491 - - - H 1 1 +C 3.2 Uncharacterized conserved protein
1626504..1626782 + 276 27359417 - VV21493 - - - H 2 2 +A -3.1 Plasmid stabilization system protein
1627218..1627475 - 255 27359418 - VV21495 - - - H 2 2 +V 4.2 Unknown
1627485..1627748 - 261 27359419 - VV21496 - - - H 2 2 +S 3.2 Hypothetical protein predicted by GeneMark
1628272..1629918 - 1644 27359420 - VV21497 - - - H 2 0 ATPase involved in DNA repair
1640242..1640601 - 357 27359430 - VV21510 - - H 1 1 Response regulator
1724928..1725560 + 630 27359489 - VV21570 - - - H 2 0 +I 3.1 DNA-binding HTH domain-containing protein
1728169..1729509 + 1338 27359492 - VV21573 - - - H 1 0 Membrane-fusion protein
1729690..1730013 - 321 27359493 - VV21574 - - - H 2 2 +F 3.1 Unknown
1730087..1731400 - 1311 27359494 - VV21575 - - - H 1 0 Membrane protein involved in the export of O-antigen and teichoic acid
1731411..1732442 - 1029 27359495 - VV21576 - - - H 0 0 Glycosyltransferase
1732439..1733272 - 831 27359496 - VV21577 - - - H 2 1 +KN 3.1 3.7 Unknown
1733425..1734465 - 1038 27359497 - VV21578 - - - H 1 0 Glycosyltransferase
1734489..1736669 - 2178 27359498 - VV21579 - - - H 0 0 ATPase involved in chromosome partitioning
1736689..1737180 - 489 27359499 - VV21580 - - - H 0 1 Periplasmic protein involved in polysaccharide export
1737236..1738456 - 1218 27359500 - VV21581 - - - H 0 0 Conserved hypothetical protein
1738485..1739885 - 1398 27359501 - VV21582 - - - H 0 0 Sugar transferase involved in lipopolysaccharide synthesis
1764701..1765114 - 411 27359527 - VV21612 - - H 1 1 Biopolymer transport protein
1771464..1771889 + 423 27359536 - VV21621 - - H 1 1 Universal stress protein UspA
1781630..1782124 - 492 27359543 - VV21629 - - H 1 1 Conserved hypothetical protein

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