Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Thermoplasma volcanium (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
45165..45689 - 522 13540874 - TVN0043 L COG0675 H 2 2 Predicted inactivated transposase
110650..110910 - 258 13540936 - TVN0105 S COG1343 - H 2 2 +I 3.5 Uncharacterized conserved protein
110910..111878 - 966 13540937 - TVN0106 S COG1518 - H 2 0 +N 3.4 Uncharacterized conserved protein
111880..112590 - 708 13540938 - TVN0107 - - - H 2 0 Uncharacterized protein
112611..113768 - 1155 13540939 - TVN0108 S COG1332 - H 2 0 +N 3.2 Uncharacterized conserved protein
113769..114659 - 888 13540940 - TVN0109 S COG1567 - H 2 0 +N 3.0 Uncharacterized conserved protein
114661..115350 - 687 13540941 - TVN0110 S COG1337 - H 1 1 Uncharacterized conserved protein
115343..115783 - 438 13540942 - TVN0111 S COG1421 - H 2 2 Uncharacterized conserved protein
115828..118155 - 2325 13540943 - TVN0112 R COG1353 - H 2 0 Predicted hydrolase (HD superfamily)
118145..118858 - 711 13540944 - TVN0113 S COG1583 - H 2 0 +N 3.3 Uncharacterized conserved protein
119105..120325 + 1218 13540945 - TVN0114 S COG1517 - H 2 0 +N 3.2 Uncharacterized conserved protein
142185..142586 + 399 13540963 - TVN0132 R COG1545 H 1 2 Predicted nucleic-acid-binding protein
149208..149603 + 393 13540974 - TVN0143 - - H 1 2 Predicted membrane protein
208707..209075 + 366 13541035 - TVN0204 - - H 1 2 Uncharacterized conserved protein
209230..210789 + 1557 13541036 - TVN0205 G COG1653 - H 1 0 Sugar-binding protein
210797..211687 + 888 13541037 - TVN0206 G COG1175 - H 2 0 +I 4.0 ABC-type sugar transporter, permease component
211689..212495 + 804 13541038 - TVN0207 G COG0395 - H 2 0 Sugar permease
212538..213590 + 1050 13541039 - TVN0208 N COG3839 - H 2 0 ABC-type sugar transporter, ATPase component
215286..218327 + 3039 13541040 - TVN0209 G COG0383 - H 2 0 Alpha-mannosidase
322589..322900 + 309 13541144 - TVN0313 S COG1460 H 1 2 Uncharacterized conserved protein
326039..326443 + 402 13541148 - TVN0317 K COG3432 H 1 2 Predicted transcription regulator
378387..378848 - 459 13541219 - TVN0388 S COG1814 H 1 1 Uncharacterized conserved membrane protein
380519..380863 + 342 13541222 - TVN0391 - - H 1 1 Uncharacterized conserved protein
422270..422635 + 363 13541264 - TVN0433 - - H 1 2 Predicted membrane protein
434445..434747 - 300 13541277 - TVN0446 S COG3254 H 1 2 Uncharacterized conserved protein
461113..461535 + 420 13541305 - TVN0474 - - H 2 1 Uncharacterized conserved protein
526852..527241 + 387 13541368 - TVN0537 J COG0231 H 1 2 Translation factor eIF-5A
641348..641800 + 450 13541477 - TVN0646 T COG0589 H 1 1 Nucleotide-binding protein (UspA-related)
642101..642496 + 393 13541479 - TVN0648 - - H 1 1 Uncharacterized conserved protein
674771..675523 + 750 13541508 - TVN0677 R COG0730 H 1 2 Predicted permease
678392..678982 - 588 13541510 - TVN0679 - - H 2 2 Uncharacterized protein
687568..688074 - 504 13541514 - TVN0683 - - H 1 1 Uncharacterized protein
699600..700142 + 540 13541526 - TVN0695 L COG1961 H 1 2 Site-specific recombinase, DNA invertase Pin-related
700497..700679 + 180 13541527 - TVN0696 L COG1474 + H 1 2 AAA superfamily ATPase
702334..702900 - 564 13541528 - TVN0697 - - + H 0 1 Uncharacterized protein
703424..703840 - 414 13541529 - TVN0698 - - + H 2 2 Uncharacterized protein
703837..704973 - 1134 13541530 - TVN0699 - - + H 2 2 Uncharacterized protein
705358..705711 - 351 13541531 - TVN0700 - - + H 2 2 +P 3.6 Uncharacterized protein
705804..706346 - 540 13541532 - TVN0701 - - + H 2 2 +HP 3.1 3.8 Uncharacterized protein
707052..708014 + 960 13541533 - TVN0702 - - + H 1 0 Uncharacterized protein
714418..714843 - 423 13541540 - TVN0709 - - H 1 1 Uncharacterized conserved protein
720480..720869 + 387 13541543 - TVN0712 L COG0675 H 1 2 Predicted inactivated transposase
727696..728988 - 1290 13541551 - TVN0720 - - - H 2 0 Predicted methyltransferase
730400..731305 + 903 13541552 - TVN0721 G COG0477 - H 0 0 Predicted permease (major facilitator superfamily)
734352..734942 + 588 13541554 - TVN0723 L COG0582 - H 2 1 Integrase/recombinase
737684..738181 - 495 13541555 - TVN0724 S COG3465 - H 2 0 Uncharacterized conserved protein
739837..740145 - 306 13541556 - TVN0725 L COG1002 - H 2 2 +Y 3.0 Type II restriction enzyme, methylase subunit
740668..741039 + 369 13541557 - TVN0726 L COG0582 - H 1 2 Integrase/recombinase
789560..790006 + 444 13541604 - TVN0773 I COG2185 H 1 2 Methylmalonyl-CoA mutase, cobalamin-binding subunit
870804..871982 + 1176 13541666 - TVN0835 C COG0674 + H 1 0 Pyruvate:ferredoxin oxidoreductase, alpha subunit
871982..872869 + 885 13541667 - TVN0836 C COG1013 + H 2 0 2-ketovalerate:ferredoxin oxidoreductase, beta subunit
872883..873440 - 555 13541668 - TVN0837 Q COG0500 + H 0 0 SAM-dependent methyltransferase
873691..874800 + 1107 13541669 - TVN0838 R COG0535 + H 0 0 Predicted coenzyme PQQ synthesis protein E
875243..876487 - 1242 13541671 - TVN0840 C COG0578 + H 0 0 Glycerol-3-phosphate dehydrogenase
876539..877129 - 588 13541672 - TVN0841 C COG0584 + H 0 0 Predicted glycerophosphoryl diester phosphodiesterase
878825..879025 - 198 13541675 - TVN0844 G COG0477 + H 1 2 +L 3.2 Uncharacterized protein
879099..879635 - 534 13541676 - TVN0845 H COG1056 + H 0 0 +H 3.1 Nicotinamide mononucleotide adenylyltransferase
879862..881751 + 1887 13541677 - TVN0846 C COG0674 + H 0 0 2-oxoacid--ferredoxin oxidoreductase, alpha subunit
881741..882664 + 921 13541678 - TVN0847 C COG1013 + H 1 0 2-oxoacid:ferredoxin oxidoreductase, beta subunit
882679..883839 - 1158 13541679 - TVN0848 E COG0436 + H 0 0 Aspartate aminotransferase
899600..900412 + 810 13541700 - TVN0869 M COG0463 - H 2 0 Glycosyltransferase involved in cell wall biogenesis
901335..901553 + 216 13541701 - TVN0870 L COG3328 - H 2 2 +D 3.2 Predicted inactivated transposase
902108..902620 + 510 13541702 - TVN0871 M COG0463 - H 2 0 +N 3.3 Predicted glycosyltransferase involved in cell wall biogenesis
903798..904250 + 450 13541703 - TVN0872 M COG0438 - H 2 1 Predicted glycosyltransferase
904721..905596 - 873 13541704 - TVN0873 Q COG0500 - H 2 0 Predicted SAM-dependent methyltransferase
908448..908765 + 315 13541705 - TVN0874 L COG0582 - H 2 2 +I 3.0 Integrase/recombinase
910396..911451 - 1053 13541707 - TVN0876 M COG0463 - H 2 0 +N 3.4 Glycosyltransferase involved in cell wall biogenesis
911574..912704 - 1128 13541708 - TVN0877 M COG0438 - H 2 0 Predicted glycosyltransferase
913498..916074 - 2574 13541710 - TVN0879 - - - H 2 0 Predicted membrane protein
917701..918762 - 1059 13541711 - TVN0880 M COG0438 - H 2 0 Predicted glycosyltransferase
919339..920010 + 669 13541712 - TVN0881 Q COG0500 - H 2 0 Predicted SAM-dependent methyltransferase
922748..923542 - 792 13541715 - TVN0884 M COG0463 - H 0 0 Glycosyltransferase involved in cell wall biogenesis
923753..924280 - 525 13541716 - TVN0885 - - - H 1 0 Predicted membrane protein
924334..925968 - 1632 13541717 - TVN0886 S COG3463 - H 1 0 +Y 3.0 Predicted membrane protein
926017..926940 + 921 13541718 - TVN0887 M COG0451 - H 0 0 Nucleoside-diphosphate-sugar epimerase
928372..929892 + 1518 13541720 - TVN0889 R COG2244 - H 0 0 Membrane protein involved in the export of O-antigen and teichoic acid
930644..932389 + 1743 13541721 - TVN0890 E COG1506 - H 0 0 Acylaminoacyl-peptidase
933646..934671 + 1023 13541722 - TVN0891 M COG0438 - H 2 0 Predicted glycosyltransferase
935209..936231 - 1020 13541723 - TVN0892 M COG0463 - H 2 0 Glycosyltransferase involved in cell wall biogenesis
1007925..1008755 + 828 13541789 - TVN0958 R COG1277 - H 1 0 Permease component of an ABC-transporter
1010767..1011675 + 906 13541792 - TVN0961 - - - H 0 0 Uncharacterized conserved protein
1011780..1012727 + 945 13541793 - TVN0962 S COG2246 - H 1 0 Uncharacterized conserved membrane protein
1014789..1016708 + 1917 13541795 - TVN0964 - - - H 1 0 +F 3.2 Predicted membrane protein
1016719..1017915 - 1194 13541796 - TVN0965 R COG2391 - H 0 0 Predicted transporter component
1179749..1180156 - 405 13541958 - TVN1127 K COG1522 H 1 2 Transcription regulator
1314741..1315115 - 372 13542082 - TVN1251 K COG0640 H 2 2 Predicted transcription regulator
1377296..1377622 - 324 13542142 - TVN1311 I COG3255 H 1 1 Predicted sterol carrier protein
1395987..1396322 - 333 13542158 - TVN1327 - - H 1 2 Uncharacterized protein
1463374..1464819 - 1443 13542221 - TVN1390 R COG0719 + H 1 0 Predicted membrane component of an uncharacterized iron-regulated ABC-type transporter
1464820..1465560 - 738 13542222 - TVN1391 R COG0396 + H 1 0 Iron-regulated ABC transporter ATPase subunit
1466311..1466613 + 300 13542224 - TVN1393 R COG2151 + H 1 2 +P 3.2 Predicted aromatic ring hydroxylating enzyme
1466683..1467237 + 552 13542225 - TVN1394 K COG2101 + H 1 0 Transcription initiation factor TFIID
1467238..1469217 - 1977 13542226 - TVN1395 C COG0247 + H 0 0 Fe-S oxidoreductase
1470916..1471506 - 588 13542229 - TVN1398 - - + H 0 1 Uncharacterized protein
1484829..1485662 + 831 13542242 - TVN1411 L COG3415 - H 2 0 Predicted inactivated transposase
1487043..1487993 + 948 13542244 - TVN1413 L COG0863 - H 1 0 Adenine-specific DNA methylase
1488041..1488832 + 789 13542245 - TVN1414 - - - H 1 0 Uncharacterized protein
1489932..1490552 + 618 13542246 - TVN1415 - - - H 2 1 Uncharacterized protein
1490633..1491781 + 1146 13542247 - TVN1416 L COG0863 - H 2 0 Adenine-specific DNA methylase
1494356..1494658 + 300 13542249 - TVN1418 - - H 1 2 Uncharacterized protein
1497152..1497634 + 480 13542252 - TVN1421 S COG1547 H 1 1 Uncharacterized conserved protein
1538342..1538689 - 345 13542292 - TVN1461 - - H 1 2 Uncharacterized protein
1548715..1549047 - 330 13542301 - TVN1470 - - H 1 2 Predicted membrane protein
1560863..1561618 - 753 13542311 - TVN1480 D COG1192 H 1 2 ATPase involved in chromosome partitioning

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