Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Salmonella typhimurium LT2 (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
32545..32994 - 447 16763419 - STM0029 - - - H 2 2 putative transcription regulator
33364..34368 + 1002 16763420 - STM0030 K COG0583 - H 2 0 putative transcriptional regulator, LysR family
34376..34816 - 438 16763421 - STM0031 K COG3710 - H 2 2 putative transcription regulator
35339..37057 + 1716 16763422 - STM0032 - - - H 0 0 putative arylsulfatase
37103..38674 - 1569 16763423 - STM0033 F COG0737 - H 0 0 putative 5'-nucleotidase
38773..39534 - 759 16763424 - STM0034 - - - H 1 0 +NY 3.3 3.3 putative outer membrane or exported protein
116816..117235 + 417 16763490 - STM0100 - - H 1 2 putative cytoplasmic protein
195983..196330 - 345 16763557 yacC STM0167 - - H 1 2 putative periplasmic protein
218309..220783 + 2472 16763579 hrpB STM0189 L COG1643 + H 0 0 helicase, ATP-dependent
220923..223445 + 2520 16763580 mrcB STM0190 M COG0744 + H 0 0 transpeptidase of penicillin-binding protein 1b (peptidoglycan synthetase)
225976..226773 + 795 16763582 fhuC STM0192 P COG1120 + H 1 0 ABC superfamily (atp_bind), hydroxymate-dependent iron transport
226773..227663 + 888 16763583 fhuD STM0193 P COG0614 + H 0 0 ABC superfamily (bind _prot), hydroxamate-dependent iron uptake
227660..229717 + 2055 16763584 fhuB STM0194 P COG0609 + H 1 0 ABC superfamily (membrane), hydroxamate-dependent iron uptake
318153..318536 + 381 16763661 - STM0278 - - H 2 1 putative periplasmic protein
322420..323193 + 771 16763666 - STM0283 - - H 2 1 putative inner membrane protein
328955..329476 + 519 16763671 - STM0288 - - H 1 1 putative cytoplasmic protein
337829..338275 + 444 16763676 - STM0293 - - - H 2 2 +N 4.4 putative cytoplasmic protein
338838..339275 + 435 16763677 - STM0294 - - - H 2 2 +I 3.0 putative cytoplasmic protein
340044..340352 + 306 16763678 - STM0295 - - - H 2 2 +N 3.8 putative cytoplasmic protein
340454..340702 - 246 16763679 - STM0296 - - - H 0 2 putative cytoplasmic protein
340755..340952 + 195 16763680 - STM0297 L COG2801 - H 1 2 +LRT -3.6 3.8 3.1 putative transposase
341178..341459 + 279 16763681 - STM0298 L COG2801 - H 1 2 putative integrase core domain
342209..342721 + 510 16763682 safA STM0299 - - - H 1 1 +S 3.6 putative outer membrane protein
342829..343542 + 711 16763683 safB STM0300 N COG3121 - H 0 0 putative fimbriae assembly chaparone
379705..381030 - 1323 16763717 stbD STM0337 - - - H 0 0 putative fimbriae; usher
383580..384341 - 759 16763719 stbB STM0339 N COG3121 - H 1 0 putative fimbriae; chaparone
384403..384939 - 534 16763720 stbA STM0340 N COG3539 - H 1 2 +ST 3.0 4.0 putative fimbriae; major subunit
385573..386337 + 762 16763721 - STM0341 - - - H 2 0 putative inner membrane protein
386310..386609 + 297 16763722 - STM0342 - - - H 2 2 putative periplasmic protein
387109..388683 + 1572 16763723 - STM0343 T COG2200 - H 0 0 putative Diguanylate cyclase/phosphodiesterase domain 1
388783..389526 + 741 16763724 - STM0344 - - - H 2 0 putative response regulator
389499..389987 + 486 16763725 - STM0345 - - - H 2 2 putative inner membrane protein
390388..390912 + 522 16763726 - STM0346 - - - H 2 0 +FS 3.1 3.2 putative outer membrane protein; Homolog of ail and ompX
391056..391697 + 639 16763727 - STM0347 K COG2771 - H 2 0 putative response regulator
391708..391932 + 222 16763728 - STM0348 - - - H 2 2 +GIM -3.2 4.8 3.4 putative inner membrane protein
391990..392349 + 357 16763729 - STM0349 - - - H 1 2 putative outer membrane lipoprotein
527401..527952 - 549 16763852 maa STM0472 R COG0110 - H 0 1 maltose o-acetyltransferase
528131..528349 - 216 16763853 hha STM0473 - - - H 2 2 +G -3.2 hemolysin expression modulating protein (involved in environmental regulation of virulence factors)
528377..528751 - 372 16763854 ybaJ STM0474 - - - H 2 2 +N 3.7 putative cytoplasmic protein
566439..567125 + 684 16763887 ybbA STM0507 R COG1136 H 1 2 putative ABC superfamily (atp_bind) transporter
610256..610888 - 630 16763929 fimZ STM0549 T COG2197 - H 2 0 fimbrial protein Z, putative transcriptional regulator (LuxR/UhpA family)
611492..612214 - 720 16763930 fimY STM0550 - - - H 0 0 putative regulatory protein
612233..612544 - 309 16763931 - STM0551 - - - H 1 2 putative Diguanylate cyclase/phosphodiesterase domain 0
612706..613302 - 594 16763932 fimW STM0552 - - - H 2 0 +H 3.4 putative fimbrial protein
613593..613781 - 186 16763933 - STM0554 - - - H 1 2 +H 4.5 homology to integrase protein of phage
614199..614417 - 216 16763934 - STM0556 L COG2963 - H 1 2 +S 6.8 putative transposase
614804..616456 - 1650 16763935 - STM0557 - - - H 2 0 putative inner membrane protein
616437..617363 - 924 16763936 yfdH STM0558 M COG0463 - H 2 0 putative glycosyltransferase
617360..617722 - 360 16763937 rfbI STM0559 S COG2246 - H 1 2 +F 4.6 putative glycosyl translocase
618590..618919 - 327 16763938 - STM0561 T COG0642 - H 0 2 Sensor protein
651576..652565 - 987 16763968 fepG STM0591 P COG0609 + H 0 0 ABC superfamily (membrane), ferric enterobactin transporter
652565..653572 - 1005 16763969 fepD STM0592 P COG0609 + H 1 0 ABC superfamily (membrane), ferric enterobactin (enterochelin) transporter
653683..654927 + 1242 16763970 ybdA STM0593 G COG0477 + H 0 0 putative POT family transport protein
654990..655946 - 954 16763971 fepB STM0594 P COG0614 + H 0 0 ABC superfamily (peri_perm), ferric enterobactin (enterochelin) tranporter
656255..657430 + 1173 16763972 entC STM0595 H COG1169 + H 0 0 isochorismate synthetase, enterochelin biosynthesis
657440..659050 + 1608 16763973 entE STM0596 Q COG1021 + H 0 0 2,3-dihydroxybenzoate-AMP ligase
659064..659921 + 855 16763974 entB STM0597 Q COG1535 + H 0 0 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase
659921..660676 + 753 16763975 entA STM0598 Q COG1028 + H 0 0 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase
660679..661092 + 411 16763976 ybdB STM0599 Q COG2050 + H 0 0 putative protein PaaI, possibly involved in aromatic compounds catabolism
661274..663379 + 2103 16763977 cstA STM0600 T COG1966 + H 0 0 carbon starvation protein
682406..683302 - 894 16763996 citG STM0619 H COG1767 + H 1 0 putative modifier of citrate lyase protein
683274..683825 - 549 16763997 citX STM0620 H COG3697 + H 1 1 putative cytoplasmic protein
683829..685358 - 1527 16763998 citF STM0621 C COG3051 + H 0 0 bifunctional citrate lyase alpha chain/citrate-ACP transferase
685368..686276 - 906 16763999 citE STM0622 G COG2301 + H 1 0 citrate lyase beta chain (acyl lyase subunit)
686273..686569 - 294 16764000 citD STM0623 C COG3052 + H 0 2 citrate lyase acyl carrier protein (gamma chain)
784017..785168 + 1149 16764089 - STM0719 M COG0562 - H 2 0 putative UDP-galactopyranose mutase
785165..786061 + 894 16764090 - STM0720 R COG1216 - H 2 0 putative glycosyl transferase
786074..787207 + 1131 16764091 - STM0721 M COG0438 - H 2 0 putative glycosyl transferase
787336..788106 + 768 16764092 - STM0722 M COG1682 - H 2 0 +I 3.4 putative ABC transporter permease protein
788110..788820 + 708 16764093 - STM0723 G COG1134 - H 2 1 putative ABC-type polysaccharide/polyol phosphate transport system, ATPase component
788914..790692 + 1776 16764094 - STM0724 - - - H 2 0 putative glycosyltransferase, cell wall biogenesis
790885..791718 + 831 16764095 - STM0725 M COG0463 - H 2 1 +N 3.7 putative glycosyltransferase, cell wall biogenesis
791776..793671 + 1893 16764096 - STM0726 - - - H 2 0 putative glycosyl transferase
797197..797583 + 384 16764101 - STM0731 - - H 1 2 putative inner membrane protein
824918..825463 - 543 16764126 - STM0761 C COG1838 - H 1 2 fumarate hydratase Class I anaerobic
825478..826323 - 843 16764127 - STM0762 C COG1951 - H 2 0 fumarate hydratase, alpha subunit
826492..827343 + 849 16764128 - STM0763 K COG0583 - H 2 0 transcriptional regulator, lysR family
827344..828327 - 981 16764129 - STM0764 K COG0583 - H 2 0 transcriptional regulator, lysR family
828571..829818 + 1245 16764130 - STM0765 P COG0471 - H 2 1 putative cation transporter
851841..853064 + 1221 16764151 hutI STM0787 Q COG1228 + H 0 0 Imidazolonepropionase
853061..854002 + 939 16764152 hutG STM0788 E COG0010 + H 1 0 formimionoglutamate hydrolase
854047..854772 + 723 16764153 hutC STM0789 K COG2188 + H 0 0 histidine utilization repressor
856655..858175 + 1518 16764154 hutH STM0791 E COG2986 + H 0 0 histidine ammonia lyase
858260..858736 - 474 16764155 ybhB STM0792 R COG1881 + H 0 0 putative Phospholipid-binding protein
858794..860083 - 1287 16764156 bioA STM0793 H COG0161 + H 0 0 7,8-diaminopelargonic acid synthetase
861207..862364 + 1155 16764158 bioF STM0795 H COG0156 + H 0 0 7-keto-8-aminopelargonic acid synthetase
862348..863103 + 753 16764159 bioC STM0796 Q COG0500 + H 0 0 biotin biosynthesis; reaction prior to pimeloyl CoA
863096..863782 + 684 16764160 bioD STM0797 H COG0132 + H 0 0 dethiobiotin synthetase
864433..866454 + 2019 16764161 uvrB STM0798 L COG0556 + H 0 0 UvrB with UvrAC is a DNA excision repair enzyme
926181..926696 + 513 16764216 - STM0854 G COG2301 - H 2 0 putative cytoplasmic protein
926614..927468 + 852 16764217 - STM0855 C COG2086 - H 2 0 putative electron transfer flavoprotein beta subunit
927479..928426 + 945 16764218 - STM0856 C COG2025 - H 2 0 putative electron transfer flavoprotein alpha subunit
928720..929883 + 1161 16764219 - STM0857 I COG1960 - H 1 0 putative acyl-CoA dehydrogenase
930332..932017 + 1683 16764220 - STM0858 C COG0644 - H 1 0 putative dehydrogenase (flavoproteins)
932023..932913 - 888 16764221 - STM0859 K COG0583 - H 2 0 putative transcriptional regulator, LysR family
933178..933603 - 423 16764222 - STM0860 G COG2610 - H 1 2 +F 3.5 putative inner membrane protein
955899..956219 + 318 16764246 - STM0885 G COG3414 H 2 2 putative inner membrane protein; homology to SgaT from Vibrio
966309..966725 - 414 16764258 - STM0897 - - H 2 2 Fels-1 prophage
967911..968606 - 693 16764259 - STM0898 K COG2932 H 1 1 Fels-1 prophage; predicted transcriptional regulator
976812..977156 + 342 16764268 - STM0906 - - H 1 2 Fels-1 prophage
1025166..1025624 + 456 16764308 tnpA_1 STM0946 L COG1943 H 1 2 IS200 transposase
1109305..1109538 + 231 16764379 - STM1019 - - - H 1 2 Gifsy-2 prophage
1111509..1112306 + 795 16764382 - STM1022 - - - H 1 1 Gifsy-2 prophage; putative molecular chaperone, DnaJ family
1112373..1112690 + 315 16764383 - STM1023 - - - H 1 2 Gifsy-2 prophage
1112864..1112989 + 123 16764384 - STM1024 - - - H 1 2 +HMS 5.9 5.9 6.2 Gifsy-2 prophage
1175548..1176228 - 678 16764445 pipA STM1087 - - - H 1 2 Pathogenicity island encoded protein: SPI3
1176450..1177325 - 873 16764446 pipB STM1088 S COG1357 - H 2 2 +N 3.5 Pathogenicity island encoded protein: SPI3
1177543..1177863 + 318 16764447 - STM1089 - - - H 2 2 +S 3.6 putative inner membrane protein
1177873..1178214 - 339 16764448 pipC STM1090 - - - H 1 2 Pathogenicity island encoded protein: homologous to ipgE of Shigella
1178231..1179916 - 1683 16764449 sopB STM1091 - - - H 0 0 Salmonella outer protein: homologous to ipgD of Shigella
1180248..1180418 + 168 16764450 orfX STM1092 - - - H 1 2 +K 4.6 putative cytoplasmic protein
1180419..1180529 - 108 16764451 - STM1093 - - - H 1 2 +GK -3.2 3.2 putative cytoplasmic protein
1180638..1182107 - 1467 16764452 pipD STM1094 - - - H 0 0 Pathogenicity island encoded protein: SPI3
1216441..1217937 - 1494 16764485 - STM1128 E COG0591 - H 1 0 putative sodium/glucose cotransporter
1219460..1220620 + 1158 16764487 - STM1130 S COG3055 - H 2 0 putative inner membrane protein
1220666..1221358 + 690 16764488 - STM1131 - - - H 2 0 +Y 4.7 putative outer membrane protein
1221641..1222921 + 1278 16764489 - STM1132 G COG0477 - H 1 0 +F 3.4 putative sugar transport protein
1222932..1224038 + 1104 16764490 - STM1133 R COG0673 - H 1 0 putative dehydrogenases and related proteins
1228025..1228858 - 831 16764495 csgG STM1139 M COG1462 - H 0 0 putative transcriptional regulator in curly assembly/transport, 2nd curli operon
1228885..1229301 - 414 16764496 csgF STM1140 - - - H 1 2 +N 4.4 curli production assembly/transport component, 2nd curli operon
1229328..1229723 - 393 16764497 csgE STM1141 - - - H 1 2 curli production assembly/transport component, 2nd curli operon
1229728..1230378 - 648 16764498 csgD STM1142 K COG2771 - H 2 0 +N 3.2 putative transcriptional regulator (LuxR/UhpA family)
1231133..1231588 + 453 16764499 csgB STM1143 - - - H 1 1 +N 3.9 minor curlin subunit precursor, nucleator for assembly of adhesive surface organelles
1231630..1232085 + 453 16764500 csgA STM1144 - - - H 0 2 +GN 3.3 4.7 curlin major subunit, coiled surface structures; cryptic
1232147..1232473 + 324 16764501 csgC STM1145 - - - H 1 2 +QS 5.0 3.5 putative curli production protein
1232604..1232924 + 318 16764502 ymdA STM1146 - - - H 0 2 putative periplasmic protein
1326083..1327207 + 1122 16764594 - STM1239 - - - H 2 0 putative cytoplasmic protein
1328189..1328977 - 786 16764595 envF STM1240 - - - H 2 0 +K 3.1 putative envelope lipoprotein
1329896..1330417 - 519 16764597 envE STM1242 - - - H 1 1 +C 3.6 putative envelope protein
1330832..1331044 - 210 16764598 - STM1243 K COG1278 - H 1 2 homology with cold shock proteins
1331176..1331439 - 261 16764599 pagD STM1244 - - - H 2 2 +S 4.4 PhoP regulated
1332251..1332808 + 555 16764600 pagC STM1246 - - - H 1 2 +S 3.4 PhoP regulated: reduced macrophage survival
1334045..1334389 - 342 16764601 - STM1249 - - - H 2 2 putative periplasmic protein
1335092..1335364 + 270 16764602 - STM1250 - - - H 1 2 +S -3.2 putative cytoplasmic protein
1335516..1335983 + 465 16764603 - STM1251 O COG0071 - H 0 1 putative molecular chaperone (small heat shock protein)
1336322..1337365 + 1041 16764604 - STM1252 - - - H 0 0 +W 3.6 putative cytoplasmic protein
1337448..1337978 - 528 16764605 - STM1253 C COG3038 - H 0 0 +H 3.1 putative inner membrane protein
1338127..1338441 - 312 16764606 - STM1254 - - - H 2 2 +T 4.7 putative outer membrane lipoprotein
1345840..1346487 + 645 16764614 - STM1263 R COG3443 - H 0 0 putative periplasmic protein
1347529..1348122 + 591 16764616 - STM1265 K COG2771 - H 2 1 putative response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
1348191..1349039 + 846 16764617 - STM1266 K COG0789 - H 1 0 putative transcriptional regulator
1349294..1349542 - 246 16764618 - STM1267 - - - H 2 2 putative cytoplasmic protein
1349621..1349770 - 147 16764619 - STM1268 - - - H 2 2 +GKSTY -3.2 3.7 3.6 -3.1 3.7 putative cytoplasmic protein
1349853..1350398 + 543 16764620 - STM1269 E COG1605 - H 0 0 putative chorismate mutase
1350595..1351233 + 636 16764621 yeaS STM1270 E COG1280 - H 0 2 +F 3.2 paral putative transport protein
1351771..1351953 + 180 16764623 yoaG STM1272 - - - H 0 2 +TV 4.6 5.5 putative cytoplasmic protein
1352183..1352824 + 639 16764624 - STM1273 - - - H 0 0 +W 3.3 putative nitric oxide reductase
1353139..1353387 + 246 16764625 yeaQ STM1274 S COG2261 - H 1 2 +FGI 4.2 5.5 5.2 putative inner membrane protein
1391807..1392127 + 318 16764663 celA STM1312 G COG1440 H 1 2 PTS family, sugar specific enzyme IIB for cellobiose, arbutin, and salicin
1476167..1476805 - 636 16764741 ssrB STM1391 T COG2197 - H 2 1 Secretion system regulator: transcriptonal activator, homologous with degU/uvrY/bvgA
1476836..1479598 - 2760 16764742 ssrA STM1392 T COG0784 - H 1 0 Secretion system regulator:Sensor component
1479999..1480400 + 399 16764743 ssaB STM1393 - - - H 2 1 Secretion system apparatus
1480402..1481895 + 1491 16764744 ssaC STM1394 N COG1450 - H 2 0 Secretion system apparatus
1481876..1483087 + 1209 16764745 ssaD STM1395 - - - H 1 0 Secretion system apparatus
1483095..1483337 + 240 16764746 ssaE STM1396 - - - H 2 2 +Q 3.6 Secretion system effector
1483601..1483927 + 324 16764747 sseA STM1397 - - - H 2 2 +K 4.0 Secretion system effector
1483934..1484524 + 588 16764748 sseB STM1398 - - - H 1 0 Secretion system effector
1484997..1486451 + 1452 16764750 sseC STM1400 - - - H 1 0 Secretion system effector
1486467..1487054 + 585 16764751 sseD STM1401 - - - H 0 1 Secretion system effector
1487057..1487473 + 414 16764752 sseE STM1402 - - - H 0 2 Secretion system effector
1487525..1487959 + 432 16764753 sscB STM1403 R COG0457 - H 0 2 +M 4.1 Secretion system chaparone
1488754..1489443 + 687 16764755 sseG STM1405 - - - H 1 2 Secretion system effector
1489537..1489752 + 213 16764756 ssaG STM1406 - - - H 2 2 +IM 3.2 6.0 Secretion system apparatus
1489793..1490020 + 225 16764757 ssaH STM1407 - - - H 1 2 +L 3.5 Secretion system apparatus
1490032..1490280 + 246 16764758 ssaI STM1408 - - - H 1 2 +S 4.2 Secretion system apparatus
1490277..1491026 + 747 16764759 ssaJ STM1409 N COG1766 - H 2 0 Secretion system apparatus: homology with the yscJ/mxiJ/prgK family of lipoproteins
1491044..1491592 + 546 16764760 - STM1410 - - - H 1 2 putative cytoplasmic protein
1491589..1492263 + 672 16764761 ssaK STM1411 - - - H 1 0 Secretion system apparatus
1492229..1493245 + 1014 16764762 ssaL STM1412 - - - H 0 0 Secretion system apparatus
1493303..1493671 + 366 16764763 ssaM STM1413 - - - H 2 2 +V -3.0 Secretion system apparatus
1493656..1495701 + 2043 16764764 ssaV STM1414 N COG1298 - H 0 0 Secretion system apparatus: homology with the LcrD family of proteins
1496995..1497372 + 375 16764766 ssaO STM1416 - - - H 1 2 +Q 6.5 Secretion system apparatus
1497353..1497727 + 372 16764767 ssaP STM1417 - - - H 1 1 Secretion system apparatus
1497708..1498676 + 966 16764768 ssaQ STM1418 N COG1886 - H 1 0 Secretion system apparatus
1498744..1499391 + 645 16764769 ssaR STM1419 N COG1338 - H 1 0 Secretion system apparatus: homology with YscR of the secretion system of Yersinia
1499388..1499654 + 264 16764770 ssaS STM1420 N COG1987 - H 2 2 Secretion system apparatus: homology with YscS of the secretion system of Yersinia
1499655..1500434 + 777 16764771 ssaT STM1421 N COG1684 - H 2 0 Secretion system apparatus: homology with YscT of the secretion system of Yersinia
1500431..1501489 + 1056 16764772 ssaU STM1422 N COG1377 - H 2 0 Secretion system apparatus: homology with YscU of the secretion system of Yersinia
1597094..1597528 - 432 16764864 marA STM1519 K COG2207 H 1 2 transcriptional activator of defense systems (AraC/XylS family), multiple antibiotic resistance protein
1618320..1619606 - 1284 16764888 - STM1543 G COG0477 - H 1 0 putative transport protein
1619783..1621339 - 1554 16764889 pqaA STM1544 - - - H 2 0 PhoPQ-regulated protein
1621409..1622650 - 1239 16764890 - STM1545 G COG0477 - H 0 0 +I 3.1 putative multidrug efflux protein
1624913..1625953 + 1038 16764893 - STM1548 J COG0809 - H 2 0 putative S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
1643558..1643887 - 327 16764906 - STM1562 - - H 1 2 putative periplasmic transport protein
1691246..1691644 - 396 16764945 ugtL STM1601 - - H 2 2 putative membrane protein: homology with chitinase from Schizosaccharomyces
1692181..1693131 + 948 16764946 sifB STM1602 - - H 2 1 Salmonella translocated effector: translocated by SPI-2
1719621..1720022 + 399 16764973 - STM1629 - - - H 2 2 +S 4.3 putative dipicolinate reductase
1720151..1720867 - 714 16764974 - STM1630 - - - H 2 0 +F 4.4 putative inner membrane protein
1721293..1722519 + 1224 16764975 sseJ STM1631 - - - H 2 0 Salmonella translocated effector: regulated by SPI-2
1722640..1722984 - 342 16764976 - STM1632 S COG3326 - H 1 2 putative inner membrane protein
1723891..1724652 + 759 16764977 - STM1633 E COG0834 - H 2 0 putative periplasmic binding protein
1724659..1725306 + 645 16764978 - STM1634 E COG0765 - H 2 1 putative amino acid ABC transporter permease component
1725331..1726062 + 729 16764979 - STM1635 E COG1126 - H 1 0 putative ABC-type polar amino acid transport system, ATPase component
1726059..1726739 + 678 16764980 - STM1636 E COG0765 - H 1 0 putative ABC-type transport system probable membrane spanning protein
1726876..1728426 + 1548 16764981 - STM1637 - - - H 1 0 putative inner membrane protein
1729115..1729552 + 435 16764982 - STM1638 Q COG0500 - H 0 2 putative SAM-dependent methyltransferases
1729823..1730353 - 528 16764983 cybB STM1639 C COG3038 - H 0 1 +M 4.4 cytochrome b(561)
1759693..1760250 - 555 16765010 - STM1667 O COG2077 - H 1 0 putative thiol peroxidase
1760349..1761179 - 828 16765011 - STM1668 - - - H 2 0 putative outer membrane or exported
1761200..1763182 - 1980 16765012 - STM1669 - - - H 0 0 homology to invasin C of Yersinia; intimin
1763257..1764102 - 843 16765013 - STM1670 - - - H 1 0 +T 3.7 putative serine/threonine protein kinase
1764396..1765253 + 855 16765014 - STM1671 K COG2207 - H 2 0 putative bacterial regulatory helix-turn-helix proteins, araC family
1765644..1766753 + 1107 16765015 - STM1672 - - - H 2 0 putative cytoplasmic protein
1766967..1767221 - 252 16765016 - STM1673 - - - H 1 2 +T 7.2 putative outer membrane lipoprotein
1911668..1912000 - 330 16765154 ycgL STM1813 S COG3100 H 1 2 putative cytoplasmic protein
1931276..1931746 + 468 16765174 - STM1833 - - H 1 1 putative inner membrane protein
1952012..1952734 - 720 16765196 sopE2 STM1855 - - H 2 1 TypeIII-secreted protein effector: invasion-associated protein
1955007..1955426 - 417 16765198 - STM1857 K COG0454 H 1 2 putative acetyltransferase
1955796..1956065 + 267 16765199 - STM1858 - - - H 1 2 putative cytoplasmic protein
1957835..1958203 + 366 16765202 - STM1861 L COG0582 - H 0 2 putative cytoplasmic protein
1959507..1960421 + 912 16765203 pagO STM1862 G COG0697 - H 2 0 PhoPQ-activated gene; predicted integral membrane protein
1960554..1960712 + 156 16765204 - STM1863 - - - H 2 2 +FM 3.4 4.1 putative inner membrane protein
1960722..1961336 + 612 16765205 - STM1864 - - - H 1 1 putative inner membrane protein
1963179..1963379 + 198 16765207 pagK STM1867 - - - H 2 2 +P 3.9 PhoPQ-activated gene
1965083..1965250 + 165 16765209 - STM1868A - - - H 2 2 +I 4.9 lytic enzyme
2032589..2032915 - 324 16765280 - STM1939 - - H 2 2 putative glucose-6-phosphate dehydrogenase
2045735..2046193 - 456 16765295 tnpA_2 STM1957 L COG1943 H 1 2 transposase for IS200
2064949..2065326 + 375 16765316 fliO STM1978 N COG3190 H 1 2 flagellar biosynthesis
2092957..2093283 - 324 16765343 - STM2011 - - H 2 2 putative cytoplasmic protein
2122675..2123025 + 348 16765374 pduH STM2044 - - + H 0 1 +H 4.3 Propanediol utilization: diol dehydratase reactivation
2123805..2124437 + 630 16765377 pduL STM2047 - - + H 1 0 Propanediol utilization
2124434..2124925 + 489 16765378 pduM STM2048 - - + H 1 0 Propanediol utilization
2124929..2125204 + 273 16765379 pduN STM2049 - - + H 1 2 +SV 4.1 4.0 Propanediol utilization: polyhedral bodies
2125214..2126224 + 1008 16765380 pduO STM2050 S COG3193 + H 1 0 Propanediol utilization: B12 related
2127627..2128739 + 1110 16765382 pduQ STM2052 C COG1454 + H 1 0 Propanediol utilization: propanol dehydrogenase
2128736..2130091 + 1353 16765383 pduS STM2053 C COG1726 + H 1 0 Propanediol utilization: polyhedral bodies
2130094..2130648 + 552 16765384 pduT STM2054 - - + H 1 0 Propanediol utilization: polyhedral bodies
2157958..2159124 - 1164 16765410 udg STM2080 M COG1004 - H 1 0 UDP-glucose/GDP-mannose dehydrogenase
2160931..2162361 - 1428 16765412 rfbP STM2082 M COG2148 - H 2 0 LPS side chain defect: bifunctional enzyme: undecaprenol-phosphate galactosephosphotransferase, and O-antigen transfer
2162433..2163866 - 1431 16765413 rfbK STM2083 G COG1109 - H 2 0 LPS side chain defect: phosphomannomutase
2163853..2165292 - 1437 16765414 rfbM STM2084 M COG0836 - H 2 0 LPS side chain defect: mannose-1-phosphate guanylyltransferase
2165293..2166237 - 942 16765415 rfbN STM2085 M COG0463 - H 2 0 LPS side chain defect: rhamnosyl transferase
2166238..2167299 - 1059 16765416 rfbU STM2086 M COG0438 - H 2 0 LPS side chain defect: mannosyl transferase
2167619..2168620 - 999 16765417 rfbV STM2087 M COG0463 - H 2 0 LPS side chain defect: abequosyltransferase
2168625..2169917 - 1290 16765418 rfbX STM2088 - - - H 2 2 +I 3.5 LPS side chain defect: putative O-antigen transferase
2169999..2170898 - 897 16765419 rfbJ STM2089 M COG0451 - H 2 0 LPS side chain defect: CDP-abequose synthase
2170926..2172239 - 1311 16765420 rfbH STM2090 M COG0399 - H 1 0 LPS side chain defect: CDP-6deoxy-D-xylo-4-hexulose-3-dehydrase
2172266..2173345 - 1077 16765421 rfbG STM2091 M COG0451 - H 1 0 LPS side chain defect: CDP glucose 4,6-dehydratase
2173350..2174123 - 771 16765422 rfbF STM2092 M COG1208 - H 1 0 LPS side chain defect: glucose-1-phosphate cytidylyltransferase
2174120..2175112 - 990 16765423 rfbI STM2093 H COG0543 - H 2 0 LPS side chain defect: CDP-6-deoxy-delta3,4-glucoseen reductase
2175118..2175669 - 549 16765424 rfbC STM2094 M COG1898 - H 2 1 dTDP-4,deoxyrhamnose 3,5 epimerase
2175670..2176548 - 876 16765425 rfbA STM2095 M COG1209 - H 0 0 dTDP-glucose pyrophosphorylase
2177495..2178580 - 1083 16765427 rfbB STM2097 M COG1088 - H 1 0 dTDP-glucose 4,6 dehydratase
2233116..2233451 - 333 16765468 - STM2139 - - H 1 2 putative inner membrane protein
2242255..2242569 + 312 16765477 - STM2148 - - - H 1 2 putative periplasmic protein
2242832..2243839 - 1005 16765478 stcD STM2149 - - - H 2 0 putative outer membrane lipoprotein
2243855..2246344 - 2487 16765479 stcC STM2150 N COG3188 - H 1 0 paral putative outer membrane protein
2246358..2247041 - 681 16765480 stcB STM2151 N COG3121 - H 2 0 putative periplasmic chaperone protein
2247097..2247627 - 528 16765481 stcA STM2152 - - - H 1 1 paral putative fimbrial-like protein
2247906..2248187 - 279 16765482 yehE STM2153 - - - H 1 2 +T 5.6 putative outer membrane protein
2252013..2252471 + 456 16765485 yehR STM2156 - - - H 1 1 +K 4.1 putative lipoprotein
2252643..2253173 + 528 16765486 - STM2156A - - - H 2 0 +Y 3.2 hypothetical 16.9 kd lipoprotein precursor
2334013..2334456 - 441 16765561 - STM2233 - - H 1 2 putative cytoplasmic protein
2334834..2335361 - 525 16765562 - STM2234 - - H 1 1 putative tail fiber assembly protein
2339184..2339552 - 366 16765567 - STM2239 - - H 1 2 putative phage protein; homology to antiterminator protein Q of phage P5
2347393..2348436 - 1041 16765575 ccmH STM2247 R COG0457 + H 2 0 putative heme lyase subunit, cytochrome c-type biogenesis
2348433..2348990 - 555 16765576 ccmG STM2248 O COG0526 + H 1 0 heme lyase/disulfide oxidoreductase, cytochrome c-type biogenesis
2348987..2350918 - 1929 16765577 ccmF STM2249 O COG1138 + H 2 0 cytochrome c-type biogenesis protein
2350915..2351394 - 477 16765578 ccmE STM2250 O COG2332 + H 2 1 periplasmic heme-dependent peroxidase, cytochrome c-type biogenesis protein
2351391..2351603 - 210 16765579 ccmD STM2251 N COG3114 + H 2 2 +A 5.3 heme exporter protein C, cytochrome c-type biogenesis protein
2351600..2352337 - 735 16765580 ccmC STM2252 O COG0755 + H 2 0 +W 4.2 ABC superfamily (membrane) heme exporter protein, cytochrome c-type biogenesis protein
2352389..2353048 - 657 16765581 ccmB STM2253 O COG2386 + H 2 1 +L 4.2 ABC superfamily (membrane) heme exporter protein, cytochrome c-type biogenesis protein
2353045..2353662 - 615 16765582 ccmA STM2254 Q COG1131 + H 2 2 ABC superfamily (membrane) heme exporter protein, cytochrome c-type biogenesis protein
2411673..2413040 - 1365 16765632 menE STM2305 I COG0318 + H 0 0 o-succinylbenzoate-CoA ligase
2413037..2413999 - 960 16765633 menC STM2306 H COG1441 + H 0 0 o-succinylbenzoyl-CoA synthase
2413999..2414856 - 855 16765634 menB STM2307 H COG0447 + H 0 0 dihydroxynaphtoic acid synthetase
2414871..2415629 - 756 16765635 yfbB STM2308 R COG0596 + H 0 0 putative enzyme
2415626..2417296 - 1668 16765636 menD STM2309 H COG1165 + H 0 0 bifunctional: 2-oxoglutarate decarboxylase; SHCHC synthase
2417382..2418677 - 1293 16765637 menF STM2310 H COG1169 + H 0 0 isochorismate synthase (isochorismate hydroxymutase 2), menaquinone biosynthesis
2565160..2565654 - 492 16765775 eutK STM2455 - - H 1 1 putative carboxysome structural protein, ethanolamine utilization
2568624..2570027 - 1401 16765779 eutA STM2459 - - + H 1 0 CPPZ-55 prophage; chaperonin in ethanolamine utilization
2571370..2572557 - 1185 16765781 eutG STM2461 C COG1454 + H 1 0 paral putative transport protein in ethanolamine utilization
2572547..2573386 - 837 16765782 eutJ STM2462 - - + H 1 0 paral putative heatshock protein (Hsp70)
2573397..2574800 - 1401 16765783 eutE STM2463 C COG1012 + H 0 0 putative aldehyde oxidoreductase in ethanolamine utilization
2574812..2575111 - 297 16765784 eutN STM2464 - - + H 0 2 +V 3.9 putative detox protein in ethanolamine utilization
2575212..2575502 - 288 16765785 eutM STM2465 - - + H 0 1 putative detox protein in ethanolamine utilization
2575543..2576559 - 1014 16765786 eutD STM2466 C COG0280 + H 1 0 putative phosphotransacetylase in ethanolamine utilization
2576556..2577359 - 801 16765787 eutT STM2467 - - + H 0 0 putative cobalamin adenosyltransferase, ethanolamine utilization
2577356..2578045 - 687 16765788 eutQ STM2468 - - + H 0 0 putative ethanolamine utilization protein
2579331..2579789 - 456 16765791 tnpA_3 STM2471 L COG1943 H 1 2 transposase for IS200
2621943..2622272 + 327 16765828 - STM2508 - - H 2 2 putative cytoplasmic protein
2661485..2662294 - 807 16765848 - STM2528 R COG3302 + H 0 0 putative dimethylsulfoxide reductase
2665447..2667762 - 2313 16765851 pbpC STM2531 M COG0744 + H 1 0 transglycosylase of penicillin-binding protein 1c
2667763..2672697 - 4932 16765852 - STM2532 R COG2373 + H 0 0 putative inner membrane lipoprotein
2672906..2673748 + 840 16765853 sseA STM2533 P COG2897 + H 1 0 putative sulfurtransferase
2767860..2768843 - 981 16765946 - STM2626 - - - H 1 0 Gifsy-1 prophage: similar to replication protein 15
2769627..2770037 + 408 16765948 - STM2628 - - - H 0 2 Gifsy-1 prophage
2770087..2770347 + 258 16765949 - STM2629 - - - H 1 2 +CFR 3.1 3.2 4.4 Gifsy-1 prophage
2770340..2770498 + 156 16765950 - STM2630 - - - H 0 2 +CKY 5.8 3.4 3.4 Gifsy-1 prophage
2770520..2770870 + 348 16765951 - STM2631 - - - H 2 2 Gifsy-1 prophage
2812985..2813503 + 516 16765986 yfiR STM2671 - - H 1 2 putative periplasmic protein
2858062..2858508 - 444 16766024 - STM2711 - - + H 2 2 +R 4.6 Fels-2 prophage: similar to gpS for completion of tail, in phage P2
2858501..2858932 - 429 16766025 - STM2712 - - + H 0 0 Fels-2 prophage: similar to gpR for completion of tail, in phage P2
2858895..2859179 - 282 16766026 - STM2713 - - + H 1 2 +C 5.6 Fels-2 prophage: similar to protein from phage CTX
2859028..2859456 - 426 16766027 - STM2714 - - + H 1 2 Fels-2 prophage: similar to lysis protein (lysB) in phage P2
2859833..2860342 - 507 16766028 - STM2715 - - + H 1 1 Fels-2 prophage: probable prophage lysozyme
2860542..2860745 - 201 16766030 - STM2717 - - + H 1 2 Fels-2 prophage: similar to gpX in phage P2
2860745..2861209 - 462 16766031 - STM2718 - - + H 0 0 Fels-2 prophage: similar to gpQ in phage 186
2861303..2861956 - 651 16766032 - STM2719 - - + H 1 0 Fels-2 prophage: similar to gpR in phage 186
2861960..2863042 - 1080 16766033 - STM2720 - - + H 0 0 Fels-2 prophage: similar to gpN, major capsid, in phage P2
2863059..2863892 - 831 16766034 - STM2721 - - + H 0 0 Fels-2 prophage: similar to gpO, capsid scaffold, in phage P2
2864035..2865801 + 1764 16766035 - STM2722 - - + H 0 0 Fels-2 prophage: similar to gpP, ATP charging, in phage P2
2866927..2868678 - 1749 16766037 - STM2724 - - - H 2 0 Fels-2 prophage: hypothetical protein
2868892..2869623 - 729 16766038 - STM2726 - - - H 2 2 Fels-2 prophage: hypothetical protein
2869683..2869988 - 303 16766039 - STM2727 - - - H 1 2 Fels-2 prophage: similar to protein in phage 186, and to retron in E coli
2869927..2870115 - 186 16766040 - STM2728 - - - H 1 2 Fels-2 prophage: hypothetical protein
2872688..2873545 - 855 16766042 - STM2730 L COG0338 - H 1 0 Fels-2 prophage: similar to retron in E coli
2874070..2874411 - 339 16766045 - STM2733 - - - H 1 2 Fels-2 prophage: similar to E. coli retron Ec67
2874631..2875089 + 456 16766046 - STM2734 - - - H 1 2 Fels-2 prophage: hypothetical protein
2875037..2875270 - 231 16766047 - STM2735 - - - H 1 2 Fels-2 prophage: hypothetical protein
2875823..2876062 - 237 16766049 - STM2737 - - - H 0 2 Fels-2 prophage: similar to protein in phage
2876179..2876811 + 630 16766050 - STM2738 K COG2932 - H 1 1 Fels-2 prophage: similar to E. coli retron
2876815..2877840 + 1023 16766051 - STM2739 L COG0582 - H 0 0 Fels-2 prophage: similar to int protein in phage 186
2880444..2881637 + 1191 16766054 - STM2742 - - - H 2 0 +S 3.6 putative cytoplasmic protein
2881972..2882799 - 825 16766055 - STM2743 - - - H 2 0 putative cytoplasmic protein
2886073..2887356 + 1281 16766058 - STM2746 - - - H 2 2 +IN 3.0 3.8 putative Excinuclease ATPase subunit
2887401..2888219 + 816 16766059 - STM2747 - - - H 2 1 putative cytoplasmic protein
2888373..2888729 - 354 16766060 - STM2748 K COG1396 - H 1 2 putative transcriptional regulator
2889221..2889742 + 519 16766062 - STM2750 G COG3730 H 1 2 putative PTS system, glucitol/sorbitol-specific enzyme II
2889739..2890113 + 372 16766063 - STM2751 G COG3731 H 1 2 putative PTS enzyme III glucitol
2901480..2903354 + 1872 16766073 - STM2761 - - - H 2 0 putative inner membrane protein
2903614..2904897 - 1281 16766074 - STM2762 - - - H 2 0 putative inner membrane protein
2905475..2906071 + 594 16766075 - STM2763 L COG0582 - H 1 2 putative integrase
2907066..2907332 - 264 16766077 - STM2765 L COG2801 - H 0 2 +K 3.8 putative transposase
2907785..2908423 - 636 16766078 - STM2766 - - - H 2 1 +FN 3.2 3.3 putative cytoplasmic protein
2908420..2910402 - 1980 16766079 - STM2767 L COG0210 - H 2 0 putative Superfamily I DNA and RNA helicase
2912623..2913162 - 537 16766082 fljA STM2770 - - - H 2 2 Flagellar synthesis: repressor of fliC
2913230..2914750 - 1518 16766083 fljB STM2771 N COG1344 - H 0 0 +NT 3.1 3.1 Flagellar synthesis: phase 2 flagellin (filament structural protein)
2914842..2915414 + 570 16766084 hin STM2772 L COG1961 - H 1 2 H inversion: regulation of flagellar gene expression by site-specific inversion of DNA
2926802..2927854 - 1050 16766091 - STM2780 S COG1357 H 1 2 Homolog of pipB, putative pentapeptide repeats (8 copies)
3009898..3010806 - 906 16766171 avrA STM2865 - - - H 2 0 putative inner membrane protein
3010967..3011722 - 753 16766172 sprB STM2866 K COG2771 - H 0 0 transcriptional regulator
3012107..3012994 - 885 16766173 hilC STM2867 K COG2207 - H 2 0 bacterial regulatory helix-turn-helix proteins, araC family
3013339..3013791 - 450 16766174 - STM2868 - - - H 1 1 putative cytoplasmic protein
3013788..3014468 - 678 16766175 orgA STM2869 - - - H 0 0 putative flagellar biosynthesis/type III secretory pathway protein
3014425..3015024 - 597 16766176 - STM2870 - - - H 0 1 putative inner membrane protein
3014996..3015754 - 756 16766177 prgK STM2871 N COG1766 - H 1 0 cell invasion protein; lipoprotein, may link inner and outer membranes
3015751..3016056 - 303 16766178 prgJ STM2872 - - - H 0 2 cell invasion protein; cytoplasmic
3016075..3016317 - 240 16766179 prgI STM2873 - - - H 0 2 cell invasion protein; cytoplasmic
3016342..3017520 - 1176 16766180 prgH STM2874 - - - H 0 0 cell invasion protein
3017836..3018765 + 927 16766181 hilD STM2875 K COG2207 - H 2 0 regulatory helix-turn-helix proteins, araC family
3019856..3021517 + 1659 16766182 hilA STM2876 T COG0745 - H 1 0 invasion genes transcription activator
3021535..3022017 + 480 16766183 iagB STM2877 M COG0741 - H 2 2 cell invasion protein
3022071..3023702 - 1629 16766184 sptP STM2878 - - - H 1 0 protein tyrosine phosphate
3023689..3024081 - 390 16766185 sicP STM2879 - - - H 2 2 +I 3.4 chaparone, related to virulence
3024108..3024368 - 258 16766186 - STM2880 - - - H 2 2 putative cytoplasmic protein
3024412..3024660 - 246 16766187 iacP STM2881 I COG0236 - H 2 2 +D 4.3 putative acyl carrier protein
3024679..3026736 - 2055 16766188 sipA STM2882 - - - H 0 0 cell invasion protein
3026755..3027786 - 1029 16766189 sipD STM2883 - - - H 1 0 +S 3.9 cell invasion protein
3027857..3029086 - 1227 16766190 sipC STM2884 - - - H 1 0 +S 4.4 cell invasion protein
3030898..3031395 - 495 16766192 sicA STM2886 R COG0457 - H 1 0 surface presentation of antigens; secretory proteins
3031533..3032603 - 1068 16766193 spaS STM2887 N COG1377 - H 1 0 surface presentation of antigens; secretory proteins
3032590..3033381 - 789 16766194 spaR STM2888 N COG1684 - H 0 0 surface presentation of antigens; secretory proteins
3033385..3033645 - 258 16766195 spaQ STM2889 N COG1987 - H 0 2 +L 4.1 surface presentation of antigens; secretory proteins
3033671..3034345 - 672 16766196 spaP STM2890 N COG1338 - H 2 0 surface presentation of antigens; secretory proteins
3036256..3036699 - 441 16766199 invI STM2893 - - - H 1 2 +EQR 4.0 3.8 3.1 surface presentation of antigens; secretory proteins
3037969..3038376 - 405 16766201 invB STM2895 - - - H 1 1 surface presentation of antigens; secretory proteins
3038400..3040457 - 2055 16766202 invA STM2896 N COG1298 - H 0 0 invasion protein
3040482..3041600 - 1116 16766203 invE STM2897 - - - H 0 0 invasion protein
3041597..3043285 - 1686 16766204 invG STM2898 N COG1450 - H 0 0 invasion protein; outer membrane
3043282..3043932 - 648 16766205 invF STM2899 K COG2207 - H 0 0 invasion protein
3044389..3044832 + 441 16766206 invH STM2900 - - - H 2 2 +S 3.6 invasion protein
3045263..3045712 + 447 16766207 - STM2901 - - - H 1 2 putative cytoplasmic protein
3045697..3046044 + 345 16766208 - STM2902 - - - H 2 2 putative cytoplasmic protein
3046317..3046643 - 324 16766209 - STM2903 - - - H 2 2 +ENY 3.1 3.4 5.2 putative cytoplasmic protein
3047332..3047622 + 288 16766210 - STM2904 - - - H 0 2 +G -3.2 putative ABC-type transport system
3047619..3048146 + 525 16766211 - STM2905 K COG0454 - H 1 0 putative acetyltransferase
3048771..3049427 + 654 16766213 pphB STM2907 T COG0639 - H 2 0 serine/threonine specific protein phosphatase 2
3049599..3050120 - 519 16766214 - STM2908 - - - H 1 2 putative cytoplasmic protein
3191120..3191830 - 708 16766331 stdA STM3029 N COG3539 - H 0 0 +T 3.3 putative fimbrial-like protein
3192423..3193055 - 630 16766332 - STM3030 - - - H 1 0 putative periplasmic protein
3193102..3193638 - 534 16766333 - STM3031 - - - H 1 2 +S 4.3 ail and ompX Homolog
3194318..3194776 - 456 16766334 tnpA_4 STM3032 L COG1943 - H 1 2 transposase for IS200
3195156..3195554 - 396 16766335 - STM3033 R COG1487 - H 0 2 putative nucleic acid-binding protein, contains PIN domain
3195554..3195781 - 225 16766336 - STM3034 - - - H 1 2 putative cytoplasmic protein
3195958..3196209 + 249 16766337 - STM3035 - - - H 0 2 putative periplasmic protein
3241814..3242287 - 471 16766381 - STM3080 S COG2731 H 2 2 putative mannitol dehydrogenase
3439035..3439538 - 501 16766570 yhbS STM3272 R COG3153 H 1 1 putative ABC superfamily (membrane) transport protein
3444196..3444726 + 528 16766576 - STM3278 - - H 2 1 putative cytoplasmic protein
3597374..3597850 - 474 16766732 bfr STM3443 P COG2193 H 2 2 bacterioferrin, an iron storage homoprotein
3635160..3635618 - 456 16766767 tnpA_5 STM3479 L COG1943 H 1 2 transposase for IS200
3838674..3839141 - 465 16766939 - STM3653 K COG0454 H 2 2 putative acetyltransferase
3908290..3909504 + 1212 16766998 rfaL STM3713 - - - H 2 0 O-antigen ligase
3909561..3910706 - 1143 16766999 rfaK STM3714 M COG0438 - H 2 0 putative hexose transferase, lipopolysaccharide core biosynthesis
3910807..3911616 - 807 16767000 rfaZ STM3715 - - - H 2 0 lipopolysaccharide core biosynthesis
3911766..3912464 - 696 16767001 rfaY STM3716 - - - H 2 2 +K 4.2 lipopolysaccharide core biosynthesis; modification of heptose region of the core
3912487..3913497 - 1008 16767002 rfaJ STM3717 M COG1442 - H 2 0 UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase
3913515..3914528 - 1011 16767003 rfaI STM3718 M COG1442 - H 2 0 UDP-D-galactose:(glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase
3914534..3915613 - 1077 16767004 rfaB STM3719 M COG0438 - H 2 0 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase
3915683..3915916 - 231 16767005 yibR STM3720 - - - H 2 2 +I 4.5 putative inner membrane protein
3915948..3916745 - 795 16767006 rfaP STM3721 - - - H 0 0 lipopolysaccharide core biosynthesis; phosphorylation of core heptose
3917859..3918893 - 1032 16767008 rfaQ STM3723 M COG0859 - H 0 0 lipopolysaccharide core biosynthesis; modification of heptose region of core
3954069..3954686 + 615 16767040 rmbA STM3756 - - H 2 1 putative cytoplasmic protein
3957723..3958187 - 462 16767042 fidL STM3758 - - H 1 1 putative inner membrane protein
3979137..3979460 + 321 16767062 - STM3778 K COG2944 - H 0 2 +S 4.0 putative helix-turn-helix protein
3979551..3979820 - 267 16767063 - STM3779 G COG1925 - H 2 2 +M 3.3 putative phosphotransferase system, HPr-related protein
3979830..3980690 - 858 16767064 - STM3780 G COG0191 - H 1 0 putative fructose-bisphosphate aldolase class-II
3980753..3982237 - 1482 16767065 - STM3781 G COG1070 - H 0 0 putative sugar (pentulose and hexulose) kinase
3982230..3983588 - 1356 16767066 - STM3782 G COG3775 - H 0 0 putative PTS system galactitol-specific enzyme IIC component
3983664..3983951 - 285 16767067 - STM3783 - - - H 2 2 +V 3.7 putative periplasmic protein
3983948..3984421 - 471 16767068 - STM3784 G COG1762 H 1 1 putative phosphotransferase system mannitol/fructose-specific IIA domain
4010973..4012199 - 1224 16767096 yidR STM3811 - - + H 0 0 putative cytoplasmic protein
4012321..4013364 - 1041 16767097 ccmH STM3812 R COG0457 + H 2 0 putative heme lyase subunit, cytochrome c-type biogenesis
4013361..4013918 - 555 16767098 ccmG STM3813 O COG0526 + H 1 0 heme lyase disulfide oxidoreductase, cytocyhrome c-type biogenesis
4013915..4015846 - 1929 16767099 ccmF STM3814 O COG1138 + H 2 0 cytochrome c-type biogenesis protein
4015843..4016322 - 477 16767100 ccmE STM3815 O COG2332 + H 2 1 periplasmic heme-dependent peroxidase, cytochrome c-type biogenesis protein
4016319..4016531 - 210 16767101 ccmD STM3816 N COG3114 + H 2 2 +A 5.3 heme exporter protein C, cytochrome c-type biogenesis protein
4016528..4017265 - 735 16767102 ccmC STM3817 O COG0755 + H 2 0 +W 4.2 ABC superfamily (membrane) heme exporter protein, cytochrome c-type biogenesis protein
4017317..4017976 - 657 16767103 ccmB STM3818 O COG2386 + H 2 1 +L 4.2 ABC superfamily (membrane) heme exporter protein, cytochrome c-type biogenesis protein
4017973..4018590 - 615 16767104 ccmA STM3819 Q COG1131 + H 2 2 ABC superfamily (atp_bind), heme exporter protein, cytochrome c-type biogenesis protein
4051378..4052340 + 960 16767129 - STM3845 - - H 2 1 putative inner membrane protein
4115668..4115985 + 315 16767182 - STM3906 - - H 1 2 putative cytoplasmic protein
4115982..4116323 + 339 16767183 - STM3907 - - H 1 1 putative cytoplasmic protein
4149560..4150102 + 540 16767212 - STM3941 - - H 2 1 putative inner membrane protein
4240092..4240403 - 309 16767296 - STM4031 - - H 2 2 putative cytoplasmic protein
4289070..4289399 + 327 16767345 yneC STM4079 S COG1359 H 2 2 putative inner membrane protein
4417918..4418646 - 726 16767446 - STM4196 - - H 2 2 putative cytoplasmic protein
4476003..4476119 + 114 16767505 - STM4255 - - - H 1 2 +P 3.8 putative cytoplasmic protein
4477857..4478489 + 630 16767507 - STM4257 - - - H 2 2 putative inner membrane or exported
4478486..4479874 + 1386 16767508 - STM4258 - - - H 2 0 +S 3.2 putative methyl-accepting chemotaxis protein
4479864..4481183 + 1317 16767509 - STM4259 M COG1538 - H 2 0 putative ABC exporter outer membrane component homolog
4481180..4482457 + 1275 16767510 - STM4260 Q COG0845 - H 2 0 membrane permease, predicted cation efflux pump
4482474..4499153 + 16677 16767511 - STM4261 - - - H 0 0 +T 4.0 putative inner membrane protein
4499193..4501259 + 2064 16767512 - STM4262 Q COG2274 - H 2 0 putative ABC-type bacteriocin/lantibiotic exporter, contain an N-terminal double-glycine peptidase domain
4558172..4559077 + 903 16767560 - STM4310 S COG3204 - H 0 0 putative inner membrane protein
4559416..4559874 + 456 16767561 tnpA_6 STM4311 L COG1943 - H 1 2 transposase for IS200
4560083..4560352 - 267 16767562 - STM4312 - - - H 0 2 +ST 4.3 5.3 putative phage protein
4560360..4560575 - 213 16767563 - STM4313 - - - H 1 2 +NS 4.7 4.6 putative cytoplasmic protein
4560598..4560885 - 285 16767564 - STM4314 K COG2771 - H 2 2 +K 3.9 putative bacterial regulatory proteins, luxR family
4560882..4561757 - 873 16767565 - STM4315 K COG2207 - H 2 0 +S 3.3 putative AraC-type DNA-binding domain-containing protein
4562022..4562243 - 219 16767566 - STM4316 - - - H 2 2 +GP -3.2 4.1 putative cytoplasmic protein
4614456..4614860 + 402 16767616 yjfI STM4370 - - H 2 2 putative cytoplasmic protein
4683942..4684280 + 336 16767686 - STM4440 - - H 1 2 putative cytoplasmic protein
4702512..4702958 - 444 16767702 - STM4457 L COG2801 H 1 2 putative transposase
4729211..4729741 + 528 16767730 idnK STM4485 P COG3265 H 1 1 D-gluconate kinase, thermosensitive
4752665..4753390 - 723 16767743 yeeN STM4499 S COG0217 H 2 2 putative cytoplasmic protein
4756323..4756931 + 606 16767746 - STM4502 - - H 1 2 putative cytoplasmic protein
4794934..4795356 + 420 16767779 - STM4535 G COG2893 H 1 1 putative PTS permease
4812269..4812706 + 435 16767798 holD STM4557 - - H 1 2 DNA polymerase III, psi subunit
4847811..4848896 - 1083 16767832 sthE STM4591 N COG3539 - H 1 0 +T 3.6 putative major fimbrial subunit
4848937..4849494 - 555 16767833 sthD STM4592 N COG3539 - H 1 1 +NT 3.4 3.8 putative fimbrial subunit
4849512..4852049 - 2535 16767834 sthB STM4593 N COG3188 - H 0 0 putative fimbrial usher protein
4852095..4852778 - 681 16767835 sthA STM4594 N COG3121 - H 1 0 +S 3.6 putative fimbrial chaparone protein
4852849..4853394 - 543 16767836 - STM4595 N COG3539 - H 0 1 +T 5.2 putative fimbrial chaparone protein
4853733..4854404 - 669 16767837 - STM4596 - - - H 1 0 putative inner membrane protein
4854789..4855103 - 312 16767838 - STM4597 - - - H 0 2 +C 3.2 putative periplasmic protein

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