| Coordinates | Strand | Length | PID | Gene name | Synonym | FunctionCode | COG | GCRegion | HGT | SimGC | SimMah | Dev.AA | Function |
| 36667..37320 | - | 651 | 15897012 | - | SSO0042 | - | - | H | 2 | 1 | Second ORF in transposon ISC1234 | ||
| 61275..61688 | + | 411 | 15897043 | - | SSO0077 | - | - | H | 2 | 1 | Hypothetical protein | ||
| 96568..97032 | - | 462 | 15897078 | - | SSO0118 | - | COG3430 | - | H | 0 | 2 | +Q 4.8 | Hypothetical protein |
| 97075..98595 | - | 1518 | 15897079 | - | SSO0119 | S | COG2064 | - | H | 1 | 0 | Conserved hypothetical protein | |
| 98567..100018 | - | 1449 | 15897080 | gspE-1 | SSO0120 | N | COG0630 | - | H | 0 | 0 | Type II secretion system protein, virB homolog (gspE-1) | |
| 100015..102102 | - | 2085 | 15897081 | - | SSO0121 | - | - | - | H | 0 | 0 | Hypothetical protein | |
| 102132..103238 | - | 1104 | 15897082 | sun-2 | SSO0122 | J | COG0144 | - | H | 0 | 0 | Sun (fmu) protein (sun-2) | |
| 103509..104171 | - | 660 | 15897083 | - | SSO0123 | - | - | - | H | 0 | 0 | Hypothetical protein | |
| 104246..105148 | + | 900 | 15897084 | - | SSO0124 | R | COG0446 | - | H | 0 | 0 | Conserved hypothetical protein | |
| 112358..112801 | + | 441 | 15897092 | - | SSO0134 | - | - | H | 1 | 1 | Second ORF in transposon ISC1212 | ||
| 114650..115024 | - | 372 | 15897094 | - | SSO0138 | - | - | H | 1 | 2 | Hypothetical protein | ||
| 129588..130016 | - | 426 | 15897105 | - | SSO0154 | - | - | H | 1 | 1 | Hypothetical protein | ||
| 136780..137088 | + | 306 | 15897115 | - | SSO0165 | N | COG1400 | H | 1 | 2 | Hypothetical protein | ||
| 167915..169744 | + | 1827 | 15897146 | - | SSO0195 | K | COG1293 | - | H | 0 | 0 | Membrane conserved hypothetical protein | |
| 169763..170626 | + | 861 | 15897147 | - | SSO0197 | T | COG0478 | - | H | 0 | 0 | Conserved hypothetical protein | |
| 170623..172464 | + | 1839 | 15897148 | - | SSO0198 | S | COG2433 | - | H | 0 | 0 | Conserved hypothetical protein | |
| 174056..174355 | + | 297 | 15897151 | - | SSO0200 | K | COG0640 | - | H | 0 | 2 | Hypothetical protein | |
| 236056..236454 | + | 396 | 15897220 | rpoG | SSO0277 | - | - | - | H | 1 | 0 | +S 3.3 | DNA-directed RNA polymerase, subunit G (rpoG) |
| 238363..238896 | - | 531 | 15897223 | - | SSO0281 | J | COG1676 | - | H | 0 | 0 | Hypothetical protein | |
| 238786..239298 | + | 510 | 15897224 | - | SSO0280 | K | COG1405 | - | H | 1 | 0 | Hypothetical protein | |
| 241015..242643 | - | 1626 | 15897226 | - | SSO0283 | R | COG0433 | - | H | 1 | 0 | Conserved hypothetical protein | |
| 242664..243029 | - | 363 | 15897227 | - | SSO0284 | - | - | - | H | 0 | 2 | Hypothetical protein | |
| 243065..243316 | - | 249 | 15897228 | - | SSO5559 | - | - | - | H | 0 | 2 | +N 3.1 | Hypothetical protein |
| 246892..247233 | - | 339 | 15897232 | - | SSO0288 | - | - | H | 1 | 2 | Integrase, probable (fragment) | ||
| 351214..351678 | - | 462 | 15897334 | ribH | SSO0400 | H | COG0054 | H | 1 | 2 | Riboflavin synthase beta chain (6,7 dimethyl 8-ribityllumazine synthase) (DMRKL synthase) (ribH) | ||
| 440776..441159 | + | 381 | 15897432 | - | SSO0507 | - | - | H | 1 | 2 | Hypothetical protein | ||
| 443033..443440 | + | 405 | 15897434 | - | SSO0509 | - | - | + | H | 2 | 2 | +P 3.9 | First ORF in transposon ISC1173 |
| 443316..443687 | - | 369 | 15897435 | - | SSO0510 | - | - | + | H | 2 | 2 | Second ORF in transposon ISC1217 | |
| 443596..444333 | - | 735 | 15897436 | - | SSO0512 | - | - | + | H | 2 | 0 | First ORF in transposon ISC1217 | |
| 444326..445135 | + | 807 | 15897437 | - | SSO0511 | L | COG1662 | H | 2 | 2 | Second ORF in transposon ISC1173 | ||
| 445284..445697 | - | 411 | 15897438 | - | SSO0514 | L | COG3547 | + | H | 2 | 1 | Third ORF in transposon ISC1229 | |
| 445862..446953 | + | 1089 | 15897439 | - | SSO0515 | - | - | + | H | 2 | 0 | Transposase ISC1359 | |
| 447076..447333 | - | 255 | 15897440 | - | SSO6008 | - | - | + | H | 1 | 2 | Second ORF in transposon ISC1229 | |
| 464828..465232 | - | 402 | 15897460 | - | SSO0536 | E | COG1586 | H | 1 | 1 | Conserved hypothetical protein | ||
| 470914..471864 | + | 948 | 15897465 | - | SSO0541 | L | COG3677 | H | 2 | 1 | Transposase ISC1173 | ||
| 666288..666677 | - | 387 | 15897686 | - | SSO0783 | - | - | H | 1 | 2 | Hypothetical protein | ||
| 687242..687691 | + | 447 | 15897705 | - | SSO0802 | - | - | H | 1 | 2 | Partial transposase in ISC1190 | ||
| 705264..705734 | - | 468 | 15897724 | - | SSO0823 | - | - | - | H | 1 | 1 | Hypothetical protein | |
| 705741..708023 | - | 2280 | 15897725 | - | SSO0825 | - | - | - | H | 0 | 0 | Hypothetical protein | |
| 708600..709052 | - | 450 | 15897727 | - | SSO0827 | - | - | - | H | 0 | 0 | Conserved hypothetical protein | |
| 709667..709972 | + | 303 | 15897728 | - | SSO0828 | - | - | - | H | 2 | 2 | +N 3.1 | Hypothetical protein |
| 710062..710967 | + | 903 | 15897729 | - | SSO0829 | Q | COG0500 | - | H | 1 | 0 | Conserved hypothetical protein | |
| 712831..713865 | - | 1032 | 15897731 | - | SSO0831 | M | COG1209 | H | 1 | 1 | Sugar phosphate nucleotydyl transferase | ||
| 852456..852767 | + | 309 | 15897870 | - | SSO0994 | K | COG1695 | H | 1 | 2 | Conserved hypothetical protein | ||
| 1004866..1005948 | + | 1080 | 15898019 | - | SSO1164 | L | COG3328 | H | 2 | 2 | Transposase ISC1250 | ||
| 1039799..1040275 | + | 474 | 15898050 | - | SSO1197 | - | - | H | 2 | 1 | First ORF in transposon ISC1217 | ||
| 1043804..1044325 | + | 519 | 15898056 | - | SSO1203 | - | - | H | 2 | 1 | Third ORF in transposon ISC1217 | ||
| 1070884..1071342 | - | 456 | 15898086 | - | SSO1237 | - | COG0419 | H | 2 | 2 | First ORF in transposon ISC1491 | ||
| 1072414..1072989 | + | 573 | 15898088 | - | SSO1240 | L | COG3547 | H | 1 | 1 | First ORF in partial transposon ISC1491 | ||
| 1076566..1077174 | - | 606 | 15898094 | - | SSO1250 | - | - | H | 1 | 2 | First ORF in transposon ISC1217 | ||
| 1077608..1077949 | - | 339 | 15898095 | - | SSO1251 | R | COG1708 | H | 1 | 1 | Conserved hypothetical protein | ||
| 1112085..1112411 | + | 324 | 15898129 | - | SSO1286 | - | - | H | 1 | 2 | Partial transposase ISC1250 | ||
| 1146469..1147014 | + | 543 | 15898157 | - | SSO1316 | - | - | H | 1 | 2 | First ORF in transposon ISC1316 | ||
| 1266099..1266701 | + | 600 | 15898251 | - | SSO1412 | - | - | + | H | 0 | 0 | Hypothetical protein | |
| 1267334..1267870 | + | 534 | 15898253 | - | SSO1414 | - | - | + | H | 2 | 0 | Partial transposase ISC1250 | |
| 1267917..1268147 | - | 228 | 15898254 | - | SSO7998 | - | - | + | H | 1 | 2 | +E 4.1 | Partial ORF in transposon ISC1491 |
| 1268756..1269445 | - | 687 | 15898255 | - | SSO1417 | L | COG3385 | + | H | 1 | 0 | Second ORF in transposon ISC1439 | |
| 1333044..1333433 | + | 387 | 15898304 | - | SSO1472 | - | - | + | H | 0 | 2 | First ORF in transposon ISC1439 | |
| 1333433..1334008 | + | 573 | 15898305 | - | SSO1473 | - | - | + | H | 1 | 0 | Second ORF in transposon ISC1439 | |
| 1334725..1335126 | + | 399 | 15898306 | - | SSO1474 | L | COG1943 | + | H | 0 | 2 | Transposase, putative | |
| 1335113..1336363 | + | 1248 | 15898307 | - | SSO1475 | L | COG0675 | + | H | 0 | 0 | Transposase ISC1476 | |
| 1336464..1336907 | - | 441 | 15898308 | - | SSO1478 | - | - | H | 1 | 1 | Second ORF in transposon ISC1212 | ||
| 1337632..1338525 | - | 891 | 15898310 | - | SSO1480 | - | - | + | H | 2 | 0 | Second ORF in transposon ISC1225 | |
| 1338701..1339660 | - | 957 | 15898311 | - | SSO1481 | - | - | + | H | 2 | 0 | Transposase ISC1234 | |
| 1339737..1339958 | - | 219 | 15898312 | - | SSO8189 | - | - | + | H | 2 | 2 | First ORF in transposon ISC1225 | |
| 1341275..1341523 | + | 246 | 15898314 | - | SSO8193 | - | - | + | H | 1 | 2 | +P 4.0 | First part of one of two inversely orientated ORFs in ISC1043 |
| 1341520..1341696 | + | 174 | 15898315 | - | SSO8194 | - | - | + | H | 1 | 2 | +L 3.1 | Second part of one of two inversely orientated ORFs in ISC1043 |
| 1501090..1501563 | - | 471 | 15898466 | - | SSO1648 | L | COG3328 | H | 2 | 2 | Second ORF in transposon ISC1250 | ||
| 1535273..1535605 | + | 330 | 15898495 | - | SSO1681 | L | COG0675 | H | 1 | 1 | Partial transposase in ISC1316 | ||
| 1540629..1541264 | - | 633 | 15898503 | - | SSO1688 | - | - | H | 2 | 1 | Partial transposase ISC1359 | ||
| 1548839..1549069 | + | 228 | 15898510 | - | SSO8725 | - | - | + | H | 1 | 2 | +E 4.1 | First ORF in transposon ISC1491 |
| 1549199..1549657 | + | 456 | 15898511 | - | SSO1697 | - | COG0419 | + | H | 2 | 2 | Second ORF in transposon ISC1491 | |
| 1549654..1550073 | + | 417 | 15898512 | - | SSO1699 | L | COG3547 | + | H | 2 | 2 | Third ORF in transposon ISC1491 | |
| 1551295..1552050 | - | 753 | 15898514 | - | SSO1703 | - | - | + | H | 2 | 1 | Partial transposase ISC1359 | |
| 1552366..1553097 | + | 729 | 15898515 | - | SSO1704 | - | - | + | H | 1 | 0 | First ORF in transposon ISC1229 | |
| 1553115..1553609 | + | 492 | 15898516 | - | SSO1705 | L | COG3415 | + | H | 0 | 0 | +K 3.6 | First ORF in transposon ISC1048 |
| 1554089..1554484 | + | 393 | 15898518 | - | SSO1708 | L | COG3547 | H | 1 | 1 | Second ORF in transposon ISC1229 | ||
| 1561586..1562044 | + | 456 | 15898527 | - | SSO1720 | - | COG1196 | H | 2 | 2 | Second ORF in transposon ISC1491 | ||
| 1562041..1562457 | + | 414 | 15898528 | - | SSO1722 | - | - | H | 2 | 2 | Third ORF in transposon ISC1491 | ||
| 1565429..1566493 | + | 1062 | 15898532 | - | SSO1728 | - | - | + | H | 2 | 0 | Transposase ISC1217 | |
| 1570608..1571558 | - | 948 | 15898535 | - | SSO1731 | L | COG3547 | + | H | 0 | 0 | Transposase ISC1190 | |
| 1571734..1572228 | + | 492 | 15898536 | - | SSO1732 | - | - | + | H | 2 | 1 | Partial ORF in transposase ISC1217 | |
| 1572325..1573257 | - | 930 | 15898537 | - | SSO1735 | - | - | + | H | 2 | 0 | Partial transposase ISC1359 | |
| 1581265..1581819 | - | 552 | 15898545 | - | SSO1744 | - | - | H | 1 | 1 | Second ORF in transposon ISC1058 | ||
| 1583348..1583689 | + | 339 | 15898548 | - | SSO1747 | - | - | H | 2 | 2 | Partial transposase in ISC1234 | ||
| 1625187..1625582 | - | 393 | 15898590 | - | SSO1791 | L | COG3547 | H | 1 | 1 | Second ORF in transposon ISC1229 | ||
| 1626062..1626556 | - | 492 | 15898592 | - | SSO1794 | L | COG3415 | + | H | 0 | 0 | +K 3.6 | First ORF in transposon ISC1048 |
| 1626574..1627305 | - | 729 | 15898593 | - | SSO1795 | - | - | + | H | 1 | 0 | First ORF in transposon ISC1229 | |
| 1627621..1628376 | + | 753 | 15898594 | - | SSO1796 | - | - | + | H | 2 | 1 | Partial transposase ISC1359 | |
| 1628665..1629027 | + | 360 | 15898596 | - | SSO1799 | - | - | + | H | 1 | 2 | Partial transposase in ISC1229 | |
| 1629186..1629626 | - | 438 | 15898597 | - | SSO1800 | - | - | + | H | 1 | 1 | Second ORF in transposon ISC1212 | |
| 1630290..1630517 | - | 225 | 15898599 | - | SSO8938 | - | - | + | H | 0 | 2 | +EK 4.7 4.0 | Hypothetical protein |
| 1630939..1631898 | - | 957 | 15898600 | - | SSO1801 | - | - | + | H | 2 | 0 | Transposase ISC1234 | |
| 1653672..1654013 | + | 339 | 15898625 | - | SSO1823 | - | - | H | 1 | 2 | Hypothetical protein | ||
| 1655768..1656211 | - | 441 | 15898627 | - | SSO1825 | - | - | H | 1 | 2 | Second ORF in transposon ISC1212 | ||
| 1667701..1669113 | + | 1410 | 15898642 | gapN-2 | SSO1842 | C | COG1012 | + | H | 0 | 0 | Glyceraldehyde-3-phosphate dehydrogenase, NADP dependent (gapN-2) | |
| 1669310..1670440 | + | 1128 | 15898643 | - | SSO1844 | L | COG0675 | + | H | 0 | 0 | Transposase ISC1316 | |
| 1670734..1671339 | + | 603 | 15898644 | - | SSO1845 | - | - | + | H | 2 | 0 | First ORF in transposon ISC1217 | |
| 1671467..1671913 | - | 444 | 15898645 | - | SSO1847 | - | - | + | H | 2 | 2 | +R 3.2 | Second ORF in transposon ISC1359 |
| 1671786..1672634 | - | 846 | 15898646 | - | SSO1850 | - | - | + | H | 2 | 0 | First ORF in transposon ISC1359 | |
| 1672677..1673162 | + | 483 | 15898647 | - | SSO1851 | - | - | + | H | 2 | 2 | Second ORF in transposon ISC1217 | |
| 1673441..1673848 | - | 405 | 15898648 | - | SSO1853 | - | - | + | H | 2 | 2 | +R 3.4 | Second ORF in transposon ISC1359 |
| 1673721..1674494 | - | 771 | 15898649 | - | SSO1856 | - | - | + | H | 2 | 0 | First ORF in transposon ISC1359 | |
| 1776732..1777148 | + | 414 | 15898757 | - | SSO1961 | - | - | H | 1 | 2 | Hypothetical protein | ||
| 1788560..1788904 | - | 342 | 15898772 | - | SSO1976 | S | COG0393 | + | H | 1 | 2 | Conserved hypothetical protein | |
| 1789959..1790714 | + | 753 | 15898774 | - | SSO1978 | - | - | + | H | 2 | 0 | First ORF in transposon ISC1225 | |
| 1790735..1791979 | - | 1242 | 15898775 | - | SSO1980 | L | COG3328 | + | H | 2 | 0 | Transposase ISC1332 | |
| 1792375..1794081 | + | 1704 | 15898777 | - | SSO1981 | - | COG1131 | + | H | 2 | 0 | Hypothetical protein, plasmid pNOB8 orfs 620 and 630A homolog | |
| 1794085..1796007 | + | 1920 | 15898778 | - | SSO1983 | - | - | + | H | 2 | 0 | Hypothetical protein | |
| 1796525..1796974 | + | 447 | 15898779 | - | SSO1984 | - | - | + | H | 0 | 2 | +NQW 3.0 4.0 4.5 | Hypothetical protein |
| 1869367..1869717 | + | 348 | 15898839 | - | SSO2048 | - | - | H | 1 | 1 | Hypothetical protein | ||
| 1925542..1925880 | + | 336 | 15898887 | - | SSO2103 | - | - | H | 1 | 2 | Third ORF in transposon ISC1225 | ||
| 1948939..1949301 | + | 360 | 15898908 | - | SSO2124 | L | COG0675 | H | 2 | 2 | Second ORF in transposon ISC1316 | ||
| 1970712..1971041 | - | 327 | 15898925 | - | SSO2142 | - | - | H | 2 | 2 | Hypothetical protein | ||
| 2122901..2123659 | - | 756 | 15899080 | - | SSO2322 | - | - | - | H | 0 | 0 | +Q 3.2 | Hypothetical protein |
| 2123734..2124657 | - | 921 | 15899081 | - | SSO2323 | - | - | - | H | 0 | 0 | Flagellin, putative | |
| 2124780..2125265 | + | 483 | 15899082 | - | SSO2324 | - | - | - | H | 0 | 0 | Hypothetical protein | |
| 2125249..2126718 | + | 1467 | 15899083 | - | SSO2325 | - | - | - | H | 1 | 0 | Hypothetical protein | |
| 2127091..2127492 | + | 399 | 15899084 | - | SSO2326 | - | - | - | H | 0 | 0 | Hypothetical protein | |
| 2127575..2128387 | + | 810 | 15899085 | - | SSO2327 | - | - | - | H | 0 | 0 | Hypothetical protein | |
| 2128401..2128889 | + | 486 | 15899086 | - | SSO2328 | - | - | - | H | 0 | 1 | Hypothetical protein | |
| 2128886..2129068 | + | 180 | 15899087 | - | SSO10224 | - | - | - | H | 1 | 2 | Hypothetical protein | |
| 2162297..2162611 | - | 312 | 15899125 | - | SSO2369 | - | - | H | 1 | 1 | Hypothetical protein | ||
| 2181477..2181932 | + | 453 | 15899147 | - | SSO2395 | - | - | H | 1 | 1 | Hypothetical protein | ||
| 2476070..2476447 | - | 375 | 15899438 | - | SSO2723 | - | - | H | 1 | 2 | First ORF in transposon ISC1229 | ||
| 2534652..2535008 | - | 354 | 15899492 | - | SSO2777 | - | - | H | 1 | 1 | Hypothetical protein | ||
| 2641293..2641598 | + | 303 | 15899599 | - | SSO2887 | - | - | + | H | 2 | 2 | +PW 4.1 3.6 | Hypothetical protein |
| 2641647..2641901 | + | 252 | 15899600 | - | SSO11389 | - | - | + | H | 1 | 2 | +PR 3.0 3.4 | First ORF in transposon ISC1225 |
| 2641841..2642149 | + | 306 | 15899601 | - | SSO2888 | - | - | + | H | 2 | 2 | +SW 3.4 3.5 | Second ORF in transposon ISC1225 |
| 2642034..2642774 | + | 738 | 15899602 | - | SSO2889 | - | - | + | H | 2 | 0 | Third ORF in transposon ISC1225 | |
| 2666239..2666625 | + | 384 | 15899629 | - | SSO2916 | - | - | H | 1 | 2 | First ORF in transposon ISC1058 | ||
| 2667810..2668310 | + | 498 | 15899633 | - | SSO2919 | - | - | H | 2 | 2 | Hypothetical protein | ||
| 2670385..2671350 | + | 963 | 15899635 | - | SSO2922 | - | - | + | H | 2 | 0 | Transposase ISC1439 | |
| 2672370..2672780 | + | 408 | 15899636 | - | SSO2924 | - | - | + | H | 2 | 2 | Partial transposase ISC1217 | |
| 2673614..2674066 | - | 450 | 15899638 | - | SSO2927 | L | COG3415 | + | H | 0 | 0 | +K 3.8 | First ORF in transposon ISC1048 |
| 2674428..2674727 | + | 297 | 15899639 | - | SSO2928 | - | - | + | H | 2 | 2 | +M 4.8 | First ORF in transposon ISC1234 |
| 2674752..2675360 | + | 606 | 15899640 | - | SSO2929 | - | - | + | H | 2 | 2 | Second ORF in transposon ISC1234 | |
| 2675378..2675872 | + | 492 | 15899641 | - | SSO2930 | L | COG3415 | + | H | 0 | 0 | +K 3.6 | First ORF in transposon ISC1048 |
| 2772494..2773108 | + | 612 | 15899730 | - | SSO3023 | - | - | + | H | 2 | 0 | Second ORF in transposase ISC1058 | |
| 2773247..2773726 | + | 477 | 15899731 | - | SSO3025 | - | - | + | H | 0 | 2 | One of two inversely orientated ORFs in ISC1043 | |
| 2773706..2774035 | - | 327 | 15899732 | - | SSO3026 | - | - | + | H | 2 | 2 | One of two inversely orientated ORFs in ISC1043 | |
| 2774114..2775244 | - | 1128 | 15899733 | - | SSO3027 | - | - | + | H | 2 | 0 | Transposase ISC1225 | |
| 2775506..2776465 | + | 957 | 15899734 | - | SSO3028 | - | - | + | H | 2 | 0 | Transposase ISC1234 | |
| 2779045..2779344 | - | 297 | 15899736 | - | SSO3030 | - | - | + | H | 1 | 2 | +V 3.1 | Third ORF in transposon ISC1212 |
| 2832250..2832648 | + | 396 | 15899781 | - | SSO3077 | - | - | H | 1 | 2 | Hypothetical protein | ||
| 2914470..2915096 | + | 624 | 15899869 | - | SSO3164 | - | - | H | 1 | 2 | Hypothetical protein | ||
| 2988382..2988735 | + | 351 | 15899944 | - | SSO3247 | - | - | H | 1 | 2 | Hypothetical protein |
