Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Rickettsia conorii Malish 7 (See the Abbreviations used):


Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
34740..35045 - 303 15891958 - RC0035 - - H 1 2 similarity to folate synthesis bifunctional protein
35819..36058 - 237 15891961 - RC0038 - - - H 0 2 similarity to folate synthesis bifunctional protein
37792..38109 - 315 15891963 - RC0040 - - - H 0 2 unknown
38531..38800 - 267 15891964 - RC0041 - - - H 1 2 +L 3.7 unknown
40072..40671 + 597 15891965 sco2 RC0042 - - - H 1 0 sco2 protein precursor
82937..83254 + 315 15892012 - RC0089 - - H 2 2 unknown
231723..232037 - 312 15892147 cutA RC0224 - - H 2 2 periplasmic divalent cation tolerance protein
271512..271868 + 354 15892191 - RC0268 - - + H 1 2 similarity to multidrug resistance protein (Atm1)
272417..272974 + 555 15892193 - RC0270 - - + H 1 1 similarity to multidrug resistance protein (Atm1)
273125..273352 + 225 15892194 - RC0271 - - + H 2 2 +H 4.2 similarity to multidrug resistance protein (Atm1)
274436..277153 + 2715 15892196 gyrA RC0273 - - + H 1 0 DNA gyrase subunit A [EC:5.99.1.3]
359385..359918 + 531 15892281 petA RC0358 - - H 2 1 cytochrome b6-f complex iron-sulfur subunit [EC:1.10.2.2]
467681..467929 + 246 15892394 - RC0471 - - - H 0 2 +K 3.0 unknown
468181..470700 - 2517 15892395 asmA RC0472 - - - H 0 0 outer membrane assembly protein
470986..471483 - 495 15892396 rimM RC0473 - - - H 1 0 16S rRNA processing protein RimM
471501..474176 + 2673 15892397 - RC0474 - - - H 1 0 unknown
474470..474772 + 300 15892399 - RC0476 - - - H 1 1 unknown
474762..475046 + 282 15892400 - RC0477 - - - H 1 1 unknown
490365..490850 + 483 15892419 - RC0496 - - H 1 2 unknown
510570..510908 + 336 15892444 - RC0521 - - H 1 2 unknown
535808..536254 + 444 15892469 dut RC0546 - - H 2 2 deoxyuridine 5-triphosphate nucleotidohydrolase [EC:3.6.1.23]
557487..558206 - 717 15892488 - RC0565 - - + H 1 0 similarity to probable RND efflux transporter
558213..558677 - 462 15892489 - RC0566 - - + H 1 2 +Q 4.8 similarity to probable RND efflux transporter
558725..559237 - 510 15892490 - RC0567 - - + H 1 0 +T 3.3 similarity to probable RND efflux transporter
559429..559938 - 507 15892491 - RC0568 - - + H 1 1 similarity to probable RND efflux transporter
560007..560225 - 216 15892492 - RC0569 - - + H 2 2 +T 4.1 similarity to probable RND efflux transporter
560770..561066 - 294 15892493 - RC0570 - - + H 1 2 unknown
591473..591982 - 507 15892528 - RC0605 - - - H 1 0 unknown
592575..592937 - 360 15892529 rbfA RC0606 - - - H 0 2 ribosome-binding factor A
592934..593368 - 432 15892530 - RC0607 - - - H 2 0 +F 4.2 unknown
593511..594032 + 519 15892531 - RC0608 - - - H 1 0 +F 3.4 unknown
595668..596174 - 504 15892533 - RC0610 - - - H 1 0 unknown
687797..688501 - 702 15892639 - RC0716 - - - H 2 0 unknown
688449..689090 - 639 15892640 - RC0717 - - - H 1 0 +I 3.6 unknown
689681..690934 - 1251 15892641 ampG1 RC0718 - - - H 1 0 ampG protein
691691..691891 + 198 15892643 - RC0720 - - - H 2 2 similarity to lipopolysaccharide 1,2-glucosyltransferase (rfaJ)
701195..701527 - 330 15892651 hesB2 RC0728 - - H 1 2 hesB protein
729531..730004 - 471 15892688 infC RC0765 - - H 1 1 translation initiation factor IF-3
744942..745250 - 306 15892711 - RC0788 - - H 1 2 similarity to MazG
809497..809946 - 447 15892781 - RC0858 - - H 1 2 unknown
843158..843679 + 519 15892820 ppa RC0897 - - H 1 1 inorganic pyrophosphatase [EC:3.6.1.1]
1014506..1014829 - 321 15893010 - RC1087 - - H 1 2 unknown
1019652..1020005 - 351 15893017 - RC1094 - - H 1 1 unknown
1046323..1046793 - 468 15893052 - RC1129 - - H 1 1 unknown
1049216..1049536 - 318 15893058 - RC1135 - - H 2 2 similarity to acetyl-CoA acetyltransferase
1134472..1135491 - 1017 15893153 nuoH RC1230 - - + H 0 0 NADH dehydrogenase I chain H [EC:1.6.5.3]
1135580..1137610 - 2028 15893154 nuoG RC1231 - - + H 0 0 NADH dehydrogenase I chain G [EC:1.6.5.3]
1138123..1140759 - 2634 15893156 acnA RC1233 - - + H 0 0 aconitate hydratase [EC:4.2.1.3]
1140941..1141279 - 336 15893157 atpC RC1234 - - + H 1 2 ATP synthase epsilon chain [EC:3.6.1.34]
1141337..1142836 - 1497 15893158 atpD RC1235 - - + H 2 0 ATP synthase beta chain [EC:3.6.1.34]
1144035..1145636 - 1599 15893160 atpA RC1237 - - + H 1 0 ATP synthase alpha chain [EC:3.6.1.34]
1159820..1160227 - 405 15893178 - RC1255 - - H 1 2 unknown
1203438..1203755 + 315 15893224 - RC1301 - - H 2 1 unknown
1222866..1223495 - 627 15893243 - RC1320 - - H 1 1 unknown

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