Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Mycobacterium tuberculosis (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
11874..12311 - 435 15607150 - Rv0008c - - H 1 1 hypothetical protein Rv0008c
13133..13558 - 423 15607152 - Rv0010c - - H 1 1 hypothetical protein Rv0010c
64989..65414 + 423 15607203 - Rv0061 - - H 1 2 hypothetical protein Rv0061
184721..185053 + 330 15607298 pntAB Rv0156 C COG3288 H 1 2 pntAB
274304..274984 - 678 15607370 - Rv0229c - - H 1 1 hypothetical protein Rv0229c
363474..363776 + 300 15607440 - Rv0299 - - H 1 2 hypothetical protein Rv0299
506559..506969 - 408 15607561 - Rv0420c - - H 1 2 hypothetical protein Rv0420c
545373..545819 - 444 15607596 - Rv0455c - - H 2 1 hypothetical protein Rv0455c
577662..578267 + 603 15607629 - Rv0488 R COG1279 H 1 1 hypothetical protein Rv0488
616221..616829 + 606 15607665 - Rv0525 G COG0406 + H 0 0 hypothetical protein Rv0525
616844..617494 + 648 15607666 - Rv0526 O COG0526 + H 0 0 hypothetical protein Rv0526
617491..618270 + 777 15607667 ccsA Rv0527 O COG0785 + H 1 0 +V 3.2 ccsA
618303..619892 + 1587 15607668 - Rv0528 O COG1333 + H 1 0 hypothetical protein Rv0528
619889..620863 + 972 15607669 ccsB Rv0529 O COG0755 + H 0 0 ccsB
620905..622122 + 1215 15607670 - Rv0530 D COG0455 + H 0 0 hypothetical protein Rv0530
625560..626438 - 876 15607674 menA Rv0534c H COG1575 + H 0 0 menA
627246..628286 + 1038 15607676 galE2 Rv0536 M COG0451 + H 0 0 galE2
630038..631684 + 1644 15607678 - Rv0538 - - + H 1 1 +PT 4.1 4.3 hypothetical protein Rv0538
631741..632373 + 630 15607679 - Rv0539 M COG0463 + H 1 0 hypothetical protein Rv0539
632370..633032 + 660 15607680 - Rv0540 S COG3222 + H 0 0 hypothetical protein Rv0540
665040..665381 - 339 15607712 - Rv0572c - - H 1 2 hypothetical protein Rv0572c
697902..698525 - 621 15607740 - Rv0600c T COG0642 + H 0 0 hypothetical protein Rv0600c
698522..698992 - 468 15607741 - Rv0601c T COG0642 + H 0 0 +T 3.2 hypothetical protein Rv0601c
699036..699797 - 759 15607742 tcrA Rv0602c T COG0745 + H 0 0 tcrA
699854..700165 + 309 15607743 - Rv0603 - - + H 2 1 hypothetical protein Rv0603
700237..701187 + 948 15607744 lpqO Rv0604 - - + H 1 0 lpqO
740232..741137 - 903 15607786 lipG Rv0646c R COG0596 + H 1 0 lipG
741149..742615 - 1464 15607787 - Rv0647c R COG0661 + H 1 0 hypothetical protein Rv0647c
742717..746364 + 3645 15607788 - Rv0648 G COG0383 + H 1 0 hypothetical protein Rv0648
746361..747035 + 672 15607789 fadD37 Rv0649 - - + H 2 0 +A 3.0 fadD37
747035..747943 + 906 15607790 - Rv0650 K COG1940 + H 2 0 hypothetical protein Rv0650
748847..749239 + 390 15607792 rplL Rv0652 J COG0222 + H 1 2 +EK 4.0 5.9 rplL
749232..749927 - 693 15607793 - Rv0653c K COG1309 + H 0 0 hypothetical protein Rv0653c
749998..751503 + 1503 15607794 - Rv0654 Q COG3670 + H 0 0 hypothetical protein Rv0654
754683..754991 - 306 15607799 - Rv0659c T COG2337 H 1 2 hypothetical protein Rv0659c
874231..874941 + 708 15607921 ptrBb Rv0781 E COG1770 H 1 2 ptrBb
1101023..1101478 - 453 15608125 mscL Rv0985c M COG1970 H 1 1 mscL
1101801..1102547 + 744 15608126 - Rv0986 R COG1136 H 2 1 hypothetical protein Rv0986
1105114..1106274 + 1158 15608128 - Rv0988 - - H 2 2 hypothetical protein Rv0988
1353155..1353523 + 366 15608349 - Rv1209 - - H 1 2 hypothetical protein Rv1209
1376974..1377501 + 525 15608374 - Rv1234 - - H 1 2 hypothetical protein Rv1234
1508541..1508921 - 378 15608483 - Rv1343c - - H 1 2 hypothetical protein Rv1343c
1508966..1509286 + 318 15608484 - Rv1344 I COG0236 H 1 2 hypothetical protein Rv1344
1524027..1524818 - 789 15608496 - Rv1356c - - H 2 2 hypothetical protein Rv1356c
1690333..1690803 + 468 15608637 - Rv1499 - - - H 1 2 +H 3.4 hypothetical protein Rv1499
1690848..1691876 + 1026 15608638 - Rv1500 M COG0463 - H 2 1 hypothetical protein Rv1500
1691888..1692709 + 819 15608639 - Rv1501 - - - H 2 2 hypothetical protein Rv1501
1692922..1693821 + 897 15608640 - Rv1502 - - - H 2 0 hypothetical protein Rv1502
1693994..1694542 - 546 15608641 - Rv1503c M COG0399 - H 1 0 hypothetical protein Rv1503c
1694543..1695142 - 597 15608642 - Rv1504c M COG0399 - H 0 0 hypothetical protein Rv1504c
1695279..1695944 - 663 15608643 - Rv1505c R COG0110 - H 2 0 hypothetical protein Rv1505c
1695941..1696441 - 498 15608644 - Rv1506c Q COG0500 - H 2 2 +CY 3.0 3.4 hypothetical protein Rv1506c
1696725..1697420 - 693 15608645 - Rv1507c - - - H 2 2 +Y 3.8 hypothetical protein Rv1507c
1698093..1699892 - 1797 15608646 - Rv1508c - - - H 0 0 hypothetical protein Rv1508c
1700210..1701091 + 879 15608647 - Rv1509 - - - H 2 0 hypothetical protein Rv1509
1775390..1776703 + 1311 15608706 bioA Rv1568 H COG0161 + H 1 0 bioA
1776700..1777860 + 1158 15608707 bioF Rv1569 H COG0156 + H 2 0 bioF
1777857..1778537 + 678 15608708 bioD Rv1570 H COG0132 + H 2 0 bioD
1778537..1779046 + 507 15608709 - Rv1571 - - + H 1 0 hypothetical protein Rv1571
1779192..1779275 - 81 15608710 - Rv1572c - - + H 0 2 +ADHNSV -3.9 4.5 16.3 5.8 -3.1 -3.6 hypothetical protein Rv1572c
1779312..1779722 + 408 15608711 - Rv1573 - - + H 1 0 hypothetical protein Rv1573
1779928..1780239 + 309 15608712 - Rv1574 - - H 1 2 hypothetical protein Rv1574
1865574..1866632 + 1056 15608790 argC Rv1652 E COG0002 + H 0 0 argC
1866629..1867843 + 1212 15608791 argJ Rv1653 R COG1364 + H 1 0 argJ
1867840..1868724 + 882 15608792 argB Rv1654 E COG0548 + H 1 0 argB
1868721..1869923 + 1200 15608793 argD Rv1655 E COG0160 + H 1 0 argD
1869920..1870843 + 921 15608794 argF Rv1656 E COG0078 + H 1 0 argF
1870840..1871352 + 510 15608795 argR Rv1657 E COG1438 + H 2 0 argR
1871361..1872557 + 1194 15608796 argG Rv1658 E COG0137 + H 1 0 argG
1872637..1874049 + 1410 15608797 argH Rv1659 E COG0165 + H 1 0 argH
1874158..1875219 + 1059 15608798 pks10 Rv1660 Q COG3424 + H 0 0 pks10
1950630..1951049 - 417 15608862 - Rv1724c - - H 2 2 hypothetical protein Rv1724c
1986852..1987694 - 840 15608893 plcD Rv1755c M COG3511 H 1 2 plcD
2006634..2006945 + 309 15608910 - Rv1772 - - H 1 2 hypothetical protein Rv1772
2047685..2048032 - 345 15608942 - Rv1805c - - H 1 2 hypothetical protein Rv1805c
2073941..2074435 + 492 15608966 - Rv1829 S COG1259 H 1 1 hypothetical protein Rv1829
2087255..2087650 - 393 15608975 - Rv1838c R COG1848 H 1 2 hypothetical protein Rv1838c
2131905..2132327 - 420 15609018 lppE Rv1881c - - H 1 2 lppE
2133729..2134259 - 528 15609021 - Rv1884c - - H 1 2 hypothetical protein Rv1884c
2150952..2151383 + 429 15609041 - Rv1904 T COG1366 H 1 2 hypothetical protein Rv1904
2152423..2152893 - 468 15609043 - Rv1906c - - H 1 2 hypothetical protein Rv1906c
2194968..2195345 - 375 15609080 - Rv1943c - - H 1 2 hypothetical protein Rv1943c
2199996..2200187 - 189 15609087 - Rv1950c - - - H 1 2 +HW 3.3 4.6 hypothetical protein Rv1950c
2200936..2201247 + 309 15609090 - Rv1953 R COG1487 - H 0 2 hypothetical protein Rv1953
2201221..2201742 - 519 15609091 - Rv1954c - - - H 1 2 +H 3.3 hypothetical protein Rv1954c
2201582..2202094 + 510 15609092 - Rv1955 - - - H 1 1 +K 3.5 hypothetical protein Rv1955
2203016..2203630 - 612 15609095 - Rv1958c - - H 1 2 hypothetical protein Rv1958c
2204864..2205271 - 405 15609099 - Rv1962c - - H 1 2 hypothetical protein Rv1962c
2234303..2234647 - 342 15609128 - Rv1991c T COG2337 H 1 2 hypothetical protein Rv1991c
2259324..2259818 + 492 15609149 - Rv2012 - - H 1 1 hypothetical protein Rv2012
2261003..2261671 + 666 15609151 - Rv2014 L COG3547 H 1 1 hypothetical protein Rv2014
2338063..2338503 - 438 15609218 - Rv2081c - - H 1 2 hypothetical protein Rv2081c
2343261..2343914 + 651 15609223 - Rv2086 - - H 1 2 hypothetical protein Rv2086
2367709..2368440 + 729 15609245 PPE Rv2108 - - H 2 1 PPE
2414932..2416392 - 1458 15609292 murD Rv2155c M COG0771 + H 1 0 murD
2417470..2419002 - 1530 15609294 murF Rv2157c M COG0770 + H 1 0 murF
2418999..2420606 - 1605 15609295 murE Rv2158c M COG0769 + H 2 0 murE
2420629..2421663 - 1032 15609296 - Rv2159c - - + H 2 0 hypothetical protein Rv2159c
2421660..2422001 - 339 15609297 - Rv2160c - - + H 1 2 hypothetical protein Rv2160c
2422269..2423135 - 864 15609298 - Rv2161c C COG2141 + H 2 0 hypothetical protein Rv2161c
2423238..2424836 - 1596 15609299 PE_PGRS Rv2162c - - + H 2 0 +GN 6.8 3.8 PE_PGRS
2527982..2528485 + 501 15609390 - Rv2253 - - H 1 2 hypothetical protein Rv2253
2544696..2545223 + 525 15609407 lppN Rv2270 - - H 1 2 lppN
2561326..2561703 + 375 15609425 - Rv2288 - - H 1 2 hypothetical protein Rv2288
2583433..2583777 + 342 15609447 - Rv2310 - - H 1 2 hypothetical protein Rv2310
2613105..2614061 - 954 15609475 moeW Rv2338c H COG0476 H 2 2 moeW
2727334..2727918 - 582 15609567 PPE Rv2430c - - - H 1 2 PPE
2727965..2728264 - 297 15609568 PE Rv2431c - - - H 1 2 PE
2728435..2728845 - 408 15609569 - Rv2432c - - - H 1 2 +CM 4.8 3.3 hypothetical protein Rv2432c
2806663..2807286 + 621 15609628 - Rv2491 R COG1611 H 1 1 hypothetical protein Rv2491
2807276..2808028 + 750 15609629 - Rv2492 - - H 2 2 hypothetical protein Rv2492
2860450..2861142 + 690 15609673 - Rv2536 - - + H 0 0 hypothetical protein Rv2536
2861146..2861589 - 441 15609674 aroD Rv2537c E COG0757 + H 0 0 aroD
2861586..2862674 - 1086 15609675 aroB Rv2538c E COG0337 + H 1 0 aroB
2862671..2863201 - 528 15609676 aroK Rv2539c E COG0703 + H 2 0 aroK
2863205..2864410 - 1203 15609677 aroF Rv2540c E COG0082 + H 2 0 aroF
2864425..2864832 + 405 15609678 - Rv2541 - - + H 2 0 +A 4.6 hypothetical protein Rv2541
2881756..2882145 + 387 15609699 - Rv2562 - - H 1 2 hypothetical protein Rv2562
3031037..3031534 - 495 15609856 - Rv2719c - - H 1 2 hypothetical protein Rv2719c
3076364..3076717 - 351 15609904 - Rv2767c - - H 1 2 hypothetical protein Rv2767c
3082906..3083367 + 459 15609912 - Rv2775 K COG0454 H 2 2 hypothetical protein Rv2775
3085710..3086180 - 468 15609915 - Rv2778c - - H 1 1 hypothetical protein Rv2778c
3123964..3124980 - 1014 15609954 - Rv2817c S COG1518 - H 1 0 hypothetical protein Rv2817c
3124993..3126141 - 1146 15609955 - Rv2818c - - - H 1 0 hypothetical protein Rv2818c
3126237..3127364 - 1125 15609956 - Rv2819c S COG1332 - H 1 0 hypothetical protein Rv2819c
3127361..3128269 - 906 15609957 - Rv2820c S COG1567 - H 0 0 hypothetical protein Rv2820c
3217824..3218267 - 441 15610047 - Rv2910c - - H 2 2 hypothetical protein Rv2910c
3242967..3243278 + 309 15610066 - Rv2929 - - H 1 2 hypothetical protein Rv2929
3299968..3300567 - 597 15610086 - Rv2949c H COG3161 - H 2 1 hypothetical protein Rv2949c
3300593..3302452 - 1857 15610087 fadD29 Rv2950c I COG0318 - H 1 0 fadD29
3303100..3304245 - 1143 15610088 - Rv2951c C COG2141 - H 1 0 hypothetical protein Rv2951c
3304438..3305250 + 810 15610089 - Rv2952 Q COG0500 - H 0 0 hypothetical protein Rv2952
3305276..3306532 + 1254 15610090 - Rv2953 S COG3268 - H 0 0 hypothetical protein Rv2953
3308665..3309396 + 729 15610093 - Rv2956 Q COG0500 - H 2 0 hypothetical protein Rv2956
3312098..3312835 - 735 15610096 - Rv2959c Q COG3510 H 2 2 hypothetical protein Rv2959c
3430384..3430707 + 321 15610202 emrE Rv3065 P COG2076 H 1 2 emrE
3477057..3477497 + 438 15610245 - Rv3108 - - - H 1 2 +C 4.4 hypothetical protein Rv3108
3477646..3478725 + 1077 15610246 moaA Rv3109 H COG2896 - H 2 0 moaA
3478776..3479171 + 393 15610247 moaB Rv3110 H COG2154 - H 2 2 moaB
3479168..3479680 + 510 15610248 moaC Rv3111 H COG0315 - H 2 2 moaC
3480071..3480739 + 666 15610250 - Rv3113 - - - H 2 0 +Q 3.1 hypothetical protein Rv3113
3480756..3481286 + 528 15610251 - Rv3114 F COG0590 - H 1 1 hypothetical protein Rv3114
3482773..3483942 + 1167 15610253 moeB Rv3116 P COG0607 - H 2 0 moeB
3485129..3485572 + 441 15610256 moaE Rv3119 H COG0314 - H 2 2 moaE
3486506..3487708 + 1200 15610258 - Rv3121 Q COG2124 - H 1 0 hypothetical protein Rv3121
3509115..3509543 - 426 15610278 - Rv3142c - - H 1 1 hypothetical protein Rv3142c
3540879..3541361 - 480 15610308 - Rv3172c - - H 1 2 hypothetical protein Rv3172c
3550712..3551041 + 327 15610319 - Rv3183 - - H 1 2 hypothetical protein Rv3183
3554295..3554642 + 345 15610324 - Rv3188 - - H 1 2 hypothetical protein Rv3188
3660647..3661165 - 516 15610414 - Rv3278c - - H 1 1 hypothetical protein Rv3278c
3671841..3672293 - 450 15610427 - Rv3291c K COG1522 H 1 1 hypothetical protein Rv3291c
3768732..3769076 - 342 15610489 - Rv3353c C COG0277 H 1 2 hypothetical protein Rv3353c
3792354..3793244 - 888 15610514 - Rv3378c - - H 2 2 hypothetical protein Rv3378c
3799631..3799939 - 306 15610521 - Rv3385c - - H 1 2 hypothetical protein Rv3385c
3841710..3842072 - 360 15610560 - Rv3424c - - H 2 2 hypothetical protein Rv3424c
3842235..3842765 + 528 15610561 PPE Rv3425 - - H 2 2 PPE
3843032..3843730 + 696 15610562 PPE Rv3426 - - H 2 2 PPE
3931001..3936706 + 5703 15610644 PE_PGRS Rv3508 - - + H 2 2 +G 8.8 PE_PGRS
3939613..3941757 + 2142 15610647 PE_PGRS Rv3511 - - + H 2 0 +G 7.4 PE_PGRS
3941720..3944959 + 3237 15610648 PE_PGRS Rv3512 - - + H 2 2 +GLNV 9.8 -3.7 3.2 -3.0 PE_PGRS
3964475..3965188 - 711 15610664 - Rv3528c - - H 2 2 hypothetical protein Rv3528c
4025053..4025541 - 486 15610719 - Rv3583c K COG1329 H 2 2 hypothetical protein Rv3583c
4054809..4055120 - 309 15610751 - Rv3615c - - H 2 2 hypothetical protein Rv3615c
4129320..4129688 - 366 15610823 - Rv3687c T COG1366 H 2 2 hypothetical protein Rv3687c
4197625..4198134 - 507 15610885 - Rv3749c - - H 1 1 hypothetical protein Rv3749c
4282446..4283996 + 1548 15610954 - Rv3818 - - - H 0 0 hypothetical protein Rv3818
4283993..4284328 + 333 15610955 - Rv3819 - - - H 0 2 hypothetical protein Rv3819
4284416..4285822 - 1404 15610956 papA2 Rv3820c - - - H 2 0 papA2
4285970..4286683 + 711 15610957 - Rv3821 - - - H 0 0 hypothetical protein Rv3821
4286718..4287932 + 1212 15610958 - Rv3822 - - - H 1 0 hypothetical protein Rv3822
4288257..4291526 - 3267 15610959 mmpL8 Rv3823c R COG2409 - H 1 0 mmpL8
4291636..4293171 - 1533 15610960 papA1 Rv3824c - - - H 2 0 papA1
4320701..4321324 + 621 15610982 sodA Rv3846 P COG0605 H 1 1 sodA
4321535..4322068 + 531 15610983 - Rv3847 - - H 1 2 hypothetical protein Rv3847
4341563..4341874 + 309 15611001 - Rv3865 - - H 2 2 hypothetical protein Rv3865
4387362..4387892 - 528 15611038 - Rv3902c - - H 2 2 hypothetical protein Rv3902c

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