Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Methanobacterium thermoautotrophicum (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
39469..39813 - 342 15678092 - MTH63 S COG0599 H 1 2 conserved protein
40384..40662 - 276 15678093 - MTH64 - - - H 2 2 +DFL -3.0 4.2 3.9 unknown
40646..41029 - 381 15678094 - MTH65 - - - H 2 2 +IY 3.7 3.0 unknown
41052..41273 - 219 15678095 - MTH66 - - - H 2 2 unknown
41393..41575 - 180 15678096 - MTH67 R COG0457 - H 2 2 +KQV 8.2 5.5 -3.6 unknown
41517..42203 - 684 15679902 - MTH68 R COG0457 - H 2 2 +K 4.1 TPR-repeat-containing protein
42385..42642 - 255 15678097 - MTH69 - - - H 2 2 +F 4.0 unknown
42661..42846 - 183 15678098 - MTH70 - - - H 2 2 +IVY 3.3 -3.6 6.4 unknown
42843..43109 - 264 15678099 - MTH71 - - - H 2 2 unknown
43227..44438 - 1209 15678100 - MTH72 R COG0457 - H 2 2 +K 4.7 O-linked GlcNAc transferase
44435..45385 - 948 15678101 - MTH73 - - - H 1 0 unknown
45402..45677 - 273 15678102 - MTH74 - - - H 2 2 +LWY 4.0 3.2 3.6 unknown
45658..48171 - 2511 15678103 - MTH75 R COG3291 - H 1 0 surface protease related protein
48369..48749 - 378 15678104 - MTH76 - - - H 2 2 +QS 3.1 3.7 unknown
48867..49274 - 405 15678105 - MTH77 - - - H 2 2 +I 3.6 unknown
49405..49647 - 240 15678106 - MTH78 - - - H 2 2 +FY 3.7 4.4 unknown
49661..50164 - 501 15678107 - MTH79 - - - H 2 1 unknown
50180..50425 - 243 15678108 - MTH80 - - - H 2 2 +FLW 3.6 4.5 3.7 unknown
50538..51182 - 642 15678109 - MTH81 - - - H 2 2 +Y 4.0 unknown
51302..51484 - 180 15678110 - MTH82 R COG0457 - H 2 2 +KQV 8.2 5.5 -3.6 unknown
51426..52565 - 1137 15678111 - MTH83 R COG0457 - H 2 2 +K 4.5 O-linked GlcNAc transferase
52562..53164 - 600 15678112 - MTH84 - - - H 1 2 +W 3.5 unknown
53284..53409 + 123 15678113 - MTH85 - - - H 2 2 +DGIN -3.0 -3.5 4.3 5.6 unknown
53629..54045 - 414 15678114 - MTH86 - - - H 2 2 +IL 4.2 3.3 unknown
54150..56672 - 2520 15678115 - MTH87 R COG3291 - H 1 0 surface protease related protein
56672..56779 - 105 15678116 - MTH88 - - - H 2 2 +HQ 3.4 3.3 unknown
56940..57119 - 177 15678117 - MTH89 - - - H 2 2 +LW 3.8 7.7 unknown
57204..57596 - 390 15678118 - MTH90 - - - H 2 2 +FL 4.1 3.4 unknown
57581..57808 - 225 15678119 - MTH91 - - - H 2 2 +WY 11.0 3.1 unknown
57999..58211 - 210 15678120 - MTH92 - - - H 1 2 +DL -3.0 3.2 unknown
58390..58758 - 366 15678121 - MTH93 - - - H 2 2 +L 3.0 unknown
58795..59067 - 270 15678122 - MTH94 - - - H 1 2 +KWY 3.0 10.4 3.7 unknown
59128..59583 - 453 15678123 - MTH95 - - - H 1 2 unknown
59620..60189 - 567 15678124 - MTH96 R COG3271 - H 1 0 conserved protein
60818..60943 - 123 15678126 - MTH98 - - - H 1 2 unknown
61183..61362 - 177 15678127 - MTH99 - - - H 2 2 unknown
69681..70118 + 435 15678137 - MTH109 - - H 2 2 unknown
71214..71708 - 492 15678140 - MTH112 - - H 1 1 unknown
104860..105375 + 513 15678186 - MTH158 P COG1528 H 1 1 ferritin like protein (RsgA)
161715..162128 - 411 15678247 - MTH219 - - H 1 2 unknown
225689..226198 - 507 15678318 - MTH290 - - H 1 2 unknown
229663..230127 - 462 15678322 - MTH294 - - H 1 1 unknown
255790..255951 - 159 15678347 - MTH319 - - - H 1 2 +HP 3.4 3.5 unknown
257029..257310 + 279 15678349 - MTH321 S COG1598 - H 2 2 unknown
257447..257557 - 108 15678350 - MTH322 - - - H 2 2 +N 3.2 unknown
257970..258872 - 900 15678351 - MTH323 - - - H 2 0 unknown
258876..259217 - 339 15678352 - MTH324 - - - H 2 1 unknown
259228..260091 - 861 15678353 - MTH325 S COG1336 - H 2 0 unknown
260084..262957 - 2871 15678354 - MTH326 - - - H 2 0 unknown
262944..263729 - 783 15678355 - MTH327 - - - H 2 0 unknown
263726..264481 - 753 15678356 - MTH328 - - - H 1 1 unknown
264747..265301 + 552 15678357 - MTH329 - - - H 0 0 unknown
266738..267403 + 663 15678359 - MTH331 M COG0463 - H 0 0 mannosyltransferase
267523..268725 + 1200 15678360 - MTH332 M COG0438 - H 2 0 LPS biosynthesis RfbU related protein
268722..269768 + 1044 15678361 - MTH333 M COG1089 - H 2 0 GDP-D-mannose dehydratase
269765..270856 + 1089 15678362 - MTH334 M COG0399 - H 2 0 perosamine synthetase
270853..271974 + 1119 15678363 - MTH335 M COG0438 - H 2 0 galactosyl-transferase RfpB related protein
271965..272486 + 519 15678364 - MTH336 K COG0454 - H 2 2 conserved protein
272491..273396 + 903 15678365 - MTH337 - - - H 2 1 +N 4.0 unknown
273587..274639 + 1050 15678366 - MTH338 M COG0438 - H 2 1 +N 3.2 LPS biosynthesis RfbU related protein
274636..276720 + 2082 15678367 - MTH339 - - - H 1 0 unknown
276957..278159 + 1200 15678368 - MTH340 S COG2327 - H 2 1 conserved protein
289046..289636 + 588 15678378 - MTH350 R COG1988 H 1 1 conserved protein
335628..336008 + 378 15678424 - MTH396 S COG4084 H 1 1 conserved protein
344755..345174 + 417 15678436 - MTH408 R COG1708 H 2 2 unknown
350625..352034 + 1407 15678442 - MTH414 E COG0367 + H 1 0 asparagine synthetase
352234..352449 + 213 15678443 - MTH415 J COG0721 + H 0 2 +E 5.3 conserved protein
352450..352938 + 486 15678444 - MTH416 E COG2061 + H 1 1 conserved protein
352939..353961 + 1020 15678445 - MTH417 E COG0460 + H 1 0 homoserine dehydrogenase homolog
353983..355191 + 1206 15678446 - MTH418 G COG3635 + H 0 0 phosphonopyruvate decarboxylase related protein
403877..404314 - 435 15678491 - MTH463 S COG2445 H 2 2 unknown
404307..404768 - 459 15678492 - MTH464 R COG1708 H 2 1 unknown
436138..436665 + 525 15678524 - MTH496 L COG1194 H 2 2 endonuclease III homolog
448515..450218 + 1701 15678530 - MTH502 S COG1700 + H 1 0 unknown
450318..450641 - 321 15678531 - MTH503 R COG2018 + H 0 0 conserved protein
450678..451721 - 1041 15678532 - MTH504 S COG4007 + H 0 0 H(2)-dependent N5,N10-methylenetetrahydromethanopterin dehydrogenase homolog (III)
451936..452706 + 768 15678533 - MTH505 P COG1226 + H 1 0 potassium channel related protein
452709..453359 - 648 15678534 - MTH506 - - + H 1 0 unknown
453356..453760 - 402 15678535 - MTH507 S COG0393 + H 0 0 conserved protein
467632..468126 + 492 15678549 - MTH521 - - H 1 2 unknown
470721..470930 + 207 15678555 - MTH527 - - + H 1 2 +E 5.1 unknown
471013..471678 - 663 15678556 - MTH528 R COG2068 + H 1 0 unknown
472825..474873 - 2046 15678558 - MTH530 M COG0769 + H 1 0 UDP-N-acetylmuramyl tripeptide synthetase related protein
474887..475825 - 936 15678559 - MTH531 M COG0771 + H 0 0 UDP-N-acetylmuramyl tripeptide synthetase related protein
476117..477331 - 1212 15678560 - MTH532 M COG0771 + H 0 0 UDP-N-acetylmuramyl tripeptide synthetase related protein
487252..488277 - 1023 15678570 - MTH542 R COG0433 + H 1 0 conserved protein
488274..489338 - 1062 15678571 - MTH543 - - + H 0 0 unknown
490024..491337 + 1311 15678573 - MTH545 - - + H 1 0 conserved protein
491431..492705 + 1272 15678574 - MTH546 E COG0531 + H 2 0 cationic amino acid transporter related protein
494927..496579 - 1650 15678578 - MTH550 L COG1796 + H 1 0 DNA-dependent DNA polymerase family X
513400..514191 - 789 15678599 - MTH571 D COG3640 H 2 2 nitrogenase reductase related protein
514741..515379 - 636 15678602 - MTH574 R COG1853 H 2 1 conserved protein
515880..516380 - 498 15678604 - MTH576 E COG1387 H 1 2 conserved protein
559679..560248 + 567 15678655 - MTH627 - - H 1 1 unknown
618281..618877 + 594 15678721 - MTH694 - - H 2 1 unknown
621669..622259 - 588 15678725 - MTH698 - - H 1 2 unknown
635705..641068 - 5361 15678741 - MTH714 S COG1572 - H 2 0 magnesium chelatase subunit
641135..642088 - 951 15678742 - MTH715 - - - H 2 2 +NTY 3.3 3.0 3.1 conserved protein
642278..647545 - 5265 15678743 - MTH716 P COG3420 - H 2 2 +NT 5.7 3.9 cell surface glycoprotein (s-layer protein)
647672..649012 - 1338 15678744 - MTH717 - - - H 2 2 +NTY 6.0 3.7 3.9 unknown
649321..649542 + 219 15678745 - MTH718 S COG1602 - H 0 2 +PW 4.5 4.3 unknown
649708..651432 - 1722 15678746 - MTH719 P COG3420 - H 2 0 +NT 5.4 3.3 cell surface glycoprotein (s-layer protein)
710753..711130 - 375 15678807 - MTH783 R COG0375 H 1 2 hydrogenase expression/formation protein HypA
785879..786631 + 750 15678884 - MTH864 - - H 2 2 conserved protein
826614..828710 + 2094 15678931 - MTH911 - - - H 1 1 +NS 6.0 3.5 probable surface protein
830963..832264 - 1299 15678933 - MTH913 - - - H 1 0 unknown
832280..833545 - 1263 15678934 - MTH914 - - - H 1 0 unknown
833677..834300 + 621 15678935 - MTH915 - - - H 2 0 unknown
834378..834746 + 366 15678936 - MTH916 S COG1356 - H 2 1 conserved protein
834824..835366 + 540 15678937 - MTH917 C COG2191 - H 2 1 molybdenum formylmethanofuran dehydrogenase, subunit E
835384..836586 + 1200 15678938 - MTH918 C COG1153 - H 1 0 +G 3.2 molybdenum formylmethanofuran dehydrogenase, subunit C
836583..837893 + 1308 15678939 - MTH919 C COG1029 - H 1 0 molybdenum formylmethanofuran dehydrogenase, subunit B
837901..838974 - 1071 15678940 - MTH920 P COG1118 - H 1 0 anion permease
838952..839761 - 807 15678941 - MTH921 P COG0555 - H 2 1 anion transport system permease protein
839743..840078 - 333 15678942 - MTH922 - - - H 2 2 unknown
840146..840451 - 303 15678943 - MTH923 - - - H 1 2 unknown
840473..841255 - 780 15678944 - MTH924 P COG0725 - H 2 1 molybdate-binding periplasmic protein
841258..841968 - 708 15678945 - MTH925 S COG2014 - H 1 1 conserved protein
842001..842999 - 996 15678946 - MTH926 C COG1145 - H 1 2 +C 6.9 tungsten formylmethanofuran dehydrogenase, subunit F homolog
842989..843222 - 231 15678947 - MTH927 C COG1145 - H 2 2 +CN 6.8 3.7 ferredoxin
848719..849414 - 693 15678949 - MTH929 - - - H 0 0 unknown
867137..867523 - 384 15678970 - MTH952 S COG1417 H 1 1 conserved protein
871342..871662 - 318 15678974 - MTH956 C COG1436 H 1 2 ATP synthase, subunit F
992470..993672 - 1200 15679087 - MTH1076 - - - H 0 0 unknown
993665..993892 - 225 15679088 - MTH1077 - - - H 1 2 unknown
993870..994730 - 858 15679089 - MTH1078 S COG1332 - H 1 0 conserved protein
994731..995639 - 906 15679090 - MTH1079 S COG1567 - H 0 0 +F 3.1 unknown
995646..996383 - 735 15679091 - MTH1080 S COG1337 - H 0 0 conserved protein
996411..996833 - 420 15679092 - MTH1081 S COG1421 - H 2 1 unknown
996814..999282 - 2466 15679093 - MTH1082 R COG1353 - H 0 0 conserved protein
999658..1000662 - 1002 15679095 - MTH1084 S COG1518 - H 2 0 conserved protein
1000643..1001170 - 525 15679096 - MTH1085 L COG1468 - H 2 0 conserved protein
1001172..1003664 - 2490 15679097 - MTH1086 R COG1203 - H 2 0 conserved protein
1003655..1004464 - 807 15679098 - MTH1087 S COG1688 - H 1 0 unknown
1004466..1005641 - 1173 15679099 - MTH1088 S COG1857 - H 1 0 conserved protein
1005638..1005955 - 315 15679100 - MTH1089 - - - H 1 2 unknown
1005955..1007751 - 1794 15679101 - MTH1090 - - - H 2 0 unknown
1020208..1021914 + 1704 15679118 - MTH1107 C COG1038 + H 1 0 oxaloacetate decarboxylase, alpha subunit
1022074..1022742 - 666 15679119 - MTH1108 R COG0603 + H 0 0 conserved protein
1022739..1023995 - 1254 15679120 - MTH1109 S COG1641 + H 1 0 conserved protein
1024463..1025284 + 819 15679122 - MTH1111 I COG1267 + H 2 0 conserved protein
1025384..1026133 + 747 15679123 - MTH1112 H COG0368 + H 1 0 cobalamin (5'-phosphate) synthase
1026143..1026742 + 597 15679124 - MTH1113 S COG1303 + H 0 0 conserved protein
1026754..1027401 + 645 15679125 - MTH1114 F COG0035 + H 0 0 uracil phosphoribosyltransferase
1027594..1027998 - 402 15679126 - MTH1115 C COG1838 + H 0 2 fumarate hydratase, class I
1028020..1029111 - 1089 15679127 - MTH1116 E COG0076 + H 0 0 glutamate decarboxylase
1078820..1080043 - 1221 15679183 - MTH1172 P COG0053 - H 1 0 possible cation transporter
1080105..1081001 - 894 15679184 - MTH1173 C COG1149 - H 1 0 cell division inhibitor related protein
1081003..1081878 - 873 15679185 - MTH1174 C COG1149 - H 1 0 cell division inhibitor related protein
1081909..1082283 - 372 15679186 - MTH1175 S COG1433 - H 1 2 conserved protein
1082283..1083113 - 828 15679187 - MTH1176 D COG0489 - H 1 0 nucleotide-binding protein (putative ATPase)
1083477..1084046 - 567 15679189 - MTH1178 R COG1342 - H 1 2 +C 3.4 conserved protein
1084154..1085188 - 1032 15679190 - MTH1179 R COG1408 - H 0 0 conserved protein
1112269..1112583 + 312 15679220 - MTH1209 - - H 1 2 unknown
1130207..1130572 - 363 15679241 - MTH1230 R COG1661 H 2 2 unknown
1216794..1217207 + 411 15679350 - MTH1351 C COG1592 H 1 2 conserved protein
1222532..1222855 + 321 15679359 - MTH1360 P COG2168 H 1 1 conserved protein
1286530..1286895 + 363 15679419 - MTH1420 - - H 1 2 unknown
1325002..1325430 + 426 15679460 - MTH1463 R COG3271 H 1 2 ABC transporter related protein
1344967..1345464 - 495 15679485 - MTH1488 K COG1695 H 1 1 unknown
1360453..1360797 - 342 15679501 - MTH1504 R COG0546 H 1 1 unknown
1366909..1367226 - 315 15679506 - MTH1509 P COG1324 H 1 2 divalent cation tolerance protein
1380270..1380671 - 399 15679515 - MTH1518 - - H 1 2 unknown
1426796..1427695 + 897 15679556 - MTH1560 P COG1348 - H 1 0 nitrogenase NifH subunit
1427696..1428022 + 324 15679557 - MTH1561 E COG0347 - H 1 0 nitrogenase GlnBa subunit
1428031..1428399 + 366 15679558 - MTH1562 E COG0347 - H 0 0 nitrogenase GlnBb subunit
1428437..1429846 + 1407 15679559 - MTH1563 C COG2710 - H 1 0 nitrogenase NifD subunit
1429847..1431226 + 1377 15679560 - MTH1564 C COG2710 - H 1 0 nitrogenase molybdenum-iron protein, NifK subunit
1431195..1432631 + 1434 15679561 - MTH1565 C COG2710 - H 1 0 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
1432624..1433970 + 1344 15679562 - MTH1566 C COG2710 - H 1 0 nitrogenase molybdenum-iron protein, NifN subunit
1434206..1436206 + 1998 15679563 - MTH1567 C COG0243 - H 1 0 catalytic subunit of nitrate reductase (flp)
1502883..1503350 + 465 15679633 - MTH1638 - - H 2 2 unknown
1585997..1586434 + 435 15679725 - MTH1733 S COG1667 H 1 1 unknown
1733067..1734464 + 1395 15679883 - MTH1901 - - - H 1 0 +P 3.5 unknown
1735180..1735800 + 618 15679885 - MTH1903 R COG1100 - H 0 0 unknown
1735810..1736178 + 366 15679886 - MTH1904 S COG3365 - H 0 2 unknown
1736575..1738710 + 2133 15679888 - MTH1906 R COG1287 - H 2 0 oligosaccharyl transferase STT3 subunit related protein
1741023..1741316 + 291 15679890 - MTH1908 - - - H 1 2 +FW 3.3 4.3 unknown

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