Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Methanopyrus kandleri AV19 (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
28904..29251 - 345 20093474 - MK0034 - - H 2 2 Uncharacterized conserved protein
61097..61705 - 606 20093506 TolQ MK0066 - - H 1 1 Biopolymer transport protein
62910..63524 - 612 20093508 - MK0068 - - H 1 1 Uncharacterized protein
163354..163716 + 360 20093605 - MK0165 - - H 1 2 Uncharacterized protein conserved in archaea
170934..171410 + 474 20093615 TroR MK0175 - - H 1 1 Mn-dependent transcriptional regulator
205420..205839 - 417 20093654 - MK0214 - - H 1 2 Predicted metal-dependent protease of the PAD1/JAB1 superfamily
257387..257812 - 423 20093708 FlpD_1 MK0268 - - H 2 2 Coenzyme F420-reducing hydrogenase, delta subunit
290810..291202 + 390 20093741 - MK0301 - - H 1 2 Predicted RNA-binding protein containing PIN domain, a fragment
309026..309403 - 375 20093755 - MK0317 - - + H 1 1 Predicted DNA methylase containing a Zn-ribbon
310314..310514 - 198 20093757 - MK0319 - - + H 0 2 Predicted dehydrogenase related to phosphoglycerate dehydrogenase, a fragment
310502..311260 - 756 20093758 SerA MK0320 - - + H 0 0 Predicted dehydrogenase related to phosphoglycerate dehydrogenase
311717..313774 + 2055 20093759 - MK0321 - - + H 1 0 Selenocysteine-containing anaerobic dehydrogenase
313780..314913 + 1131 20093760 - MK0322 - - + H 1 0 +C 3.6 Coenzyme F420-reducing hydrogenase, beta subunit
315226..315678 + 450 20093761 Fwd_F2 MK0323 - - + H 1 2 +C 4.2 Probable formylmethanofuran dehydrogenase subunit F, ferredoxin containing
320696..321142 + 444 20093767 - MK0329 - - + H 1 0 Predicted membrane protein
321611..322570 - 957 20093768 - MK0330 - - + H 1 0 Uncharacterized secreted protein specific for M.kandleri, MK-30 family
324061..324486 - 423 20093770 - MK0332 - - + H 1 0 Uncharacterized protein conserved in archaea
324530..325426 + 894 20093771 ThrB MK0333 - - + H 1 0 Homoserine kinase
325541..326770 - 1227 20093772 CbiD MK0334 - - + H 0 0 Cobalamin biosynthesis protein CbiD
326767..327753 - 984 20093773 GCN3 MK0335 - - + H 0 0 Translation initiation factor eIF-2B alpha subunit
378195..379127 - 930 20093834 - MK0396 - - H 2 2 SAM-dependent methyltransferase
388923..389306 + 381 20093846 - MK0408 - - H 1 1 Uncharacterized membrane protein/domain
404095..404466 - 369 20093869 - MK0431 - - H 1 1 Uncharacterized protein conserved in archaea
404463..404834 - 369 20093870 - MK0432 - - H 1 2 Uncharacterized protein
423263..423655 - 390 20093892 - MK0454 - - - H 1 2 +I 3.0 Uncharacterized protein conserved in archaea
424099..425370 + 1269 20093894 - MK0456 - - - H 0 0 GTPase of the HflX family
425367..425804 - 435 20093895 - MK0457 - - - H 0 0 Predicted transcription regulator containing the wHTH DNA-binding domain
425875..426513 - 636 20093896 - MK0458 - - - H 0 0 CBS-domain-containing protein
426513..427271 - 756 20093897 - MK0459 - - - H 2 2 +C 6.5 Ferredoxin
427268..427711 - 441 20093898 EhaP MK0460 - - - H 1 2 +C 8.1 Ferredoxin
427686..428825 - 1137 20093899 EhbK MK0461 - - - H 1 2 +C 5.9 Ferredoxin
430599..431087 - 486 20093902 EhaN MK0464 - - - H 1 1 Ni,Fe-hydrogenase III small subunit
431084..431524 - 438 20093903 EhaM MK0465 - - - H 2 1 Uncharacterized protein conserved in archaea
431521..431865 - 342 20093904 EhaL MK0466 - - - H 0 2 +M 3.5 Uncharacterized membrane protein, conserved in archaea
440015..440614 - 597 20093918 - MK0480 - - - H 2 2 +M 3.7 Uncharacterized protein
440625..441635 + 1008 20093919 - MK0481 - - - H 1 0 +S 3.0 Predicted NTPase
441586..442755 - 1167 20093920 - MK0482 - - - H 0 0 Predicted transcriptional regulators, consists of a molybdenum cofactor biosynthesis enzyme fused to a HTH DNA-binding domain
442817..444034 - 1215 20093921 LysA MK0483 - - - H 0 0 Diaminopimelate decarboxylase
481521..482639 - 1116 20093956 - MK0518 - - - H 1 0 Uncharacterized protein conserved in archaea
483150..483854 - 702 20093957 LasT MK0519 - - - H 0 0 rRNA methylase
483880..485811 + 1929 20093958 - MK0520 - - - H 0 0 Uncharacterized ABC-type transporter, duplicated ATPase domains
485808..486257 - 447 20093959 - MK0521 - - - H 1 1 Predicted nucleotide-binding protein related to universal stress protein UspA
486337..486723 + 384 20093960 - MK0522 - - - H 2 2 +C 3.9 Zn-finger-containing protein
486677..487123 - 444 20093961 - MK0523 - - - H 0 0 Uncharacterized protein conserved in archaea
488504..489094 + 588 20093963 - MK0525 - - - H 1 0 +I 3.0 CBS-domain-containing protein
489122..489958 + 834 20093964 - MK0526 - - - H 2 1 +MT 3.6 3.2 CBS domain-containing protein
489930..492113 - 2181 20093965 - MK0527 - - - H 2 0 +W 3.8 Uncharacterized membrane protein specific for M.kandleri, MK-13 family
492151..493311 + 1158 20093966 - MK0528 - - - H 0 0 +F 3.2 ATP-dependent DNA ligase, homolog of eukaryotic ligase III
590310..591596 + 1284 20094066 AroA MK0628 - - + H 1 0 5-enolpyruvylshikimate-3-phosphate synthase
592104..592511 - 405 20094068 - MK0630 - - + H 0 2 +T 3.1 Predicted metabolic regulator containing V4R domain
592609..593769 + 1158 20094069 AroC MK0631 - - + H 0 0 Chorismate synthase
593764..594639 - 873 20094070 - MK0632 - - + H 0 0 Predicted metabolic regulator containing two V4R domains
594757..595908 + 1149 20094071 - MK0633 - - + H 0 0 Aspartate aminotransferase
595894..596667 - 771 20094072 - MK0634 - - + H 1 0 Uncharacterized protein conserved in archaea
596667..597305 + 636 20094073 SUA5 MK0635 - - + H 0 0 Translation factor (SUA5)
597298..597756 + 456 20094074 - MK0636 - - + H 1 0 Uncharacterized protein conserved in archaea
597753..598430 + 675 20094075 - MK0637 - - + H 1 0 SAM-dependent methyltransferase
598427..598936 + 507 20094076 - MK0638 - - + H 0 0 Uncharacterized conserved protein
725481..726020 - 537 20094200 - MK0763 - - H 2 2 Uncharacterized conserved protein
798324..798665 - 339 20094273 - MK0837 - - H 1 2 Uncharacterized protein
809802..810416 - 612 20094288 - MK0852 - - H 1 1 Uncharacterized protein
868674..869447 + 771 20094348 - MK0912 - - - H 1 2 Uncharacterized protein
869366..870883 + 1515 20094349 - MK0913 - - - H 1 0 Predicted membrane protein
870784..873003 - 2217 20094350 - MK0914 - - - H 2 1 +I 3.5 Predicted membrane protein, MK-44 family
872967..873524 - 555 20094351 - MK0915 - - - H 2 2 +N 4.0 Uncharacterized protein
873521..874090 - 567 20094352 - MK0916 - - - H 1 0 Predicted membrane protein
876477..876932 - 453 20094355 - MK0919 - - - H 1 2 +NW 4.7 3.5 Uncharacterized membrane protein
905879..906190 + 309 20094382 - MK0946 - - H 1 2 Uncharacterized membrane protein specific for M.kandleri, MK-4 family
910269..911270 + 999 20094385 - MK0949 - - H 2 1 Predicted membrane protein
917639..918091 - 450 20094392 - MK0956 - - H 1 1 Prefoldin, molecular chaperone implicated in de novo protein folding, alpha subunit
1072764..1073159 - 393 20094538 Fur_1 MK1102 - - H 2 2 Predicted transcriptional regulator containing a HTH DNA-binding domain
1102596..1103690 - 1092 20094564 - MK1128 - - + H 1 0 Permease of the major facilitator superfamily
1104523..1105320 + 795 20094565 - MK1129 - - + H 0 0 Predicted protease or amidase
1107532..1108419 - 885 20094567 - MK1131 - - + H 1 0 Uncharacterized protein specific for M.kandleri, MK-23 family
1109620..1110027 + 405 20094568 - MK1132 - - + H 1 0 Uncharacterized conserved protein
1113424..1114281 + 855 20094570 - MK1134 - - + H 2 0 +P 3.1 Uncharacterized protein
1114332..1115444 + 1110 20094571 - MK1135 - - + H 2 0 +AG 3.0 3.1 Permease of the major facilitator superfamily
1116295..1116663 - 366 20094573 - MK1137 - - + H 1 0 Predicted nucleotidyltransferase of the DNA polymerase beta superfamily
1116684..1116905 + 219 20094574 - MK1138 - - + H 2 2 +APR 3.1 -3.1 4.5 Uncharacterized conserved protein
1116898..1117071 + 171 20094575 - MK1139 - - + H 1 2 Uncharacterized protein
1117919..1118431 - 510 20094578 - MK1142 - - + H 1 0 Uncharacterized protein specific for M.kandleri, MK-22 family
1186783..1187529 + 744 20094628 - MK1192 - - + H 1 0 Uncharacterized conserved protein
1187747..1189015 + 1266 20094629 - MK1193 - - + H 1 0 Predicted phosphoglycerate mutase
1189569..1190054 + 483 20094631 PurE MK1195 - - + H 0 0 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
1190035..1190634 - 597 20094632 CobH MK1196 - - + H 1 0 Precorrin isomerase
1190631..1192280 - 1647 20094633 IlvD MK1197 - - + H 0 0 Dihydroxyacid dehydratase
1192330..1192938 + 606 20094634 - MK1198 - - + H 0 0 Integral membrane protein of the MarC family
1192943..1194109 + 1164 20094635 - MK1199 - - + H 0 0 Predicted GTPase of the OBG/HflX superfamily
1194106..1194801 + 693 20094636 - MK1200 - - + H 1 0 Uncharacterized, MobA-related protein
1215994..1217055 + 1059 20094666 GldA MK1230 - - + H 0 0 Glycerol dehydrogenase
1217045..1217704 - 657 20094667 SlpA MK1231 - - + H 1 0 FKBP-type peptidyl-prolyl cis-trans isomerase
1217710..1218660 - 948 20094668 SufB MK1232 - - + H 0 0 Membrane subunit of an iron-regulated ABC-type transporter
1218618..1219331 - 711 20094669 SufC MK1233 - - + H 0 0 ATPase subunit of an iron-regulated ABC-type transporter
1219555..1220589 + 1032 20094670 - MK1234 - - + H 1 0 Uncharacterized protein
1220565..1221341 - 774 20094671 - MK1235 - - + H 1 0 Predicted endonuclease of the RecB family
1221500..1222936 - 1434 20094672 - MK1236 - - + H 2 0 Acetolactate synthase large subunit homolog
1223616..1224314 - 696 20094674 - MK1238 - - + H 2 0 Uncharacterized protein
1224388..1225167 - 777 20094675 - MK1239 - - + H 1 0 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
1225182..1225970 - 786 20094676 - MK1240 - - + H 1 0 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
1225978..1226307 - 327 20094677 - MK1241 - - + H 1 1 Uncharacterized conserved protein
1227252..1227620 + 366 20094681 - MK1245 - - + H 2 0 +V 4.3 CBS-domain
1227625..1228965 + 1338 20094682 - MK1246 - - + H 1 0 Acyl-CoA synthetase (NDP forming)
1228998..1229237 + 237 20094683 FeoA MK1247 - - + H 2 2 +GV 4.3 3.4 Ferrous ion uptake system subunit
1229242..1231194 + 1950 20094684 FeoB MK1248 - - + H 1 0 Ferrous ion uptake system subunit, predicted GTPase
1231755..1232132 - 375 20094685 - MK1249 - - H 1 1 Rubrerythrin
1232451..1232984 - 531 20094686 - MK1250 - - + H 0 0 Uncharacterized membrane protein
1234371..1235411 - 1038 20094687 - MK1251 - - + H 0 0 Uncharacterized protein
1253762..1254154 + 390 20094697 Fur_2 MK1261 - - H 2 2 Fe2+/Zn2+ uptake regulator
1270586..1271590 - 1002 20094710 - MK1274 - - + H 2 0 Predicted hydrolase of the metallo-beta-lactamase superfamily
1271731..1272240 - 507 20094711 - MK1275 - - + H 0 0 Uncharacterized protein conserved in archaea
1272292..1273644 - 1350 20094712 - MK1276 - - + H 1 0 Fusion of at least two uncharacterized domain specific for M.kandleri, MK-12 family
1274035..1274772 + 735 20094713 - MK1277 - - + H 2 0 Uncharacterized protein specific for M.kandleri, MK-14 family
1275808..1277502 - 1692 20094714 - MK1278 - - + H 1 0 Uncharacterized protein specific for M.kandleri, MK-19 family
1277672..1278295 + 621 20094715 - MK1279 - - + H 2 0 +P 4.3 Uncharacterized protein
1280956..1281933 - 975 20094718 - MK1282 - - + H 2 0 Uncharacterized protein conserved in archaea
1283981..1284406 - 423 20094720 - MK1284 - - + H 1 0 Uncharacterized conserved protein
1284412..1284786 + 372 20094721 - MK1285 - - + H 1 1 Predicted nucleotidyltransferase of the DNA polymerase beta family
1287009..1287983 - 972 20094724 - MK1288 - - + H 0 0 Uncharacterized secreted protein specific for M.kandleri, MK-3 family
1288128..1290386 + 2256 20094725 - MK1289 - - + H 2 0 Predicted adenine-specific DNA methylase containing a Zn-ribbon
1292092..1292835 - 741 20094728 - MK1292 - - + H 1 0 Predicted nucleotidyltransferase of the DNA polymerase beta supefamily fused to a uncharacterized conserved domain
1292953..1294143 + 1188 20094729 - MK1293 - - + H 1 0 Uncharacterized protein conserved in archaea
1294371..1295660 + 1287 20094730 - MK1294 - - + H 1 0 Uncharacterized protein
1295771..1296877 - 1104 20094731 - MK1295 - - + H 1 0 Uncharacterized secreted protein specific for M.kandleri, MK-3 family
1298182..1300266 - 2082 20094732 - MK1296 - - + H 2 0 Predicted component of a thermophile-specific DNA repair system, contains two domains of the RAMP family
1301091..1303472 + 2379 20094733 - MK1297 - - + H 1 0 Predicted DNA-dependent DNA polymerase, component of a thermophile-specific DNA repair system
1303469..1304803 + 1332 20094734 - MK1298 - - + H 2 0 Uncharacterized protein
1304800..1305828 + 1026 20094735 - MK1299 - - + H 2 0 Predicted component of a thermophile-specific DNA repair system, contains a RAMP domain
1308020..1308490 - 468 20094736 - MK1300 - - + H 2 2 +GPT 5.2 4.2 3.5 Uncharacterized protein
1308525..1310213 - 1686 20094737 - MK1301 - - + H 1 0 Terpene cyclase/mutase family protein
1324335..1324640 - 303 20094746 - MK1310 - - + H 2 0 Uncharacterized conserved protein
1324652..1326787 - 2133 20094747 - MK1311 - - + H 1 0 Homolog of the eukaryotic argonaute protein, implicated in translation or RNA processing
1329452..1330918 - 1464 20094749 - MK1313 - - + H 0 0 +PW 3.3 3.6 Uncharacterized domain specific for M.kandleri, MK-11 family
1331274..1334015 + 2739 20094750 - MK1314 - - + H 1 0 Predicted DNA-dependent DNA polymerase, component of a thermophile-specific DNA repair system
1334554..1335609 + 1053 20094752 - MK1316 - - + H 1 0 Predicted component of a thermophile-specific DNA repair system, contains a RAMP domain
1335611..1336702 + 1089 20094753 - MK1317 - - + H 2 0 Uncharacterized protein
1336699..1338027 + 1326 20094754 - MK1318 - - + H 1 0 Uncharacterized protein
1338024..1339115 + 1089 20094755 - MK1319 - - + H 1 0 Predicted component of a thermophile-specific DNA repair system, contains a RAMP domain
1340890..1341540 - 648 20094759 - MK1323 - - + H 1 0 Metal-dependent hydrolase of the beta-lactamase superfamily
1342074..1342703 + 627 20094760 - MK1324 - - + H 1 1 +LP 3.4 3.5 Uncharacterized membrane protein specific for M.kandleri, MK-31 family
1342985..1343332 + 345 20094761 - MK1325 - - + H 1 0 Predicted regulator of Ras-like GTPase activity, member of the Roadblock/LC7/MglB family
1344045..1344728 + 681 20094762 - MK1326 - - + H 1 0 Uncharacterized domain specific for M.kandleri, MK-12 family
1344701..1345228 + 525 20094763 - MK1327 - - + H 2 0 +A 4.0 Uncharacterized domain specific for M.kandleri, MK-12 family
1345308..1345556 - 246 20094764 - MK1328 - - + H 0 2 Uncharacterized protein
1345608..1346639 - 1029 20094765 - MK1329 - - + H 1 0 Uncharacterized protein specific for M.kandleri, MK-32 family
1346857..1349094 - 2235 20094766 - MK1330 - - + H 1 0 Predicted membrane protein
1351717..1352718 + 999 20094769 - MK1333 - - + H 0 0 +L 3.2 Uncharacterized domain specific for M.kandleri, MK-2 family
1352753..1353799 - 1044 20094770 - MK1334 - - + H 2 0 Predicted membrane-bound metal-dependent hydrolase
1353804..1354355 - 549 20094771 - MK1335 - - + H 2 0 Zn-dependent hydrolase
1354689..1355963 - 1272 20094772 - MK1336 - - + H 0 0 Uncharacterized protein specific for M.kandleri, MK-42 family
1356793..1357287 - 492 20094774 - MK1338 - - + H 1 0 Uncharacterized protein
1357826..1360414 - 2586 20094775 - MK1339 - - + H 1 0 Uncharacterized protein specific for M.kandleri, contains two domains of the MK-3 family
1360653..1361492 + 837 20094776 - MK1340 - - + H 1 0 +P 3.9 Uncharacterized protein
1361489..1361719 + 228 20094777 - MK1341 - - + H 2 2 Uncharacterized protein
1365140..1366013 + 870 20094780 - MK1344 - - + H 1 0 Uncharacterized domain specific for M.kandleri, MK-34 family, a fragment
1366319..1367176 - 855 20094781 - MK1345 - - + H 2 0 Fe-S oxidoreductase
1367297..1368256 - 957 20094782 - MK1346 - - + H 0 0 Uncharacterized secreted protein specific for M.kandleri, MK-3 family
1382453..1383180 + 726 20094796 - MK1360 - - + H 0 0 +W 3.4 Uncharacterized membrane protein specific for M.kandleri, MK-10 family, a fragment
1385837..1386457 - 618 20094798 Nth_2 MK1362 - - + H 1 0 A/G-specific DNA glycosylase
1387524..1389643 + 2118 20094799 - MK1363 - - + H 0 0 Predicted membrane protein specific for M.kandleri, MK-13 family, a frameshift
1389932..1392763 + 2829 20094800 LeuS MK1364 - - + H 1 0 Leucyl-tRNA synthetase
1392767..1393741 - 972 20094801 HmdII MK1365 - - + H 0 0 N5,N10-methylenetetrahydromethanopterin dehydrogenase (H2-forming)
1393825..1395282 - 1455 20094802 CCA1 MK1366 - - + H 0 0 tRNA nucleotidyltransferase (CCA-adding enzyme)
1395443..1396009 - 564 20094803 LigT MK1367 - - + H 1 0 2'-5' RNA ligase
1397219..1398223 - 1002 20094805 SelD MK1369 - - + H 1 0 Predicted enzyme related to selenophosphate synthase
1398408..1399037 - 627 20094806 ThyA MK1370 - - + H 0 0 Thymidylate synthase
1399129..1400016 - 885 20094807 SNZ1 MK1371 - - + H 0 0 +M 3.3 Pyridoxine biosynthesis enzyme
1412760..1413503 - 741 20094822 CitT MK1386 - - + H 0 0 Di- and tricarboxylate transporter
1414907..1415602 + 693 20094824 - MK1388 - - + H 1 0 Predicted calcineurin superfamily phosphoesterase
1415734..1416798 + 1062 20094825 Asd MK1389 - - + H 0 0 Aspartate-semialdehyde dehydrogenase
1416789..1417262 - 471 20094826 - MK1390 - - + H 0 1 +G 3.7 Predicted Rossmann fold nucleotide-binding protein
1417522..1418286 + 762 20094827 TrpC MK1391 - - + H 1 0 Indole-3-glycerol phosphate synthase
1418283..1419104 + 819 20094828 - MK1392 - - + H 0 0 Uncharacterized domain specific for M.kandleri, MK-33 family
1537502..1537897 + 393 20094962 FwdD MK1526 - - H 1 1 Formylmethanofuran dehydrogenase subunit D
1596507..1597112 + 603 20095020 - MK1584 - - H 2 2 Uncharacterized protein
1659793..1660500 - 705 20095090 - MK1654 - - H 2 1 ATPase subunit of a ABC-type transport system involved in lipoprotein release
1660512..1661624 - 1110 20095091 - MK1655 - - - H 2 0 Permease subunit of a ABC-type transport system involved in lipoprotein release
1661638..1662354 - 714 20095092 - MK1656 - - - H 2 0 Archaea-specific Zn-finger-containing protein
1662382..1662804 + 420 20095093 - MK1657 - - - H 0 2 Uncharacterized protein conserved in archaea
1665945..1666487 - 540 20095099 - MK1663 - - H 2 1 Predicted sugar phosphate isomerase

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