Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Helicobacter pylori 26695 (See the Abbreviations used):


Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
34895..35248 + 351 15644667 - HP0034 H COG0853 H 1 2 aspartate 1-decarboxylase (panD)
72818..73417 - 597 15644698 - HP0068 O COG0378 H 1 2 urease accessory protein (ureG)
112828..113295 - 465 15644735 - HP0105 T COG1854 H 1 2 conserved hypothetical protein
191447..191989 + 540 15644813 - HP0184 - - H 1 1 hypothetical protein
211850..212176 - 324 15644835 - HP0206 - - H 2 2 hypothetical protein
348416..348820 + 402 15644962 - HP0334 L COG0816 H 1 2 conserved hypothetical protein
376775..377176 - 399 15644996 - HP0368 - - H 2 2 hypothetical protein
449150..449707 + 555 15645056 - HP0428 - - - H 0 0 phage/colicin/tellurite resistance cluster terY protein
449956..450123 + 165 15645058 - HP0430 - - - H 1 2 +S 3.4 hypothetical protein
450127..450813 + 684 15645059 - HP0431 T COG0631 - H 1 0 protein phosphatase 2C homolog (ptc1)
450804..451694 + 888 15645060 - HP0432 - - - H 1 0 protein kinase C-like protein
451722..452165 + 441 15645061 - HP0433 - - - H 2 0 hypothetical protein
452159..453328 + 1167 15645062 - HP0434 - - - H 2 0 hypothetical protein
453399..453974 + 573 15645063 - HP0435 L COG1112 - H 1 0 hypothetical protein
454330..454758 - 426 15645065 - HP0437 L COG1943 - H 1 0 +I 3.0 IS605 transposase (tnpA)
454828..456111 + 1281 15645066 - HP0438 L COG0675 - H 0 0 IS605 transposase (tnpB)
456080..457180 - 1098 15645067 - HP0439 N COG3736 - H 1 0 hypothetical protein
457297..459330 - 2031 15645068 - HP0440 L COG0550 - H 1 0 DNA topoisomerase I (topA)
459333..461756 - 2421 15645069 - HP0441 N COG3451 - H 2 0 VirB4 homolog
461749..462015 - 264 15645070 - HP0442 - - - H 2 2 hypothetical protein
462016..462318 - 300 15645071 - HP0443 - - - H 1 2 +IW 4.3 3.1 hypothetical protein
462315..463838 - 1521 15645072 - HP0444 - - - H 1 0 hypothetical protein
464158..464937 - 777 15645074 - HP0446 - - - H 2 0 hypothetical protein
466124..466510 + 384 15645076 - HP0448 - - H 1 1 hypothetical protein
466757..468175 + 1416 15645077 - HP0449 - - - H 2 0 hypothetical protein
470340..473405 + 3063 15645081 - HP0453 - - - H 1 0 hypothetical protein
473368..474066 + 696 15645082 - HP0454 - - - H 0 0 hypothetical protein
474313..474624 + 309 15645083 - HP0455 - - - H 2 2 hypothetical protein
475056..475508 + 450 15645084 - HP0456 - - - H 2 0 hypothetical protein
475826..476089 + 261 15645085 - HP0457 - - - H 2 2 +S 3.3 hypothetical protein
476101..476337 + 234 15645086 - HP0458 - - - H 2 2 hypothetical protein
476337..478913 + 2574 15645087 - HP0459 N COG3451 - H 2 0 virB4 homolog (virB4)
479043..479531 + 486 15645088 - HP0460 - - - H 2 0 +EQ 3.1 3.1 hypothetical protein
479557..479649 - 90 15645089 - HP0461 - - - H 2 2 +AIKQ -3.4 -3.6 4.1 3.9 hypothetical protein
480062..481159 - 1095 15645090 - HP0462 L COG0732 - H 1 0 type I restriction enzyme S protein (hsdS)
553469..554068 - 597 15645152 - HP0526 - - - H 0 0 cag pathogenicity island protein (cag6)
561625..563232 - 1605 15645155 - HP0529 - - - H 1 0 cag pathogenicity island protein (cag9)
563237..563995 - 756 15645156 - HP0530 N COG3736 - H 0 0 cag pathogenicity island protein (cag10)
564381..565037 + 654 15645157 - HP0531 - - - H 1 1 cag pathogenicity island protein (cag11)
566035..566124 - 87 15645159 - HP0533 - - - H 2 2 +ANQ -3.4 3.8 6.3 hypothetical protein
566126..566716 - 588 15645160 - HP0534 - - - H 1 2 +M 4.2 cag pathogenicity island protein (cag13)
567142..567522 - 378 15645161 - HP0535 - - - H 1 2 +M 4.9 cag pathogenicity island protein (cag14)
567955..568299 - 342 15645162 - HP0536 - - - H 2 2 +Y 3.2 cag pathogenicity island protein (cag15)
568723..569853 + 1128 15645163 - HP0537 - - - H 0 0 cag pathogenicity island protein (cag16)
569868..570788 + 918 15645164 - HP0538 - - - H 1 0 cag pathogenicity island protein (cag17)
570870..571583 - 711 15645165 - HP0539 - - - H 0 0 cag pathogenicity island protein (cag18)
572736..573848 - 1110 15645167 - HP0541 - - - H 0 0 +S 3.0 cag pathogenicity island protein (cag20)
573864..574292 - 426 15645168 - HP0542 - - - H 1 2 cag pathogenicity island protein (cag21)
574347..575153 - 804 15645169 - HP0543 - - - H 2 0 cag pathogenicity island protein (cag22)
575155..578106 - 2949 15645170 - HP0544 N COG3451 - H 0 0 cag pathogenicity island protein (cag23)
578115..578738 - 621 15645171 - HP0545 - - - H 2 0 cag pathogenicity island protein (cag24)
673909..674241 + 330 15645251 - HP0627 - - H 1 2 hypothetical protein
762219..762563 + 342 15645331 - HP0708 - - H 1 2 hypothetical protein
767374..767748 + 372 15645335 - HP0712 S COG3177 H 1 2 hypothetical protein
888773..889081 + 306 15645456 - HP0837 S COG3018 H 2 2 hypothetical protein
1048088..1048411 - 321 15645600 - HP0985 - - - H 1 2 +CF 6.3 3.3 hypothetical protein
1048714..1049427 - 711 15645601 - HP0986 - - - H 1 0 hypothetical protein
1050812..1051045 + 231 15645602 - HP0987 N COG3843 - H 1 2 +D 3.9 hypothetical protein
1051052..1051480 - 426 15645603 - HP0988 L COG1943 - H 1 0 +I 3.0 IS605 transposase (tnpA)
1051550..1052833 + 1281 15645604 - HP0989 L COG0675 - H 0 0 IS605 transposase (tnpB)
1052927..1053595 + 666 15645605 - HP0990 - - - H 1 0 hypothetical protein
1053600..1054229 - 627 15645606 - HP0991 - - - H 2 0 hypothetical protein
1054376..1054615 - 237 15645607 - HP0992 - - - H 1 2 hypothetical protein
1054815..1055066 + 249 15645608 - HP0993 - - - H 2 2 hypothetical protein
1055038..1055841 + 801 15645609 - HP0994 - - - H 2 0 +D 3.0 hypothetical protein
1056158..1057225 - 1065 15645610 - HP0995 L COG0582 - H 2 0 integrase/recombinase (xerD)
1060324..1061607 - 1281 15645612 - HP0997 L COG0675 - H 0 0 IS605 transposase (tnpB)
1061677..1062105 + 426 15645613 - HP0998 L COG1943 - H 1 0 +I 3.0 IS605 transposase (tnpA)
1063756..1064940 + 1182 15645617 - HP1002 - - - H 0 0 hypothetical protein
1064965..1066077 - 1110 15645618 - HP1003 - - - H 2 0 hypothetical protein
1066053..1066874 - 819 15645619 - HP1004 N COG3843 - H 2 0 hypothetical protein
1067156..1067470 + 312 15645620 - HP1005 - - - H 1 2 +Q 3.7 hypothetical protein
1068021..1068554 - 531 15645621 - HP1006 N COG3505 - H 1 0 conjugal transfer protein (traG)
1070508..1071068 - 558 15645623 - HP1009 L COG0582 - H 2 0 site-specific recombinase
1286969..1287484 - 513 15645824 - HP1210 E COG1045 H 2 2 serine acetyltransferase (cysE)
1334214..1334693 + 477 15645875 - HP1261 C COG0377 H 2 1 NADH-ubiquinone oxidoreductase, NQO6 subunit (NQO6)
1450188..1450637 + 447 15645998 - HP1388 - - H 2 1 hypothetical protein
1527772..1528086 - 312 15646067 - HP1458 O COG0526 H 1 2 thioredoxin
1589956..1590048 + 90 15646124 - HP1515 - - - H 2 2 +AW -3.4 3.5 hypothetical protein
1590109..1590648 - 537 15646125 - HP1516 - - - H 2 2 +F 3.7 hypothetical protein
1594490..1594777 - 285 15646127 - HP1518 L COG1002 - H 2 2 hypothetical protein
1594908..1595660 - 750 15646128 - HP1519 - - - H 2 0 hypothetical protein
1595770..1597062 - 1290 15646129 - HP1520 - - - H 2 0 hypothetical protein
1604041..1604388 + 345 15646132 - HP1524 - - - H 1 2 +N 5.5 hypothetical protein
1617981..1618484 - 501 15646147 - HP1540 C COG0723 H 1 1 ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit (fbcF)
1621612..1622022 - 408 15646149 - HP1542 S COG1664 H 1 1 hypothetical protein
1640456..1640941 - 483 15646165 - HP1558 N COG1558 H 1 1 flagellar basal-body rod protein (flgC) (proximal rod protein)

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