Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Escherichia coli K12 (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
34195..34695 + 498 16128028 caiF b0034 - - H 1 1 transcriptional regulator of cai operon
149715..150953 - 1236 16128128 yadC b0135 - - - H 2 0 +T 3.7 putative fimbrial-like protein
151003..151599 - 594 16128129 yadK b0136 - - - H 2 0 +S 3.4 putative fimbrial protein
151626..152231 - 603 16128130 yadL b0137 - - - H 1 2 +T 4.5 putative fimbrial protein
152243..152854 - 609 16128131 yadM b0138 N COG3539 - H 1 1 +T 4.1 putative fimbrial-like protein
152829..155426 - 2595 16128132 htrE b0139 N COG3188 - H 1 0 probable outer membrane porin protein involved in fimbrial assembly
155461..156201 - 738 16128133 ecpD b0140 N COG3121 - H 1 0 probable pilin chaperone similar to PapD
156299..156883 - 582 16128134 yadN b0141 N COG3539 - H 1 0 putative fimbrial-like protein
238746..239084 - 336 16128204 yafU b0218 - - H 2 1 orf, hypothetical protein
252301..252699 + 396 16128219 yafO b0233 - - H 1 1 orf, hypothetical protein
252709..253161 + 450 16128220 yafP b0234 K COG0454 H 1 1 orf, hypothetical protein
278402..278905 - 501 16128249 insB_2 b0264 L COG1662 + H 0 2 IS1 protein InsB
280053..281207 - 1152 16128252 yagA b0267 L COG1425 + H 2 0 orf, hypothetical protein
281481..282410 + 927 16128253 yagE b0268 E COG0329 + H 2 0 putative lyase/synthase
282425..284392 + 1965 16128254 yagF b0269 E COG0129 + H 2 0 putative dehydratase
286013..287623 + 1608 16128256 yagH b0271 G COG3507 + H 2 1 putative beta-xylosidase (EC 3.2.1.37)
287628..288386 - 756 16128257 yagI b0272 K COG1414 + H 2 0 putative regulator
288525..289529 - 1002 16128258 argF b0273 E COG0078 + H 1 0 ornithine carbamoyltransferase 2, chain F
289873..290376 - 501 16128259 insB_3 b0274 L COG1662 + H 0 2 IS1 protein InsB
291546..292172 - 624 16128262 yagK b0277 - - - H 0 0 +Y 3.2 orf, hypothetical protein
292444..293142 - 696 16128263 yagL b0278 - - - H 2 0 DNA-binding protein
293169..294023 - 852 16128264 yagM b0279 - - - H 2 0 orf, hypothetical protein
294363..294803 - 438 16128265 yagN b0280 - - - H 1 2 +S 4.3 orf, hypothetical protein
294920..296320 - 1398 16128266 intF b0281 L COG0582 - H 1 0 putative phage integrase
302215..302829 + 612 16128272 yagU b0287 S COG3477 H 1 1 orf, hypothetical protein
313581..314468 + 885 16128282 eaeH b0297 - - - H 0 0 attaching and effacing protein, pathogenesis factor
315674..316393 - 717 16128285 ykgA b0300 K COG2207 - H 1 0 putative ARAC-type regulatory protein
316950..317552 - 600 16128286 ykgB b0301 S COG3059 - H 0 0 orf, hypothetical protein
317526..317795 + 267 16128287 b0302 b0302 - - - H 2 2 orf, hypothetical protein
317555..317806 - 249 16128288 ykgI b0303 - - - H 2 2 +S 4.7 orf, hypothetical protein
317900..319252 - 1350 16128289 ykgC b0304 C COG1249 - H 1 0 putative oxidoreductase
323920..324588 - 666 16128295 ykgH b0310 - - H 2 1 orf, hypothetical protein
334504..335109 + 603 16128303 yahD b0318 R COG0666 H 1 1 putative transcription factor
380068..380511 - 441 16128344 b0359 b0359 R COG0110 H 1 2 putative transferase
507388..507783 + 393 16128467 ybaQ b0483 N COG3093 H 1 2 orf, hypothetical protein
557402..557977 + 573 16128514 sfmA b0530 N COG3539 H 1 1 putative fimbrial-like protein
567333..567470 + 135 16128525 b0542 b0542 - - - H 1 2 +R 3.7 orf, hypothetical protein
567538..567870 + 330 16128526 emrE b0543 P COG2076 - H 2 2 +I 3.7 methylviologen resistance
568125..569651 + 1524 16128527 ybcK b0544 L COG1961 - H 2 0 orf, hypothetical protein
570116..570667 + 549 16128528 ybcL b0545 R COG1881 - H 1 1 +T 3.3 orf, hypothetical protein
570677..571474 + 795 16128529 ybcM b0546 K COG2207 - H 2 0 putative ARAC-type regulatory protein
572144..572314 + 168 16128531 ninE b0548 - - - H 0 2 +R 4.1 similar to phage 82 and lambda proteins
574981..576108 - 1125 16128536 nmpC b0553 M COG3203 - H 1 0 outer membrane porin protein; locus of qsr prophage
576621..576836 + 213 16128537 ybcR b0554 - - - H 0 2 orf, hypothetical protein
576836..577333 + 495 16128538 ybcS b0555 R COG3772 - H 1 0 bacteriophage lambda lysozyme homolog
577823..578116 - 291 16128540 ybcU b0557 - - - H 2 2 +T 4.7 bacteriophage lambda Bor protein homolog
578407..578859 - 450 16128541 ybcV b0558 - - - H 2 0 putative an envelop protein
579103..579309 + 204 16128542 ybcW b0559 - - - H 2 2 +G -3.2 orf, hypothetical protein
581375..581806 - 429 16128545 ybcY b0562 Q COG0500 - H 2 2 orf, hypothetical protein
582904..583653 + 747 16128547 appY b0564 K COG2207 H 2 2 regulatory protein affecting appA and other genes
619419..620411 - 990 16128572 fepG b0589 P COG0609 + H 0 0 ferric enterobactin transport protein
620408..621412 - 1002 16128573 fepD b0590 P COG0609 + H 1 0 ferric enterobactin (enterochelin) transport
621523..622773 + 1248 16128574 ybdA b0591 G COG0477 + H 1 0 +L 3.3 putative transport
622777..623733 - 954 16128575 fepB b0592 P COG0614 + H 0 0 ferric enterobactin (enterochelin) binding protein; periplasmic component
624108..625283 + 1173 16128576 entC b0593 H COG1169 + H 0 0 isochorismate hydroxymutase 2, enterochelin biosynthesis
625293..626903 + 1608 16128577 entE b0594 Q COG1021 + H 0 0 2,3-dihydroxybenzoate-AMP ligase
626917..627774 + 855 16128578 entB b0595 Q COG3433 + H 0 0 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase
627774..628520 + 744 16128579 entA b0596 Q COG1028 + H 0 0 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis
628523..628936 + 411 16128580 ybdB b0597 Q COG2050 + H 0 2 orf, hypothetical protein
629117..631222 + 2103 16128581 cstA b0598 T COG1966 + H 1 0 carbon starvation protein
646707..647258 - 549 16128597 ybdU b0614 H COG3697 H 1 1 orf, hypothetical protein
695581..695916 + 333 16128646 b0663 b0663 - - H 1 2 putative RNA
714635..715129 + 492 16128665 ybfP b0689 - - H 1 2 putative pectinase
715170..715532 - 360 16128666 ybfG b0690 - - - H 1 2 +W 3.2 orf, hypothetical protein
715611..715928 - 315 16128667 ybfH b0691 - - - H 2 2 orf, hypothetical protein
715944..716141 - 195 16132270 ybfI b0691a T COG0745 - H 0 2 +R 3.2 Predicted DNA-binding protein
734873..735442 + 567 16128679 ybfC b0704 - - H 2 1 orf, hypothetical protein
820016..820729 + 711 16128755 ybhM b0787 R COG0670 H 1 1 orf, hypothetical protein
1085329..1085742 - 411 16128985 ycdP b1021 - - - H 0 2 orf, hypothetical protein
1085744..1087069 - 1323 16128986 ycdQ b1022 M COG1215 - H 1 0 orf, hypothetical protein
1087062..1089080 - 2016 16128987 ycdR b1023 G COG0726 - H 1 0 orf, hypothetical protein
1089089..1091512 - 2421 16128988 ycdS b1024 - - - H 1 0 putative outer membrane protein
1092099..1093457 + 1356 16128989 ycdT b1025 T COG2199 - H 2 0 orf, hypothetical protein
1094746..1095069 + 321 16128992 b1028 b1028 - - - H 1 0 orf, hypothetical protein
1095066..1096052 + 984 16128993 ycdU b1029 - - - H 2 0 +F 3.8 orf, hypothetical protein
1100934..1101350 - 414 16129001 csgF b1038 - - - H 1 2 +N 4.6 curli production assembly/transport component, 2nd curli operon
1101375..1101764 - 387 16129002 csgE b1039 - - - H 1 2 curli production assembly/transport component, 2nd curli operon
1101769..1102419 - 648 16129003 csgD b1040 K COG2771 - H 1 1 putative 2-component transcriptional regulator for 2nd curli operon
1103174..1103629 + 453 16129004 csgB b1041 - - - H 1 2 minor curlin subunit precursor, similar ro CsgA
1104184..1104516 + 330 16129006 csgC b1043 - - - H 1 2 +QS 3.4 4.7 putative curli production protein
1104637..1104948 + 309 16129007 b1044 b1044 - - - H 1 2 orf, hypothetical protein
1196090..1196755 - 663 16129100 ymfD b1137 Q COG0500 - H 2 2 +Y 3.6 orf, hypothetical protein
1196756..1197460 - 702 16129101 ymfE b1138 - - - H 2 2 +F 3.2 orf, hypothetical protein
1197918..1198811 + 891 16129102 lit b1139 - - - H 2 2 phage T4 late gene expression; at locus of e14 element
1198902..1200029 - 1125 16129103 intE b1140 L COG0582 - H 1 0 prophage e14 integrase
1200010..1200255 - 243 16129104 b1141 b1141 - - - H 1 2 orf, hypothetical protein
1200675..1201061 + 384 16129106 ymfI b1143 - - - H 2 2 +C 3.2 orf, hypothetical protein
1200999..1201283 - 282 16129107 ymfJ b1144 - - - H 0 2 orf, hypothetical protein
1201482..1202156 - 672 16129108 b1145 b1145 K COG1974 - H 1 1 putative phage repressor
1201944..1202447 + 501 16129109 b1146 b1146 - - - H 1 1 orf, hypothetical protein
1207355..1207768 + 411 16129118 b1155 b1155 - - - H 1 2 orf, hypothetical protein
1207740..1208342 - 600 16129119 ycfA b1156 - - - H 1 0 orf, hypothetical protein
1208342..1208881 - 537 16129120 b1157 b1157 - - - H 1 0 putative tail fiber protein
1209569..1210402 + 831 16129122 mcrA b1159 L COG1403 - H 2 0 restriction of DNA at 5-methylcytosine residues; at locus of e14 element
1210903..1211226 - 321 16129123 ycgW b1160 - - - H 2 2 +CI 3.2 5.2 orf, hypothetical protein
1211926..1212330 - 402 16129124 ycgX b1161 - - - H 2 1 orf, hypothetical protein
1212551..1213282 - 729 16129125 ycgE b1162 K COG0789 - H 0 0 putative transcriptional regulator
1213487..1214698 - 1209 16129126 b1163 b1163 T COG2200 - H 1 0 orf, hypothetical protein
1215012..1215248 + 234 16129127 ycgZ b1164 - - - H 1 2 orf, hypothetical protein
1215291..1215563 + 270 16129128 ymgA b1165 - - - H 2 2 orf, hypothetical protein
1215592..1215858 + 264 16129129 ymgB b1166 - - - H 2 2 orf, hypothetical protein
1215971..1216219 + 246 16129130 ymgC b1167 - - - H 2 2 orf, hypothetical protein
1216509..1218074 + 1563 16129131 b1168 b1168 T COG2200 - H 0 0 putative proteases
1218824..1220344 + 1518 16129132 b1169 b1169 - - - H 2 0 +NS 3.1 3.4 putative ATP-binding component of a transport system
1220429..1221445 + 1014 16129133 b1170 b1170 M COG3468 - H 0 0 putative part of putative ATP-binding component of a transport system
1221528..1221863 - 333 16129134 b1171 b1171 - - - H 0 1 +M 3.6 orf, hypothetical protein
1411261..1411500 - 237 16129307 ydaQ b1346 - - - H 0 2 orf, hypothetical protein
1411555..1411764 - 207 16129308 ydaC b1347 - - - H 2 2 +KS 5.4 3.1 orf, hypothetical protein
1411757..1411951 - 192 16129309 lar b1348 - - - H 2 2 +CGLN 6.0 3.0 -3.1 3.3 restriction alleviation and modification enhancement
1412008..1412817 - 807 16129310 recT b1349 L COG3723 - H 1 0 recombinase, DNA renaturation
1415512..1415787 - 273 16129312 racC b1351 - - - H 2 2 +K 3.6 defective prophage rac; contains recE and oriJ
1415862..1416032 - 168 16132243 ydaE b1351a - - - H 2 2 +CHKM 5.4 3.8 5.5 3.6 Uncharacterized conserved protein
1416032..1416265 - 231 16129313 ydaD b1352 - - - H 2 2 orf, hypothetical protein
1416572..1417183 + 609 16129314 sieB b1353 - - - H 2 0 phage superinfection exclusion protein
1417789..1418265 - 474 16129317 ydaR b1356 - - H 1 2 orf, hypothetical protein
1431108..1431698 - 588 16129335 b1374 b1374 L COG1961 H 1 2 putative transposon resolvase
1518229..1518951 + 720 16129409 b1450 b1450 K COG1802 H 1 1 orf, hypothetical protein
1524964..1525176 + 210 16129414 b1455 b1455 - - - H 2 2 +IM 3.3 4.8 orf, hypothetical protein
1527946..1528428 + 480 16129416 ydcD b1457 - - - H 2 2 +ANY -3.1 4.4 3.9 orf, hypothetical protein
1528610..1529356 + 744 16129417 b1458 b1458 - - - H 2 0 orf, hypothetical protein
1529400..1529600 + 198 16129418 b1459 b1459 - - - H 2 2 +T -3.2 orf, hypothetical protein
1529840..1530976 + 1134 16129419 ydcC b1460 - - - H 1 0 putative receptor
1531076..1531309 + 231 16129420 ydcE b1461 R COG1942 - H 1 2 +I 4.0 orf, hypothetical protein
1531306..1531923 - 615 16129421 b1462 b1462 R COG1853 - H 0 0 orf, hypothetical protein
1570431..1573226 - 2793 16129453 pqqL b1494 R COG0612 - H 0 0 putative peptidase
1573271..1575643 - 2370 16129454 yddB b1495 - - - H 1 0 orf, hypothetical protein
1575681..1577366 - 1683 16129455 yddA b1496 I COG1133 - H 1 0 putative ATP-binding component of a transport system
1577657..1578829 - 1170 16129456 b1497 b1497 R COG0641 - H 2 0 putative enzyme
1578866..1580581 - 1713 16129457 b1498 b1498 P COG3119 - H 1 0 putative sulfatase
1580950..1581711 - 759 16129458 b1499 b1499 K COG2207 - H 2 0 putative ARAC-type regulatory protein
1581786..1581983 - 195 16129459 b1500 b1500 - - - H 2 2 +I 4.5 orf, hypothetical protein
1584844..1585758 - 912 16129461 b1502 b1502 - - - H 1 0 putative adhesin; similar to FimH protein
1585817..1586320 - 501 16129462 b1503 b1503 N COG3539 - H 1 1 +T 4.3 putative fimbrial-like protein
1586333..1586863 - 528 16129463 b1504 b1504 N COG3539 - H 1 0 putative fimbrial-like protein
1586877..1588025 - 1146 16129464 b1505 b1505 N COG3188 - H 1 0 +N 3.3 putative outer membrane protein
1588381..1588560 - 177 16129465 b1506 b1506 K COG2207 - H 0 2 +Y 4.1 orf, hypothetical protein
1588878..1590200 - 1320 16129466 hipA b1507 R COG3550 - H 0 0 persistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator
1631646..1632236 + 588 16129504 b1545 b1545 L COG1961 H 1 2 orf, hypothetical protein
1635056..1635481 + 423 16129508 ydfO b1549 - - H 2 2 orf, hypothetical protein
1637548..1638081 - 531 16129513 b1554 b1554 R COG3772 - H 0 0 +C 3.0 putative lysozyme
1638078..1638389 - 309 16129514 b1555 b1555 - - H 1 2 orf, hypothetical protein
1638394..1638684 - 288 16129515 b1556 b1556 - - - H 1 2 orf, hypothetical protein
1639363..1639578 - 213 16129516 cspB b1557 K COG1278 - H 2 2 +F 3.5 cold shock protein; may affect transcription
1639879..1640091 + 210 16129517 cspF b1558 K COG1278 - H 1 2 cold shock protein
1640513..1641295 - 780 16129518 b1559 b1559 - - - H 0 2 orf, hypothetical protein
1642675..1642926 - 249 16129520 rem b1561 - - - H 2 2 orf, hypothetical protein
1643921..1644226 + 303 16129524 b1565 b1565 - - - H 1 2 +S 3.8 orf, hypothetical protein
1644429..1644761 + 330 16129525 flxA b1566 - - - H 1 2 +KQT 3.0 3.4 3.3 orf, hypothetical protein
1645198..1645347 - 147 16129526 b1567 b1567 - - - H 1 2 +DGKP 3.8 -3.2 7.5 6.4 orf, hypothetical protein
1645370..1645660 - 288 16129527 b1568 b1568 - - - H 0 2 +S -3.2 orf, hypothetical protein
1645644..1645874 - 228 16129528 dicC b1569 - - - H 1 2 regulator of dicB
1645958..1646365 + 405 16129529 dicA b1570 K COG1396 - H 1 2 regulator of dicB
1646647..1646817 + 168 16129531 ydfB b1572 - - - H 0 2 +ES 4.4 3.6 orf, hypothetical protein
1647633..1647821 + 186 16129533 dicB b1575 - - - H 2 2 +C 3.3 inhibition of cell division
1647818..1648009 + 189 16129534 ydfD b1576 - - - H 1 2 +V 3.5 orf, hypothetical protein
1649536..1650732 + 1194 16129537 b1579 b1579 L COG0582 - H 1 0 putative transposase
1650920..1651939 - 1017 16129538 rspB b1580 E COG1063 - H 1 0 starvation sensing protein
1671160..1671525 - 363 16129558 b1600 b1600 P COG2076 H 1 2 possible chaperone
1819323..1819643 - 318 16129692 celA b1738 G COG1440 H 1 2 PEP-dependent phosphotransferase enzyme IV for cellobiose, arbutin, and salicin
1959975..1960484 + 507 16129829 yecT b1877 S COG3755 H 2 1 orf, hypothetical protein
2009571..2009891 - 318 16129881 yedN b1934 - - H 2 2 orf, hypothetical protein
2021990..2022613 + 621 16129898 rcsA b1951 K COG2771 H 2 1 positive regulator for ctr capsule biosynthesis, positive transcription factor
2031141..2031524 - 381 16129909 b1963 b1963 - - - H 1 2 orf, hypothetical protein
2032043..2032558 + 513 16129910 b1964 b1964 M COG3203 - H 1 0 +G 3.5 putative outer membrane protein
2032568..2032777 + 207 16129911 b1965 b1965 M COG3203 - H 1 2 +GS 5.2 3.1 orf, hypothetical protein
2032861..2033265 + 402 16129912 b1966 b1966 M COG3203 - H 0 2 +Y 5.0 putative outer membrane protein
2033857..2034708 + 849 16129913 yedU b1967 R COG0693 - H 0 0 orf, hypothetical protein
2034816..2036174 - 1356 16129914 yedV b1968 T COG0642 - H 2 0 putative 2-component sensor protein
2036174..2036893 - 717 16129915 yedW b1969 T COG0745 - H 1 2 putative 2-component transcriptional regulator
2036978..2037391 + 411 16129916 b1970 b1970 R COG2351 - H 1 2 orf, hypothetical protein
2038505..2039140 + 633 16129918 b1972 b1972 S COG2717 - H 0 2 +L 4.3 orf, hypothetical protein
2039397..2040047 + 648 16129919 b1973 b1973 R COG3443 - H 2 0 orf, hypothetical protein
2040360..2040920 + 558 16129920 yodB b1974 C COG3038 - H 1 2 putative cytochrome
2042885..2050036 + 7149 16129922 b1978 b1978 - - - H 0 0 +T 3.6 putative factor
2050298..2050624 - 324 16129923 b1979 b1979 M COG0859 - H 2 2 orf, hypothetical protein
2050646..2051350 - 702 16129924 b1980 b1980 M COG0859 - H 2 0 orf, hypothetical protein
2051665..2052981 + 1314 16129925 shiA b1981 G COG0477 - H 0 0 putative transport protein, shikimate
2074330..2074776 + 444 16129943 yeeS b2002 L COG2003 H 1 2 putative DNA repair protein, RADC family
2099418..2101411 - 792 16132246 yefJ b2029a R COG1216 - H 2 0 +Y 3.2 Predicted glycosyltransferase
2101413..2102531 - 1116 16129972 wbbK b2032 M COG0438 - H 2 0 +K 3.2 putative glucose transferase
2102516..2103106 - 588 16129973 wbbJ b2033 R COG0110 - H 2 0 putative O-acetyl transferase
2103087..2104079 - 990 16129974 wbbI b2034 - - - H 2 0 putative Galf transferase
2104082..2105248 - 1164 16129975 wbbH b2035 - - - H 2 0 +FY 3.3 3.0 O-antigen polymerase
2105248..2106351 - 1101 16129976 glf b2036 M COG0562 - H 2 0 +Y 3.3 UDP-galactopyranose mutase
2106359..2107606 - 1245 16129977 rfbX b2037 R COG2244 - H 2 0 +I 3.1 putative O-antigen transporter
2107603..2108160 - 555 16129978 rfbC b2038 M COG1898 - H 2 2 dTDP-6-deoxy-D-glucose-3,5 epimerase
2108160..2109041 - 879 16129979 rfbA b2039 M COG1209 - H 1 0 glucose-1-phosphate thymidylyltransferase
2109998..2111083 - 1083 16129981 rfbB b2041 M COG1088 - H 1 0 dTDP-glucose 4,6 dehydratase
2166011..2166388 - 375 16130025 b2085 b2085 - - H 2 2 orf, hypothetical protein
2184800..2185318 + 516 16130045 b2107 b2107 - - - H 1 0 orf, hypothetical protein
2185400..2186434 - 1032 16130046 yehA b2108 - - - H 2 2 +NS 3.2 3.3 putative type-1 fimbrial protein
2186450..2188930 - 2478 16130047 yehB b2109 N COG3188 - H 0 0 putative outer membrane protein
2188946..2189665 - 717 16130048 yehC b2110 N COG3121 - H 2 1 +N 3.9 putative chaperone
2189700..2190242 - 540 16130049 yehD b2111 N COG3539 - H 2 1 +S 3.5 putative fimbrial-like protein
2190535..2190816 - 279 16130050 yehE b2112 - - - H 1 2 orf, hypothetical protein
2194494..2195318 + 822 16130053 molR_1 b2115 S COG3831 - H 0 0 molybdate metabolism regulator, first fragment
2380733..2381944 + 1209 16130204 elaD b2269 - - - H 2 0 +N 3.2 putative sulfatase / phosphatase
2382015..2383742 - 1725 16130205 yfbK b2270 R COG2304 - H 0 0 orf, hypothetical protein
2383874..2384851 + 975 16130206 yfbL b2271 R COG2234 - H 0 0 putative aminopeptidase
2384954..2385457 + 501 16130207 yfbM b2272 - - - H 0 2 orf, hypothetical protein
2385730..2386446 - 714 16130208 yfbN b2273 - - - H 2 0 orf, hypothetical protein
2386601..2387077 + 474 16130209 b2274 b2274 - - - H 2 2 orf, hypothetical protein
2387133..2387984 + 849 16130210 b2275 b2275 - - - H 1 0 orf, hypothetical protein
2447248..2448084 - 834 16130267 b2332 b2332 - - H 1 1 orf, hypothetical protein
2464565..2465722 + 1155 16130281 intC b2349 L COG0582 - H 0 0 putative prophage Sf6-like integrase
2465875..2466237 + 360 16130282 b2350 b2350 S COG2246 - H 1 2 +F 4.5 orf, hypothetical protein
2466234..2467154 + 918 16130283 b2351 b2351 M COG0463 - H 2 0 putative glycan biosynthesis enzyme
2467151..2468482 + 1329 16130284 b2352 b2352 - - - H 2 2 +FY 3.5 3.9 putative ligase
2469097..2469537 - 438 16130286 b2354 b2354 - - - H 1 2 orf, hypothetical protein
2469564..2470082 - 516 16130287 yfdL b2355 - - - H 0 0 putative RNA polymerase beta
2474714..2475649 - 933 16130296 dsdC b2364 K COG0583 - H 0 0 D-serine dehydratase (deaminase) transcriptional activator
2475867..2477204 + 1335 16130297 dsdX b2365 G COG2610 - H 0 0 transport system permease (serine?)
2478658..2480196 - 1536 16130299 emrY b2367 G COG0477 - H 1 0 multidrug resistance protein Y
2480196..2481359 - 1161 16130300 emrK b2368 Q COG1566 - H 1 0 multidrug resistance protein K
2481775..2482389 + 612 16130301 evgA b2369 T COG2197 - H 2 0 putative positive transcription regulator (sensor EvgS)
2482394..2485987 + 3591 16130302 evgS b2370 T COG0784 - H 2 0 putative sensor for regulator EvgA
2486043..2487227 - 1182 16130303 yfdE b2371 C COG1804 - H 1 0 putative enzyme
2487262..2488206 - 942 16130304 b2372 b2372 R COG0679 - H 1 0 putative receptor protein
2488276..2489970 - 1692 16130305 b2373 b2373 E COG0028 - H 1 0 putative enzyme
2490024..2491274 - 1248 16130306 b2374 b2374 C COG1804 - H 1 0 putative enzyme
2492718..2492993 + 273 16130308 b2376 b2376 - - - H 2 2 orf, hypothetical protein
2561597..2561989 + 390 16130373 b2448 b2448 - - H 1 2 orf, hypothetical protein
2562000..2562392 + 390 16130374 b2449 b2449 - - H 1 2 orf, hypothetical protein
2566344..2567558 - 1212 16130378 eutG b2453 C COG1454 + H 1 0 ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase
2567521..2568357 - 834 16130379 eutJ b2454 - - + H 1 0 ethanolamine utilization; homolog of Salmonella gene
2568368..2569771 - 1401 16130380 eutE b2455 C COG1012 + H 0 0 ethanolamine utilization; similar to acetaldehyde dehydrogenase
2569783..2570070 - 285 16130381 cchB b2456 - - + H 0 2 +V 3.7 detox protein
2570177..2570512 - 333 16130382 cchA b2457 - - + H 1 1 detox protein
2570509..2571525 - 1014 16130383 eutI b2458 C COG0280 + H 1 0 ethanolamine utilization; homolog of Salmonella acetyl/butyryl P transferase
2571522..2572325 - 801 16130384 b2459 b2459 - - + H 1 0 orf, hypothetical protein
2572322..2573023 - 699 16130385 b2460 b2460 - - + H 0 0 orf, hypothetical protein
2739341..2739745 + 402 16130523 yfiL b2602 - - H 1 2 orf, hypothetical protein
2752309..2752785 - 474 16130538 b2619 b2619 I COG2867 H 1 1 orf, hypothetical protein
2754180..2755421 + 1239 16130540 intA b2622 L COG0582 - H 0 0 prophage CP4-57 integrase
2755665..2756621 - 954 16130541 yfjH b2623 - - - H 2 0 putative histone
2756665..2756877 + 210 16130542 alpA b2624 K COG3311 - H 1 2 prophage CP4-57 regulatory protein alpA
2757006..2758415 + 1407 16130543 yfjI b2625 - - - H 2 0 orf, hypothetical protein
2758568..2759194 + 624 16130544 yfjJ b2626 - - - H 2 1 orf, hypothetical protein
2763534..2763797 - 261 16130547 yfjM b2629 - - - H 1 2 orf, hypothetical protein
2763939..2765012 + 1071 16130548 yfjN b2630 - - - H 0 0 putative cell division protein
2765056..2765376 + 318 16130549 yfjO b2631 - - - H 0 2 orf, hypothetical protein
2771339..2773042 + 1701 16130557 yfjW b2642 - - H 2 1 orf, hypothetical protein
2775474..2775803 + 327 16130561 ypjF b2646 - - - H 0 2 orf, hypothetical protein
2776167..2780876 - 4707 16130562 ypjA b2647 - - - H 0 0 +NT 3.1 3.2 putative ATP-binding component of a transport system
2781085..2781228 - 141 16130563 b2648 b2648 - - - H 0 2 +C 6.7 orf, hypothetical protein
2781658..2782449 - 789 16130564 b2649 b2649 - - - H 2 1 +S 3.2 orf, hypothetical protein
2782549..2783031 - 480 16130565 b2650 b2650 - - - H 2 2 +N 4.8 orf, hypothetical protein
2783241..2783372 + 129 16130566 b2651 b2651 - - - H 1 2 +GV -3.2 6.8 orf, hypothetical protein
2783820..2783993 - 171 16130567 b2653 b2653 - - - H 1 2 +ILMS 4.7 -3.0 3.5 3.5 orf, hypothetical protein
2784417..2784749 + 330 16130568 b2654 b2654 - - - H 2 2 +N 3.7 orf, hypothetical protein
2784768..2785262 + 492 16130569 b2655 b2655 - - - H 2 2 orf, hypothetical protein
2785267..2785455 + 186 16130570 b2656 b2656 G COG0366 - H 2 2 +DGI 5.0 3.2 4.1 orf, hypothetical protein
2785627..2786259 + 630 16130571 b2657 b2657 G COG0366 - H 2 0 putative enzyme
2786398..2786670 + 270 16130572 b2658 b2658 - - - H 2 2 +AN -3.1 6.3 orf, hypothetical protein
2795541..2796065 + 522 16130582 ygaP b2668 P COG0607 H 1 1 orf, hypothetical protein
2841466..2842233 - 765 16130626 hycG b2719 C COG3260 + H 0 0 hydrogenase activity
2842785..2844494 - 1707 16130628 hycE b2721 C COG3261 + H 1 0 large subunit of hydrogenase 3 (part of FHL complex)
2844512..2845435 - 921 16130629 hycD b2722 C COG0650 + H 1 0 membrane-spanning protein of hydrogenase 3 (part of FHL complex)
2845438..2847264 - 1824 16130630 hycC b2723 C COG0651 + H 0 0 membrane-spanning protein of hydrogenase 3 (part of FHL complex)
2847261..2847872 - 609 16130631 hycB b2724 C COG1142 + H 0 0 +C 6.1 probable small subunit of hydrogenase-3, iron-sulfur protein (part of formate hydrogenlyase (FHL) complex)
2877811..2878410 - 597 16130663 b2756 b2756 - - - H 1 0 orf, hypothetical protein
2878397..2879077 - 678 16130664 b2757 b2757 S COG1688 - H 1 0 orf, hypothetical protein
2879074..2880165 - 1089 16130665 b2758 b2758 - - - H 1 0 orf, hypothetical protein
2880178..2880660 - 480 16130666 ygcK b2759 - - - H 1 2 orf, hypothetical protein
2880653..2882161 - 1506 16130667 b2760 b2760 - - - H 1 0 orf, hypothetical protein
2882576..2885242 - 2664 16130668 ygcB b2761 R COG1203 - H 1 0 orf, hypothetical protein
2908778..2909113 - 333 16130689 chpA b2782 T COG2337 H 1 2 probable growth inhibitor, PemK-like, autoregulated
2983869..2985098 + 1227 16130749 b2845 b2845 E COG0814 - H 1 0 putative transporter protein
2985498..2986190 + 690 16130750 yqeH b2846 T COG2197 - H 2 0 orf, hypothetical protein
2986524..2987333 + 807 16130751 yqeI b2847 K COG3710 - H 2 0 +N 3.5 putative sensory transducer
2987314..2987808 + 492 16130752 yqeJ b2848 - - - H 2 0 orf, hypothetical protein
2987957..2988394 - 435 16130753 yqeK b2849 - - - H 2 2 +AGNS -3.0 -3.2 4.7 4.0 orf, hypothetical protein
2988576..2989022 + 444 16130754 ygeF b2850 - - - H 2 2 +N 4.1 orf, hypothetical protein
2989290..2989781 + 489 16130755 ygeG b2851 R COG0457 - H 2 2 +Y 5.6 orf, hypothetical protein
2990116..2991492 + 1374 16130756 ygeH b2852 T COG0745 - H 2 0 putative invasion protein
2991660..2991878 + 216 16130757 b2853 b2853 - - - H 2 2 +N 4.3 orf, hypothetical protein
2992021..2992437 + 414 16130758 b2854 b2854 M COG0741 - H 2 2 +N 4.2 orf, hypothetical protein
2992482..2992928 - 444 16130759 ygeK b2855 K COG2771 - H 2 2 putative 2-component transcriptional regulator
2992959..2993114 - 153 16130760 b2856 b2856 - - - H 2 2 +K 3.4 orf, hypothetical protein
2993336..2993767 - 429 16130761 b2857 b2857 - - - H 2 2 +F 3.0 orf, hypothetical protein
2993770..2994042 - 270 16132249 ygeN b2858m - - - H 2 2 +EIK 3.2 4.0 5.2 Uncharacterized protein
2993984..2994409 - 423 16130762 b2859 b2859 - - - H 2 2 orf, hypothetical protein
2995711..2996010 - 297 16130765 b2862 b2862 - - - H 2 2 orf, hypothetical protein
2996056..2996892 - 834 16130766 b2863 b2863 - - - H 1 0 orf, hypothetical protein
2997158..2997937 - 777 16130767 b2865 b2865 M COG0739 - H 1 0 putative lipoprotein
3076906..3077349 - 441 16130835 cmtB b2934 G COG1762 H 1 2 PTS system, mannitol-specific enzyme II component, cryptic
3183430..3183981 + 549 16130939 ygiL b3043 N COG3539 H 1 1 putative fimbrial-like protein
3185416..3187881 + 2463 16130942 yqiG b3046 N COG3188 - H 1 0 putative membrane protein
3187888..3188646 + 756 16130943 yqiH b3047 N COG3121 - H 2 0 putative membrane protein
3188648..3189712 + 1062 16130944 yqiI b3048 - - - H 2 0 orf, hypothetical protein
3189755..3189955 - 198 16130945 glgS b3049 - - - H 0 2 +M 4.0 glycogen biosynthesis, rpoS dependent
3190224..3190853 + 627 16130946 b3050 b3050 - - - H 1 0 putative oxidoreductase
3358811..3359575 + 762 16131104 gltF b3214 - - - H 1 0 +T 4.0 regulator of gltBDF operon, induction of Ntr enzymes
3359747..3360421 + 672 16131105 yhcA b3215 N COG3121 - H 1 0 +T 3.9 putative chaperone
3360442..3362823 + 2379 16131106 yhcD b3216 N COG3188 - H 1 0 putative outer membrane protein
3362820..3363299 + 477 16131107 yhcE b3217 - - - H 1 2 +N 4.1 orf, hypothetical protein
3364561..3365277 + 714 16131109 yhcF b3219 - - - H 1 0 +T 3.0 putative transcriptional regulator
3494188..3494514 + 324 16131245 nirD b3366 P COG2146 H 1 2 nitrite reductase (NAD(P)H) subunit
3611298..3612872 + 1572 16131348 nikA b3476 E COG0747 + H 0 0 periplasmic binding protein for nickel
3612872..3613816 + 942 16131349 nikB b3477 E COG0601 + H 1 0 transport of nickel, membrane protein
3613813..3614646 + 831 16131350 nikC b3478 E COG1173 + H 1 0 transport of nickel, membrane protein
3614646..3615410 + 762 16131351 nikD b3479 E COG0444 + H 1 0 ATP-binding protein of nickel transport system
3615407..3616213 + 804 16131352 nikE b3480 E COG1124 + H 0 0 ATP-binding protein of nickel transport system
3616219..3616620 + 399 16131353 yhhG b3481 K COG0864 + H 1 2 +H 5.3 orf, hypothetical protein
3616823..3621058 + 4233 16131354 rhsB b3482 M COG3209 + H 1 0 rhsB protein in rhs element
3621045..3621413 + 366 16131355 yhhH b3483 - - H 2 2 orf, hypothetical protein
3648921..3649703 + 780 16131376 yhiS b3504 - - - H 2 2 +N 3.4 orf, hypothetical protein
3651558..3652157 + 597 16131378 slp b3506 M COG3065 - H 0 0 outer membrane protein induced after carbon starvation
3652313..3652843 + 528 16131379 yhiF b3507 - - - H 2 0 +I 3.1 orf, hypothetical protein
3652885..3653532 - 645 16131380 yhiD b3508 S COG1285 - H 0 0 putative transport ATPase
3653596..3653934 - 336 16131381 hdeB b3509 - - - H 2 2 +N 3.0 orf, hypothetical protein
3654625..3655197 + 570 16131383 hdeD b3511 S COG3247 - H 1 1 +F 3.2 orf, hypothetical protein
3655996..3656523 + 525 16131384 yhiE b3512 - - - H 2 1 +IK 3.1 4.1 orf, hypothetical protein
3662616..3663440 - 822 16131388 yhiX b3516 K COG2207 H 2 2 putative ARAC-type regulatory protein
3718827..3719678 + 849 16131429 t150 b3558 L COG2801 H 1 2 IS150 putative transposase
3724553..3724993 - 438 16131433 yiaA b3562 - - H 2 1 orf, hypothetical protein
3725036..3725389 - 351 16131434 yiaB b3563 - - H 2 2 orf, hypothetical protein
3741957..3742430 + 471 16131448 yiaM b3577 S COG3090 H 1 1 orf, hypothetical protein
3763964..3764806 + 840 16131465 yibA b3594 C COG1413 H 2 1 orf, hypothetical protein
3794575..3795834 + 1257 16131493 rfaL b3622 M COG3307 - H 2 2 +I 3.5 O-antigen ligase; lipopolysaccharide core biosynthesis
3795866..3796939 - 1071 16131494 rfaK b3623 M COG0859 - H 2 0 probably hexose transferase; lipopolysaccharide core biosynthesis
3796972..3797823 - 849 16131495 rfaZ b3624 - - - H 2 0 lipopolysaccharide core biosynthesis
3797894..3798592 - 696 16131496 rfaY b3625 T COG0515 - H 2 0 lipopolysaccharide core biosynthesis
3798610..3799626 - 1014 16131497 rfaJ b3626 M COG1442 - H 2 0 UDP-D-glucose:(galactosyl)lipopolysaccharide glucosyltransferase
3799666..3800685 - 1017 16131498 rfaI b3627 M COG1442 - H 2 0 UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase
3800685..3801794 - 1107 16131499 rfaB b3628 M COG0438 - H 2 0 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6- D-galactosyltransferase
3801808..3802743 - 933 16131500 rfaS b3629 - - - H 2 2 +IKN 3.7 3.2 3.2 lipopolysaccharide core biosynthesis
3802780..3803577 - 795 16131501 rfaP b3630 - - - H 1 0 lipopolysaccharide core biosynthesis; phosphorylation of core heptose; attaches phosphate-containing substrate to LPS co
3803570..3804694 - 1122 16131502 rfaG b3631 M COG0438 - H 1 0 glucosyltransferase I; lipopolysaccharide core biosynthesis
3804691..3805725 - 1032 16131503 rfaQ b3632 M COG0859 - H 1 0 lipopolysaccharide core biosynthesis
4000031..4000411 - 378 16131667 yigF b3817 - - H 2 2 orf, hypothetical protein
4311922..4312680 - 756 16131918 phnP b4092 R COG1235 + H 1 0 phosphonate metabolism
4312682..4313116 - 432 16131919 phnO b4093 K COG0454 + H 1 1 +H 3.6 putative regulator, phn operon
4313103..4313660 - 555 16131920 phnN b4094 P COG3709 + H 1 0 ATP-binding component of phosphonate transport
4313660..4314796 - 1134 16131921 phnM b4095 P COG3454 + H 2 0 phosphonate metabolism
4314793..4315473 - 678 16131922 phnL b4096 R COG1136 + H 1 0 ATP-binding component of phosphonate transport
4315584..4316342 - 756 16131923 phnK b4097 E COG1101 + H 2 0 ATP-binding component of phosphonate transport
4316339..4317184 - 843 16131924 phnJ b4098 P COG3627 + H 1 0 phosphonate metabolism
4317177..4318241 - 1062 16131925 phnI b4099 P COG3626 + H 2 0 phosphonate metabolism
4318241..4318825 - 582 16131926 phnH b4100 P COG3625 + H 1 0 phosphonate metabolism
4318822..4319274 - 450 16131927 phnG b4101 P COG3624 + H 2 1 phosphonate metabolism
4319275..4320000 - 723 16131928 phnF b4102 K COG2188 + H 2 0 putative transcriptional regulator
4407711..4408112 + 399 16132003 yjfI b4181 S COG3789 H 2 2 orf, hypothetical protein
4435285..4435785 + 498 16132037 ytfI b4215 - - H 2 2 orf, hypothetical protein
4497167..4497502 + 333 16132095 yjgW b4274 - - - H 1 2 +T 3.2 orf, hypothetical protein
4497611..4498057 - 444 16132096 yjgX b4275 R COG2194 - H 1 2 +S 3.8 orf, hypothetical protein
4498000..4498449 - 447 16132097 yjgY b4276 - - - H 0 2 orf, hypothetical protein
4501566..4502843 + 1275 16132100 yjhB b4279 G COG0477 - H 2 0 putative transport protein
4502840..4503973 + 1131 16132101 yjhC b4280 R COG0673 - H 2 0 putative dehydrogenase
4504474..4504677 + 201 16132103 yjhE b4282 - - - H 1 2 +I 4.3 orf, hypothetical protein
4504729..4505031 + 300 16132104 yi91b b4283 L COG2963 - H 1 2 +K 3.5 IS911 hypothetical protein (IS911B)
4505034..4506185 - 1149 16132105 tra8_3 b4284 L COG2826 - H 1 2 +R 3.2 IS30 transposase
4508258..4509025 - 765 16132108 fecE b4287 P COG1120 + H 0 0 ATP-binding component of citrate-dependent iron(III) transport protein
4509026..4509982 - 954 16132109 fecD b4288 P COG0609 + H 1 0 +L 3.5 citrate-dependent iron transport, membrane-bound protein
4509979..4510977 - 996 16132110 fecC b4289 P COG0609 + H 1 0 +L 3.2 citrate-dependent iron(III) transport protein, cytosolic
4510974..4511882 - 906 16132111 fecB b4290 P COG0614 + H 0 0 citrate-dependent iron transport, periplasmic protein
4511921..4514245 - 2322 16132112 fecA b4291 P COG1629 + H 1 0 outer membrane receptor; citrate-dependent iron transport, outer membrane receptor
4514332..4515285 - 951 16132113 fecR b4292 P COG3712 + H 1 0 regulator for fec operon, periplasmic
4598547..4599086 - 537 16132183 dnaT b4362 - - H 1 1 DNA biosynthesis; primosomal protein i

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