Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Deinococcus radiodurans chromosome 1 (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
21162..21761 - 597 15805063 DR0022 DR0022 - - H 1 2 conserved hypothetical protein
94950..95495 + 543 15805135 DR0094 DR0094 - - H 2 1 hypothetical protein
100371..100802 + 429 15805140 DR0099 DR0099 L COG0629 H 1 2 single-stranded DNA-binding protein
139302..139778 + 474 15805179 DR0140 DR0140 - - - H 2 2 +NS 4.7 3.9 hypothetical protein
141046..142839 + 1791 15805180 DR0143 DR0143 - - - H 1 1 +ST 3.1 4.9 hypothetical protein
142588..143571 - 981 15805181 DR0144 DR0144 - - - H 2 0 transposase, putative
143750..145225 + 1473 15805182 DR0145 DR0145 - - - H 1 1 +ST 4.4 4.4 hypothetical protein
146367..146879 - 510 15805184 DR0147 DR0147 - - - H 2 2 hypothetical protein
178048..178443 + 393 15805213 DR0177 DR0177 L COG1943 H 2 2 transposase, putative
222050..222553 + 501 15805257 DR0221 DR0221 S COG2852 H 2 2 conserved hypothetical protein
238652..238990 - 336 15805277 DR0242 DR0242 S COG3502 H 1 1 conserved hypothetical protein
247495..247959 + 462 15807622 - DR0251 R COG1079 H 1 1 conserved hypothetical protein
252983..253501 - 516 15807623 - DR0255 L COG3335 H 2 2 putative transposase
310391..310834 + 441 15805337 DR0308 DR0308 - - H 1 1 hypothetical protein
325994..326356 - 360 15805360 DR0331 DR0331 - - H 1 2 hypothetical protein
509003..509479 - 474 15805533 DR0506 DR0506 - - H 2 2 hypothetical protein
522751..523011 + 258 15805545 DR0518 DR0518 - - + H 2 2 hypothetical protein
523008..523247 + 237 15805546 DR0519 DR0519 - - + H 0 2 hypothetical protein
524080..524475 + 393 15805548 DR0521 DR0521 - - + H 2 1 hypothetical protein
524472..524975 + 501 15805549 DR0522 DR0522 - - + H 1 0 hypothetical protein
524968..525552 + 582 15805550 DR0523 DR0523 - - + H 1 1 +A 3.3 hypothetical protein
533860..534480 - 618 15805558 DR0531 DR0531 - - H 1 2 hypothetical protein
536164..538266 - 2100 15805561 DR0534 DR0534 T COG0515 - H 1 0 serine/threonine protein kinase-related protein
540833..541438 - 603 15805563 DR0536 DR0536 - - - H 1 0 hypothetical protein
541463..542698 - 1233 15805564 DR0537 DR0537 - - - H 0 0 hypothetical protein
542702..545914 - 3210 15805565 DR0538 DR0538 - - - H 0 0 hypothetical protein
545914..546243 - 327 15805566 DR0539 DR0539 - - - H 2 2 +F 4.0 hypothetical protein
546243..547679 - 1434 15805567 DR0540 DR0540 - - - H 1 0 hypothetical protein
547773..548570 - 795 15805568 DR0541 DR0541 S COG1801 - H 0 0 conserved hypothetical protein
550134..550901 + 765 15805571 DR0544 DR0544 R COG0730 - H 0 0 conserved hypothetical protein
551643..553085 + 1440 15805574 DR0547 DR0547 - - H 2 1 hypothetical protein
607567..608190 + 621 15805622 DR0595 DR0595 - - H 1 1 hypothetical protein
627755..628261 + 504 15805643 DR0616 DR0616 R COG2018 H 1 1 conserved hypothetical protein
671909..672427 + 516 15805687 DR0660 DR0660 - - - H 1 2 conserved hypothetical protein
672543..672797 + 252 15805688 DR0661 DR0661 K COG0864 - H 1 2 +E 3.0 hypothetical protein
672788..673135 + 345 15805689 DR0662 DR0662 T COG2337 - H 1 1 conserved hypothetical protein
673239..673715 + 474 15805690 DR0663 DR0663 - - - H 2 2 +IKN 4.8 3.1 4.3 hypothetical protein
673691..674197 + 504 15805691 DR0664 DR0664 - - - H 2 2 +INY 4.1 3.5 3.6 hypothetical protein
674194..674880 - 684 15805692 DR0665 DR0665 - - - H 2 2 +I 3.0 hypothetical protein
674933..676159 - 1224 15805693 DR0666 DR0666 L COG0675 - H 2 0 +K 3.2 transposase, putative
676146..676568 - 420 15805694 DR0667 DR0667 L COG1943 - H 2 0 transposase, putative
679913..680773 + 858 15805696 DR0669 DR0669 - - - H 1 1 hypothetical protein
680828..681391 - 561 15805697 DR0670 DR0670 E COG0346 - H 1 0 hypothetical protein
758036..758461 - 423 15805767 DR0741 DR0741 - - H 1 2 hypothetical protein
798934..799401 + 465 15805810 DR0784 DR0784 L COG0494 H 1 2 MutT/nudix family protein
863542..863946 + 402 15805878 DR0852 DR0852 - - H 1 2 hypothetical protein
898277..898627 + 348 15805914 DR0889 DR0889 - - H 1 2 hypothetical protein
914327..914728 + 399 15805932 DR0907 DR0907 K COG1278 H 2 2 cold shock protein, CSD family
1060525..1061007 + 480 15806067 DR1047 DR1047 - - H 1 2 hypothetical protein
1081696..1082061 + 363 15806093 DR1073 DR1073 - - H 1 2 hypothetical protein
1115837..1116379 - 540 15806127 DR1107 DR1107 - - H 2 2 hypothetical protein
1204787..1205653 - 864 15806215 DR1196 DR1196 - - H 2 1 transposase, putative
1205621..1205929 + 306 15806216 DR1197 DR1197 - - H 1 2 hypothetical protein
1235983..1236942 - 957 15806248 DR1229 DR1229 - - - H 1 2 +CS 7.6 5.0 hypothetical protein
1237725..1240133 + 2406 15806250 DR1231 DR1231 - - - H 2 0 hypothetical protein
1240130..1240594 + 462 15806251 DR1232 DR1232 N COG2165 - H 2 2 +I 3.9 pilin, type IV, putative
1240595..1241155 + 558 15806252 DR1233 DR1233 N COG2165 - H 2 2 pilin, type IV, putative
1241155..1242036 + 879 15806253 DR1234 DR1234 - - - H 1 1 +T 4.1 hypothetical protein
1271510..1271932 - 420 15806283 DR1264 DR1264 - - H 1 2 hypothetical protein
1287573..1288208 - 633 15806300 DR1282 DR1282 - - H 1 1 hypothetical protein
1291465..1292172 + 705 15806303 DR1285 DR1285 L COG3385 H 1 2 transposase, putative
1347243..1347605 - 360 15806357 DR1340 DR1340 R COG3631 H 1 2 conserved hypothetical protein
1377290..1377784 + 492 15806389 DR1372 DR1372 - - H 1 2 hypothetical protein
1545719..1546144 - 423 15806540 DR1530 DR1530 R COG1487 H 1 2 hypothetical protein
1560924..1561427 + 501 15806553 DR1543 DR1543 - - H 2 2 hypothetical protein
1569690..1570235 - 543 15806562 DR1552 DR1552 - - H 2 2 hypothetical protein
1729132..1729503 - 369 15806709 DR1706 DR1706 - - H 1 2 hypothetical protein
1752616..1753341 - 723 15806729 DR1726 DR1726 L COG3183 H 1 2 hypothetical protein
1804004..1804456 + 450 15806775 DR1774 DR1774 - - H 1 2 hypothetical protein
1812310..1812636 + 324 15806784 DR1783 DR1783 - - H 1 2 hypothetical protein
1833326..1834627 + 1299 15806809 DR1808 DR1808 F COG0232 H 2 2 deoxyguanosinetriphosphate triphosphohydrolase-related protein
1939256..1940059 + 801 15806916 DR1917 DR1917 - - H 1 1 hypothetical protein
1964963..1965295 - 330 15806940 DR1942 DR1942 I COG0236 H 1 2 acyl carrier protein
1973085..1973639 - 552 15806950 DR1952 DR1952 - - H 1 2 hypothetical protein
2023785..2024096 - 309 15806997 DR2001 DR2001 - - H 1 2 hypothetical protein
2037927..2038322 - 393 15807015 DR2020 DR2020 - - H 1 2 hypothetical protein
2079359..2079754 - 393 15807058 DR2064 DR2064 - - H 1 2 hypothetical protein
2113016..2113408 - 390 15807096 DR2102 DR2102 R COG1487 H 2 2 plasmid stability protein, putative
2114062..2114439 - 375 15807099 DR2105 DR2105 - - H 2 2 hypothetical protein
2384150..2385106 - 954 15807372 DR2382 DR2382 - - H 2 2 hypothetical protein
2403431..2403826 + 393 15807391 DR2401 DR2401 - - H 1 2 hypothetical protein
2427408..2428163 - 753 15807663 - DR2424 L COG0675 H 1 1 putative transposase
2428583..2429191 - 606 15807413 DR2425 DR2425 L COG3335 H 2 2 hypothetical protein
2429364..2430215 + 849 15807414 DR2427 DR2427 J COG1859 H 1 1 hypothetical protein
2476894..2477421 + 525 15807465 DR2479 DR2479 - - H 2 2 hypothetical protein
2545457..2545825 - 366 15807528 DR2544 DR2544 - - H 2 2 hypothetical protein

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