Horizontal Gene Transfer Database

Correspondence analysis of relative synonymous codon usage for Chlorobium_tepidum_TLS genes:




% variability
Axis 1
16.8
Axis 2
5.5
Axis 3
4.8
Axis 4
3.6
Axis 5
3.4
Axis 6
3.2
  Red (), blue () and green squares () correspond to genes proposed as being acquired by HGT and included in regions with a low, high and non-deviated G+C content, respectively. Yellow cross diagonals (x) correspond to putative highly expressed genes.
 

Correlation values between main axis in correspondence analysis and different parameters. See the Abbreviations used:
 

%G+C1
%G+C2
%G+C3
%G+CT
Nc
P2
X2
ICDI
Axis 1
0.5
0.0
1.0
0.8
-0.6
0.7
0.3
0.4
Axis 2
0.2
0.0
-0.0
0.1
0.1
-0.2
-0.2
-0.2


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