Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Chlamydophila pneumoniae J138 (See the Abbreviations used):


Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
279106..279540 - 432 15835777 - CPj0242 - - H 1 1 hypothetical protein
283952..285463 - 1509 15835784 - CPj0249 R COG0577 - H 0 0 CT151 hypothetical protein
285682..287184 + 1500 15835786 - CPj0251 J COG0621 - H 0 0 conserved hypothetical protein
287195..287707 - 510 15835787 - CPj0252 - - - H 1 0 +W 3.3 CT144 hypothetical protein
287569..288078 - 507 15835788 - CPj0253 - - - H 0 1 +N 3.2 CT144 hypothetical protein_1
288078..288884 - 804 15835789 - CPj0254 - - - H 0 0 +T 3.0 CT143 hypothetical protein_1
288948..289787 - 837 15835790 - CPj0255 - - - H 1 1 +N 3.7 CT142 hypothetical protein_1
290017..290886 - 867 15835791 - CPj0256 - - - H 1 0 CT144 hypothetical protein_3
290886..291749 - 861 15835792 - CPj0257 - - - H 1 0 +T 3.2 CT143 hypothetical protein_2
292060..292653 - 591 15835794 - CPj0259 - - - H 1 0 CT142 hypothetical protein_2
293167..293667 - 498 15835795 secA_1 CPj0260 - - - H 2 0 protein translocase subunit
411685..412152 + 465 15835899 - CPj0366 - - + H 0 1 hypothetical protein
414060..415274 + 1212 15835902 - CPj0369 - - + H 2 0 CT058 hypothetical protein
415509..416624 + 1113 15835903 - CPj0370 - - + H 0 0 CT058 hypothetical protein
418089..419930 + 1839 15835906 gcpE CPj0373 M COG0821 + H 0 0 GcpE protein
419927..420673 + 744 15835907 - CPj0374 S COG1496 + H 2 0 +H 3.4 CT056 hypothetical protein
422053..423147 - 1092 15835910 sucB_1 CPj0377 C COG0508 + H 1 0 dihydrolipoamide succinyltransferase
426031..426477 + 444 15835912 - CPj0379 - - + H 1 2 +DE 3.2 4.6 CT053 hypothetical protein
426467..427588 + 1119 15835913 hemN_1 CPj0380 H COG0635 + H 0 0 coproporphyrinogen III oxidase
447201..447593 - 390 15835934 - CPj0401 R COG1694 H 1 2 CT255 hypothetical protein
551001..553163 - 2160 15836006 glgB CPj0475 G COG0296 + H 1 0 +W 3.0 glucan branching enzyme
553174..554163 - 987 15836007 - CPj0476 - - + H 1 0 CT865 hypothetical protein
554160..555425 - 1263 15836008 yqeV CPj0477 J COG0621 + H 0 0 hypothetical protein
555526..556944 - 1416 15836009 hflX CPj0478 R COG2262 + H 0 0 GTP binding protein
556932..557744 - 810 15836010 phnP CPj0479 R COG1235 + H 0 0 metal dependent hydrolase
557966..558622 - 654 15836011 - CPj0480 - - + H 0 0 +C 3.6 CT383 hypothetical protein
561155..564286 + 3129 15836014 - CPj0483 - - + H 0 0 hypothetical protein
564289..565146 + 855 15836015 aroG CPj0484 E COG2876 + H 2 0 deoxyheptonate aldolase
590133..591296 + 1161 15836041 tlyC_2 CPj0510 R COG1253 + H 1 0 CBS domains (hemolysin homolog)
591873..593735 + 1860 15836043 - CPj0512 - - + H 1 0 CT425 hypothetical protein
593967..595076 + 1107 15836044 - CPj0513 H COG1060 + H 1 0 Fe-S oxidoreductase
595049..595843 + 792 15836045 - CPj0514 R COG1427 + H 1 0 CT427 hypothetical protein
595812..596504 + 690 15836046 ubiE CPj0515 H COG2226 + H 1 0 ubiquinone methyltransferase
596572..598134 - 1560 15836047 - CPj0516 - - + H 1 0 hypothetical protein
604043..604375 + 330 15836054 - CPj0523 - - H 1 2 hypothetical protein
671721..672041 + 318 15836115 - CPj0583 - - H 1 1 CT466 hypothetical protein
692054..692374 - 318 15836133 - CPj0601 - - H 1 2 CT483 hypothetical protein
859290..859832 - 540 15836296 ygfA CPj0763 H COG0212 H 1 2 formyltetrahydrofolate cycloligase
877413..877802 - 387 15836312 - CPj0779 - - H 2 2 CT602 hypothetical protein
918445..920187 + 1740 15836345 mutL CPj0812 L COG0323 + H 0 0 DNA mismatch repair
920192..921259 + 1065 15836346 pepP CPj0813 E COG0006 + H 1 0 aminopeptidase P
921429..922682 + 1251 15836347 - CPj0814 - - + H 2 0 CT573 hypothetical protein
922683..924947 + 2262 15836348 gspD CPj0815 N COG1450 + H 0 0 general secretion protein D
924937..926427 + 1488 15836349 gspE CPj0816 N COG2804 + H 1 0 genral secretion protein E
926437..927612 + 1173 15836350 gspF CPj0817 N COG1459 + H 1 0 general secretion protein F
928011..928457 + 444 15836352 - CPj0819 - - + H 1 1 CT568 hypothetical protein
974710..975078 - 366 15836390 - CPj0857 - - H 2 2 CT716 hypothetical protein
1062206..1062682 + 474 15836463 - CPj0930 - - H 1 1 hypothetical protein
1201820..1202575 + 753 15836583 - CPj1052 - - H 1 1 hypothetical protein

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