| Coordinates | Strand | Length | PID | Gene name | Synonym | FunctionCode | COG | GCRegion | HGT | SimGC | SimMah | Dev.AA | Function |
| 127402..127764 | - | 360 | 15791513 | Cj0125c | Cj0125c | T | COG1734 | H | 1 | 2 | dksA-like protein | ||
| 258355..258777 | + | 420 | 15791650 | Cj0280 | Cj0280 | - | - | H | 1 | 1 | hypothetical protein Cj0280 | ||
| 266622..267374 | - | 750 | 15791659 | peb3 | Cj0289c | P | COG0725 | + | H | 0 | 0 | major antigenic peptide PEB3 | |
| 267638..268597 | - | 957 | 15791660 | glpT' | Cj0291c | G | COG2271 | + | H | 0 | 0 | glycerol-3-phosphate transporter (possible pseudogene) | |
| 269064..269840 | + | 774 | 15791661 | surE | Cj0293 | R | COG0496 | + | H | 0 | 0 | SurE protein homolog | |
| 269830..270489 | + | 657 | 15791662 | Cj0294 | Cj0294 | H | COG1179 | + | H | 0 | 0 | moeB/thiF family protein | |
| 271041..271421 | - | 378 | 15791664 | panD | Cj0296c | H | COG0853 | + | H | 0 | 2 | aspartate 1-decarboxylase precursor | |
| 271418..272266 | - | 846 | 15791665 | panC | Cj0297c | H | COG0414 | + | H | 1 | 0 | pantoate--beta-alanine ligase | |
| 272277..273101 | - | 822 | 15791666 | panB | Cj0298c | H | COG0413 | + | H | 0 | 0 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | |
| 434408..435607 | + | 1197 | 15791834 | tuf | Cj0470 | J | COG0050 | H | 1 | 1 | elongation factor TU | ||
| 543588..544187 | + | 597 | 15791944 | Cj0584 | Cj0584 | L | COG0470 | - | H | 1 | 0 | hypothetical protein Cj0584 | |
| 547256..548260 | + | 1002 | 15791947 | Cj0587 | Cj0587 | - | - | - | H | 2 | 0 | +F 4.5 | putative integral membrane protein |
| 548257..549018 | + | 759 | 15791948 | tlyA | Cj0588 | J | COG1189 | - | H | 0 | 0 | putative haemolysin | |
| 548984..549838 | + | 852 | 15791949 | ribF | Cj0589 | H | COG0196 | - | H | 0 | 0 | putative riboflavin kinase /FMN adenylyltransferase | |
| 549825..550535 | + | 708 | 15791950 | Cj0590 | Cj0590 | Q | COG0500 | - | H | 0 | 0 | hypothetical protein Cj0590 | |
| 550743..551177 | - | 432 | 15791952 | Cj0592c | Cj0592c | - | - | H | 1 | 2 | putative periplasmic protein | ||
| 597416..597799 | + | 381 | 15791995 | Cj0635 | Cj0635 | L | COG0816 | H | 1 | 2 | hypothetical protein Cj0635 | ||
| 599381..599899 | - | 516 | 15791998 | ppa | Cj0638c | C | COG0221 | H | 1 | 1 | inorganic pyrophosphatase | ||
| 760417..760722 | - | 303 | 15792146 | Cj0808c | Cj0808c | - | - | H | 1 | 1 | small hydrophobic protein | ||
| 814539..815099 | - | 558 | 15792206 | Cj0874c | Cj0874c | C | COG3258 | H | 2 | 1 | cytochrome C | ||
| 815432..815524 | - | 90 | 15792208 | Cj0877c | Cj0877c | - | - | - | H | 2 | 2 | +IY 3.4 6.3 | very hypothetical protein Cj0877c |
| 815545..815691 | + | 144 | 15792209 | Cj0878 | Cj0878 | - | - | - | H | 2 | 2 | hypothetical protein Cj0878 | |
| 815669..816301 | - | 630 | 15792210 | Cj0879c | Cj0879c | - | - | - | H | 2 | 0 | putative periplasmic protein | |
| 816524..817570 | - | 1044 | 15792212 | Cj0881c | Cj0881c | R | COG2404 | - | H | 1 | 0 | hypothetical protein Cj0881c | |
| 819740..820150 | - | 408 | 15792214 | Cj0883c | Cj0883c | K | COG1959 | - | H | 0 | 0 | hypothetical protein Cj0883c | |
| 847394..847846 | + | 450 | 15792239 | Cj0910 | Cj0910 | - | - | H | 1 | 2 | putative periplasmic protein | ||
| 911674..912252 | + | 576 | 15792304 | Cj0977 | Cj0977 | Q | COG2050 | H | 1 | 1 | hypothetical protein Cj0977 | ||
| 927771..928337 | + | 564 | 15792324 | Cj0997 | Cj0997 | M | COG0357 | H | 1 | 1 | gidB homolog | ||
| 977626..978771 | - | 1143 | 15792371 | thiH | Cj1044c | H | COG1060 | + | H | 0 | 0 | thiH protein | |
| 978774..979550 | - | 774 | 15792372 | thiG | Cj1045c | F | COG2022 | + | H | 2 | 0 | +A 3.6 | thiG protein |
| 979553..980356 | - | 801 | 15792373 | moeB | Cj1046c | H | COG0476 | + | H | 1 | 0 | putative molybdopterin biosynthesis protein | |
| 980353..980544 | - | 189 | 15792374 | Cj1047c | Cj1047c | H | COG2104 | + | H | 1 | 2 | +E 3.5 | hypothetical protein Cj1047c |
| 980554..981651 | - | 1095 | 15792375 | dapE | Cj1048c | E | COG0624 | + | H | 1 | 0 | succinyl-diaminopimelate desuccinylase | |
| 982247..982948 | - | 699 | 15792377 | Cj1050c | Cj1050c | H | COG0846 | + | H | 1 | 0 | putative transferase | |
| 1011696..1012148 | + | 450 | 15792404 | Cj1079 | Cj1079 | - | - | H | 1 | 1 | putative periplasmic protein | ||
| 1068701..1070248 | + | 1545 | 15792460 | Cj1135 | Cj1135 | M | COG0463 | - | H | 0 | 0 | putative two-domain glycosyltransferase | |
| 1071408..1072403 | - | 993 | 15792462 | Cj1137c | Cj1137c | - | - | - | H | 1 | 0 | hypothetcal protein Cj1137c | |
| 1072461..1073630 | + | 1167 | 15792463 | Cj1138 | Cj1138 | M | COG0463 | - | H | 1 | 0 | putative galactosyltransferase | |
| 1073619..1074530 | - | 909 | 15792464 | Cj1139c | Cj1139c | M | COG0463 | - | H | 2 | 0 | putative galactosyltransferase | |
| 1074585..1075469 | + | 882 | 15792465 | Cj1140 | Cj1140 | - | - | - | H | 2 | 0 | +Y 3.8 | hypothetical protein Cj1140 |
| 1076478..1077593 | + | 1113 | 15792467 | neuC1 | Cj1142 | M | COG0381 | - | H | 1 | 0 | putative N-acetylglucosamine-6-phosphate 2-epimerase/N-acetylglucosamine-6-phosphatase | |
| 1077590..1079200 | + | 1608 | 15792468 | neuA1 | Cj1143 | M | COG1083 | - | H | 0 | 0 | acylneuraminate cytidylyltransferase | |
| 1079195..1079788 | - | 591 | 15792469 | Cj1144c | Cj1144c | - | - | - | H | 1 | 0 | +W 3.4 | hypothetical protein Cj1144c |
| 1079724..1080041 | - | 315 | 15792470 | Cj1145c | Cj1145c | - | - | - | H | 1 | 2 | +Y 3.2 | hypothetical protein Cj1145c |
| 1136955..1137581 | + | 624 | 15792532 | Cj1208 | Cj1208 | H | COG0212 | H | 1 | 2 | hypothetical protein Cj1208 | ||
| 1189121..1190395 | + | 1272 | 15792583 | porA | Cj1259 | - | - | H | 1 | 2 | major outer membrane protein | ||
| 1222303..1223634 | - | 1329 | 15792613 | accC | Cj1290c | I | COG0439 | + | H | 1 | 0 | biotin carboxylase | |
| 1223636..1224091 | - | 453 | 15792614 | accB | Cj1291c | I | COG0511 | + | H | 1 | 2 | +P 5.8 | putative biotin carboxyl carrier protein of acetyl-CoA carboxylase |
| 1224239..1224799 | + | 558 | 15792615 | dcd | Cj1292 | F | COG0717 | + | H | 1 | 0 | possible deoxycytidine triphosphate deaminase | |
| 1224849..1225853 | + | 1002 | 15792616 | Cj1293 | Cj1293 | M | COG1086 | + | H | 1 | 0 | possible sugar nucleotide epimerase/dehydratase | |
| 1225855..1226985 | + | 1128 | 15792617 | Cj1294 | Cj1294 | M | COG0399 | + | H | 0 | 0 | putative aminotransferase (degT family) | |
| 1226978..1228285 | + | 1305 | 15792618 | Cj1295 | Cj1295 | - | - | + | H | 1 | 0 | hypothetical protein Cj1295 | |
| 1228282..1228641 | + | 357 | 15792619 | Cj1296 | Cj1296 | Q | COG2746 | H | 1 | 2 | hypothetical protein Cj1296 | ||
| 1251467..1251787 | + | 318 | 15792645 | Cj1322 | Cj1322 | - | - | H | 2 | 1 | hypothetical protein Cj1322 | ||
| 1364671..1366419 | - | 1746 | 15792749 | Cj1431c | Cj1431c | - | - | - | H | 0 | 0 | hypothetical protein Cj1431c | |
| 1366422..1369517 | - | 3093 | 15792750 | Cj1432c | Cj1432c | M | COG0438 | - | H | 0 | 0 | putative sugar transferase | |
| 1369527..1370633 | - | 1104 | 15792751 | Cj1433c | Cj1433c | - | - | - | H | 0 | 0 | hypothetical protein Cj1433c | |
| 1370667..1372004 | - | 1335 | 15792752 | Cj1434c | Cj1434c | M | COG0463 | - | H | 0 | 0 | putative sugar transferase | |
| 1372056..1372691 | - | 633 | 15792753 | Cj1435c | Cj1435c | E | COG0560 | - | H | 0 | 0 | hypothetical protein Cj1435c | |
| 1372695..1373867 | - | 1170 | 15792754 | Cj1436c | Cj1436c | E | COG0079 | - | H | 0 | 0 | putative aminotransferase | |
| 1373917..1375020 | - | 1101 | 15792755 | Cj1437c | Cj1437c | E | COG0079 | - | H | 0 | 0 | putative aminotransferase | |
| 1375007..1377337 | - | 2328 | 15792756 | Cj1438c | Cj1438c | M | COG0463 | - | H | 1 | 0 | putative sugar transferase | |
| 1377339..1378445 | - | 1104 | 15792757 | glf | Cj1439c | M | COG0562 | - | H | 0 | 0 | +Y 3.5 | UDP-galactopyranose mutase |
| 1378483..1379706 | - | 1221 | 15792758 | Cj1440c | Cj1440c | M | COG0463 | - | H | 2 | 0 | putative sugar transferase | |
| 1379716..1380897 | - | 1179 | 15792759 | kfiD | Cj1441c | M | COG1004 | - | H | 1 | 0 | putative UDP-glucose 6-dehydrogenase | |
| 1380894..1382528 | - | 1632 | 15792760 | Cj1442c | Cj1442c | M | COG0463 | - | H | 1 | 0 | hypothetical protein Cj1442c | |
| 1487089..1488591 | - | 1500 | 15792861 | Cj1553c | Cj1553c | L | COG0286 | H | 2 | 1 | putative type I restriction enzyme M protein | ||
| 1508922..1509425 | - | 501 | 15792883 | nuoB | Cj1578c | C | COG0377 | H | 2 | 1 | NADH dehydrogenase I chain B | ||
| 1556443..1556832 | + | 387 | 15792934 | exbD2 | Cj1629 | N | COG0848 | H | 1 | 2 | putative exbD/tolR family transport protein | ||
| 1587332..1587985 | + | 651 | 15792967 | Cj1663 | Cj1663 | R | COG1136 | H | 1 | 1 | putative ABC transport system ATP-binding protein | ||
| 1589680..1590096 | - | 414 | 15792972 | Cj1668c | Cj1668c | - | - | H | 1 | 2 | putative periplasmic protein | ||
| 1629320..1630396 | - | 1074 | 15793021 | leuB | Cj1718c | E | COG0473 | + | H | 1 | 0 | 3-isopropylmalate dehydrogenase | |
| 1630393..1631928 | - | 1533 | 15793022 | leuA | Cj1719c | E | COG0119 | + | H | 0 | 0 | 2-isopropylmalate synthase | |
| 1632248..1632877 | + | 627 | 15793023 | Cj1720 | Cj1720 | - | - | + | H | 0 | 0 | hypothetical protein Cj1720 | |
| 1633791..1633892 | - | 99 | 15793025 | Cj1722c | Cj1722c | - | - | + | H | 1 | 2 | +MNSWY 3.6 3.9 -3.5 3.4 5.5 | hypothetical protein Cj1722c |
| 1633895..1634119 | - | 222 | 15793026 | Cj1723c | Cj1723c | - | - | + | H | 2 | 2 | +P 7.6 | putative periplasmic protein |
| 1634296..1634679 | - | 381 | 15793027 | Cj1724c | Cj1724c | R | COG0780 | + | H | 0 | 2 | hypothetical protein Cj1724c | |
| 1634839..1635438 | + | 597 | 15793028 | Cj1725 | Cj1725 | - | - | + | H | 2 | 1 | putative periplasmic protein |