Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Caulobacter crescentus (See the Abbreviations used):
Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
35047..35667 - 618 16124289 - CC0033 - - H 2 2 hypothetical protein
69493..69774 - 279 16124324 - CC0069 S COG2350 + H 0 0 conserved hypothetical protein
69794..70789 - 993 16124325 - CC0070 C COG0240 + H 2 0 glycerol-3-phosphate dehydrogenase (NAD+)
70801..71904 - 1101 16124326 - CC0071 O COG0533 + H 0 0 peptidase M22 family protein
71977..72945 + 966 16124327 - CC0072 H COG0181 + H 1 0 porphobilinogen deaminase
73662..74576 + 912 16124329 - CC0074 - - + H 2 0 hypothetical protein
74573..76108 + 1533 16124330 - CC0075 S COG3898 + H 1 0 hypothetical protein
109239..110969 - 1728 16124355 - CC0100 - - + H 2 0 hypothetical protein
110979..111659 - 678 16124356 - CC0101 G COG0036 + H 0 0 ribulose-phosphate 3-epimerase
111745..113034 - 1287 16124357 - CC0102 J COG0144 + H 2 0 rRNA methyltransferase RsmB
113097..113375 + 276 16124358 - CC0103 - - + H 2 2 +P 3.0 hypothetical protein
115289..115990 - 699 16124360 - CC0105 F COG0284 + H 0 0 orotidine 5'-phosphate decarboxylase
154535..154912 - 375 16124398 - CC0143 L COG0792 H 1 2 conserved hypothetical protein
390176..390544 + 366 16124625 - CC0370 - - H 1 2 hypothetical protein
493699..494181 - 480 16124726 - CC0471 J COG0219 H 2 2 spoU rRNA methylase family protein
625313..626785 + 1470 16124829 - CC0575 R COG0457 H 2 1 beta-lactamase, putative
640017..640571 - 552 16124839 - CC0585 - - H 1 1 hypothetical protein
647358..647741 - 381 16124845 - CC0591 T COG0784 H 2 2 chemotaxis protein CheYII
657507..658358 + 849 16124854 - CC0600 - - H 1 1 hypothetical protein
661391..664099 - 2706 16124856 - CC0602 - - - H 1 0 hypothetical protein
665867..666142 - 273 16124858 - CC0604 - - - H 2 2 +C 3.1 hypothetical protein
666346..666663 - 315 16124859 - CC0605 - - - H 1 2 +HS 3.2 5.5 hypothetical protein
666612..666869 - 255 16124860 - CC0606 - - - H 1 2 +R 4.3 hypothetical protein
667326..667472 + 144 16124861 - CC0607 - - - H 1 2 hypothetical protein
693187..693561 - 372 16124879 - CC0626 - - H 2 2 hypothetical protein
707070..707465 - 393 16124892 - CC0639 S COG3742 H 1 2 conserved hypothetical protein
745857..746732 - 873 16124932 - CC0679 R COG1266 H 2 2 hypothetical protein
787414..787890 - 474 16124971 - CC0718 P COG3793 H 1 1 hypothetical protein
949518..949889 - 369 16125106 - CC0853 - - H 1 2 hypothetical protein
1035444..1036019 + 573 16125185 - CC0933 - - H 2 2 transcriptional regulator
1055210..1055755 + 543 16125201 - CC0949 - - H 2 1 transcriptional regulator
1058784..1059104 - 318 16125204 - CC0952 - - H 1 2 fliO protein
1065072..1066277 - 1203 16125212 - CC0960 Q COG1228 + H 1 0 imidazolonepropionase
1066362..1067741 + 1377 16125213 - CC0961 F COG0402 + H 0 0 chlorohydrolase
1067738..1068445 + 705 16125214 - CC0962 K COG2188 + H 1 0 histidine utilization repressor
1085640..1086134 - 492 16125225 - CC0973 - - H 2 2 hypothetical protein
1086754..1087473 - 717 16125227 - CC0975 - - H 2 2 hypothetical protein
1161043..1162899 + 1854 16125283 - CC1031 - - H 2 2 hypothetical protein
1162896..1164131 + 1233 16125284 - CC1032 - - H 2 2 hypothetical protein
1164128..1165135 - 1005 16125285 - CC1033 L COG0270 H 2 2 C-5 cytosine-specific DNA methylase
1172402..1172704 - 300 16125292 - CC1040 - - H 1 2 hypothetical protein
1173112..1173477 - 363 16125294 - CC1042 - - H 2 2 hypothetical protein
1220943..1221419 + 474 16125340 - CC1088 - - H 2 2 hypothetical protein
1345937..1346344 - 405 16125438 - CC1186 - - H 2 2 conserved hypothetical protein
1372013..1372495 - 480 16125462 - CC1212 - - H 1 2 hypothetical protein
1405021..1405353 + 330 16125495 - CC1246 - - H 2 2 hypothetical protein
1420225..1420671 + 444 16125523 - CC1274 - - H 1 2 hypothetical protein
1512066..1512539 + 471 16125607 - CC1358 K COG1327 H 1 2 conserved hypothetical protein
1519601..1520140 + 537 16125616 - CC1367 - - H 1 2 hypothetical protein
1541903..1542211 + 306 16125641 - CC1392 - - H 1 2 hypothetical protein
1608290..1608715 + 423 16125707 - CC1458 - - H 2 2 flbT protein
1632874..1633317 - 441 16125726 - CC1479 - - H 2 2 hypothetical protein
1756259..1756573 + 312 16125837 - CC1590 - - H 1 2 hypothetical protein
1786539..1786868 - 327 16125860 - CC1613 S COG3785 H 2 2 conserved hypothetical protein
1818269..1818703 - 432 16125886 - CC1640 K COG3682 H 1 2 transcriptional regulator, BlaI family
1880553..1880906 - 351 16125951 - CC1707 - - H 1 2 hypothetical protein
1886251..1886643 - 390 16125956 - CC1712 - - H 2 2 hypothetical protein
1886510..1887121 - 609 16125957 - CC1713 - - H 2 2 hypothetical protein
1897513..1897815 + 300 16125969 - CC1725 O COG2919 H 2 2 conserved hypothetical protein
1900367..1900819 + 450 16125972 - CC1728 - - H 2 2 hypothetical protein
1950201..1950827 - 624 16126010 - CC1766 L COG0582 H 2 2 conserved hypothetical protein
1969315..1970508 + 1191 16126027 - CC1783 - - H 2 2 hypothetical protein
1972750..1973373 + 621 16126030 - CC1786 K COG1309 H 2 2 transcriptional regulator, TetR family
2029586..2030089 - 501 16126077 - CC1834 R COG3324 H 2 2 conserved hypothetical protein
2030153..2030488 - 333 16126078 - CC1835 - - H 1 2 hypothetical protein
2052597..2052953 - 354 16126102 - CC1859 R COG2151 H 1 1 conserved hypothetical protein
2060317..2060871 - 552 16126111 - CC1868 - - H 2 2 hypothetical protein
2218880..2219272 - 390 16126260 - CC2017 - - H 1 2 hypothetical protein
2227026..2227412 - 384 16126269 - CC2026 - - H 1 2 hypothetical protein
2234784..2235338 - 552 16126274 - CC2031 R COG0457 H 1 2 TPR domain protein
2249591..2250052 - 459 16126286 - CC2044 - - H 1 2 hypothetical protein
2295598..2296050 + 450 16126325 - CC2086 - - H 1 2 hypothetical protein
2383093..2383404 - 309 16126414 - CC2175 N COG1886 H 1 2 FliN family protein
2416566..2416886 + 318 16126451 - CC2212 - - H 2 2 hypothetical protein
2439177..2439749 - 570 16126479 - CC2240 - - H 2 2 hypothetical protein
2494539..2495288 - 747 16126532 - CC2293 - - H 2 2 hypothetical protein
2538311..2538745 - 432 16126574 - CC2335 N COG0848 H 2 1 ExbD/TolR family protein
2578373..2578690 + 315 16126616 - CC2377 S COG0393 H 1 2 conserved hypothetical protein
2617929..2618384 - 453 16126652 - CC2413 - - H 1 2 hypothetical protein
2650069..2650464 + 393 16126684 - CC2445 - - H 2 2 hypothetical protein
2669959..2670351 - 390 16126702 - CC2463 T COG0784 H 2 2 polar differentiation response regulator
2673445..2673804 + 357 16126706 - CC2467 S COG2127 H 2 2 conserved hypothetical protein
2798677..2799141 - 462 16126827 - CC2589 - - H 2 2 hypothetical protein
2897260..2897703 + 441 16126913 - CC2678 - - H 1 2 hypothetical protein
2907536..2908117 + 579 16126925 - CC2692 - - H 1 1 hypothetical protein
2908266..2908451 + 183 16126926 - CC2693 - - - H 1 2 hypothetical protein
2910227..2910361 - 132 16126928 - CC2695 P COG1629 - H 2 2 +Y 6.1 hypothetical protein
2910704..2912155 + 1449 16126929 - CC2696 S COG1652 - H 0 0 peptidoglycan binding domain protein
2912575..2913360 + 783 16126930 - CC2697 - - - H 2 2 hypothetical protein
2913370..2913966 + 594 16126931 - CC2698 - - - H 2 2 hypothetical protein
2913989..2914474 - 483 16126932 - CC2699 - - - H 1 2 +SW 4.7 3.3 hypothetical protein
2914593..2916311 + 1716 16126933 - CC2700 - - - H 0 0 hypothetical protein
2918042..2918743 + 699 16126936 - CC2703 T COG2114 - H 2 1 hypothetical protein
2918756..2919265 + 507 16126937 - CC2704 - - - H 2 2 hypothetical protein
2919526..2919756 - 228 16126938 - CC2705 K COG1396 - H 2 2 +N 3.5 transcriptional regulator, Cro/CI family
2931436..2931915 + 477 16126948 - CC2715 - - H 1 2 transcriptional regulator, Cro/CI family
2943839..2944126 + 285 16126960 - CC2727 O COG0695 - H 2 2 +T 3.2 conserved hypothetical protein
2944180..2944557 + 375 16126961 - CC2728 L COG2963 - H 0 2 ISCc3, transposase OrfA
2945587..2947551 - 1962 16126963 - CC2730 - - - H 1 2 +QS 3.9 4.2 hypothetical protein
2947557..2947928 - 369 16126964 - CC2731 - - - H 2 2 +CG 8.2 3.2 hypothetical protein
2947999..2948649 - 648 16126965 - CC2732 - - - H 2 2 +CS 4.8 3.1 hypothetical protein
2949220..2949360 - 138 16126966 - CC2733 - - - H 2 2 +FL 5.0 4.3 hypothetical protein
2949385..2951274 + 1887 16126967 - CC2734 - - - H 1 0 +T 3.2 hypothetical protein
2951498..2952832 - 1332 16126968 - CC2735 R COG3550 - H 2 1 conserved hypothetical protein
2952829..2953683 - 852 16126969 - CC2736 K COG1396 - H 1 2 transcriptional regulator, Cro/CI family
2953787..2954236 - 447 16126970 - CC2737 - - - H 2 2 +RS 3.2 3.5 hypothetical protein
2954242..2954595 + 351 16126971 - CC2738 - - H 1 2 hypothetical protein
2954606..2954998 + 390 16126972 - CC2739 - - - H 1 2 +R 3.2 transposase, putative
2955087..2956151 + 1062 16126973 - CC2740 L COG3547 - H 0 1 IS1111A/IS1328/IS1533 family transposase
2970970..2971272 - 300 16126988 - CC2756 N COG3668 H 2 2 conserved hypothetical protein
2993669..2994175 - 504 16127011 - CC2779 - - H 2 2 hypothetical protein
3049394..3050395 + 999 16127058 - CC2826 R COG0714 + H 0 0 moxR protein
3050404..3051291 + 885 16127059 - CC2827 S COG1721 + H 1 0 conserved hypothetical protein
3051288..3052442 + 1152 16127060 - CC2828 - - + H 2 0 +P 3.0 hypothetical protein
3052361..3054610 + 2247 16127061 - CC2829 - - + H 2 0 hypothetical protein
3054484..3056331 + 1845 16127062 - CC2830 - - + H 2 0 hypothetical protein
3077392..3077901 - 507 16127082 - CC2850 - - H 2 1 hypothetical protein
3203860..3204627 - 765 16127217 - CC2987 - - H 1 1 hypothetical protein
3243489..3243944 - 453 16127258 - CC3028 K COG0640 H 2 2 transcriptional regulator, ArsR family
3308820..3309176 - 354 16127309 - CC3079 S COG2361 H 1 1 conserved hypothetical protein
3430447..3430752 - 303 16127413 - CC3183 K COG1695 H 1 2 conserved hypothetical protein
3471943..3472677 - 732 16127443 - CC3213 - - H 1 1 hypothetical protein
3502036..3502992 + 954 16127470 - CC3240 - - H 2 2 hypothetical protein
3525876..3526547 - 669 16127501 - CC3271 - - H 2 1 hypothetical protein
3613160..3613552 - 390 16127593 - CC3363 N COG3654 H 1 2 death on curing protein
3645926..3646528 - 600 16127633 - CC3403 C COG3175 H 1 2 cytochrome c oxidase assembly protein, putative
3673038..3673475 - 435 16127659 - CC3429 - - H 2 2 hypothetical protein
3741046..3741471 - 423 16127727 - CC3497 K COG1396 H 1 2 hypothetical protein
3759551..3760276 - 723 16127744 - CC3514 - - - H 2 2 hypothetical protein
3760242..3760808 - 564 16127745 - CC3515 S COG3600 - H 2 2 conserved hypothetical protein
3760947..3761321 - 372 16127746 - CC3516 - - - H 1 2 hypothetical protein
3761421..3761735 + 312 16127747 - CC3517 - - - H 1 2 +DGR -3.0 3.2 3.0 hypothetical protein
3761878..3762249 + 369 16127748 - CC3518 L COG2827 - H 1 2 +W 4.0 conserved hypothetical protein
3763118..3763495 - 375 16127750 - CC3520 - - - H 1 2 +PS 5.3 3.8 hypothetical protein
3796031..3796417 - 384 16127778 - CC3548 - - H 1 2 hypothetical protein

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