Horizontal Gene Transfer Database

 

Proposed horizontally transferred genes for Agrobacterium tumefaciens str. C58 (Cereon) circular chromosome (See the Abbreviations used):


Coordinates  Strand Length PID Gene name Synonym FunctionCode COG GCRegion HGT SimGC SimMah Dev.AA Function
19439..19840 - 399 15887381 - AGR_C_37 O COG0526 H 1 2 AGR_C_37p
34023..34487 - 462 15887390 - AGR_C_51 T COG1493 H 1 1 AGR_C_51p
50756..51331 + 573 15887407 - AGR_C_81 - - H 2 2 AGR_C_81p
58498..59040 - 540 15887411 - AGR_C_88 - - - H 1 2 +HQS 3.3 4.8 3.6 AGR_C_88p
59037..59570 - 531 15887412 - AGR_C_89 - - - H 2 2 +F 3.5 AGR_C_89p
62034..62291 + 255 15887413 - AGR_C_90 - - - H 2 2 +CT 3.2 4.0 AGR_C_90p
62714..62983 - 267 15887414 - AGR_C_91 - - - H 1 2 AGR_C_91p
64853..66085 - 1230 15887416 - AGR_C_93 K COG1940 - H 0 0 AGR_C_93p
70987..71385 + 396 15887422 - AGR_C_104 F COG1780 H 1 1 AGR_C_104p
101313..101837 + 522 15887451 - AGR_C_148 F COG0537 H 1 2 AGR_C_148p
105269..106027 - 756 15887456 - AGR_C_157 M COG2148 - H 1 0 AGR_C_157p
108694..109152 - 456 15887458 - AGR_C_159 S COG2606 H 1 1 AGR_C_159p
109340..109831 + 489 15887459 - AGR_C_161 K COG1278 - H 2 2 AGR_C_161p
109840..110022 + 180 15887460 - AGR_C_162 - - - H 2 2 AGR_C_162p
110019..110120 - 99 15887461 - AGR_C_163 - - - H 2 2 +FHT 6.3 3.2 -3.3 AGR_C_163p
111799..112332 - 531 15887463 - AGR_C_167 K COG1846 - H 1 0 AGR_C_167p
112523..112933 - 408 15887464 - AGR_C_168 - - - H 2 2 +F 4.0 AGR_C_168p
116098..116817 + 717 15887466 - AGR_C_171 - - - H 1 0 AGR_C_171p
116906..117196 + 288 15887467 - AGR_C_173 J COG0333 - H 2 2 +K 3.1 AGR_C_173p
128514..128840 + 324 15887478 - AGR_C_196 - - H 2 2 AGR_C_196p
216335..216721 + 384 15887564 - AGR_C_365 - - H 1 2 AGR_C_365p
224225..225613 - 1386 15887571 - AGR_C_376 D COG2894 - H 0 0 AGR_C_376p
225543..226295 - 750 15887572 - AGR_C_378 - - - H 0 0 AGR_C_378p
226292..227875 - 1581 15887573 - AGR_C_379 N COG1450 - H 0 0 AGR_C_379p
228812..229324 - 510 15887575 - AGR_C_382 N COG1989 - H 2 2 AGR_C_382p
229426..229686 - 258 15887576 - AGR_C_383 - - - H 1 2 +T 3.9 AGR_C_383p
230435..230680 - 243 15887578 - AGR_C_385 - - - H 2 2 +AHS -3.1 3.3 5.7 AGR_C_385p
230837..231142 - 303 15887579 - AGR_C_387 O COG3526 - H 0 2 AGR_C_387p
355543..355965 + 420 15887712 - AGR_C_630 K COG1396 H 1 1 AGR_C_630p
410000..410299 - 297 15887761 - AGR_C_724 - - - H 1 2 +C 5.1 AGR_C_724p
410362..410514 - 150 15887762 - AGR_C_725 - - - H 2 2 +I 5.5 AGR_C_725p
410560..410802 - 240 15887763 - AGR_C_727 S COG0401 - H 2 2 +IL 5.0 3.3 AGR_C_727p
430792..432948 + 2154 15887781 - AGR_C_765 L COG0210 H 2 1 AGR_C_765p
432948..433628 + 678 15887782 - AGR_C_766 - - H 2 2 AGR_C_766p
433630..434679 - 1047 15887783 - AGR_C_767 L COG0582 H 2 1 AGR_C_767p
455120..456292 + 1170 15887812 - AGR_C_819 R COG3500 - H 0 0 AGR_C_819p
457340..457681 + 339 15887814 - AGR_C_824 - - - H 1 2 AGR_C_824p
459035..459448 + 411 15887815 - AGR_C_828 - - - H 2 2 +S 3.3 AGR_C_828p
459805..459936 - 129 15887816 - AGR_C_830 - - - H 1 2 +SW 7.1 3.6 AGR_C_830p
460316..460609 - 291 15887817 - AGR_C_832 - - - H 0 2 +M 3.1 AGR_C_832p
460903..461556 + 651 15887818 - AGR_C_835 M COG2335 - H 1 0 +K 3.0 AGR_C_835p
461645..462499 - 852 15887819 - AGR_C_837 - - - H 0 0 +T 4.3 AGR_C_837p
496302..496931 + 627 15887854 - AGR_C_894 - - H 2 1 AGR_C_894p
521338..521766 + 426 15887877 - AGR_C_934 M COG1970 H 2 1 AGR_C_934p
567293..567655 + 360 15887928 - AGR_C_1030 - - H 2 2 AGR_C_1030p
718168..718683 + 513 15888062 - AGR_C_1303 - - H 2 2 AGR_C_1303p
718822..719478 + 654 15888063 - AGR_C_1304 R COG0110 H 2 1 AGR_C_1304p
740064..740447 + 381 15888083 - AGR_C_1340 S COG3603 H 2 2 AGR_C_1340p
740490..740861 + 369 15888084 - AGR_C_1343 - - H 1 2 AGR_C_1343p
742074..742493 + 417 15888087 - AGR_C_1349 - - H 1 1 AGR_C_1349p
758373..758681 + 306 15888105 - AGR_C_1386 R COG1694 H 1 2 AGR_C_1386p
830710..831117 - 405 15888172 - AGR_C_1520 - - H 2 2 AGR_C_1520p
857752..858102 + 348 15888200 - AGR_C_1570 - - H 1 2 AGR_C_1570p
877543..877995 + 450 15888223 - AGR_C_1611 - - H 1 2 AGR_C_1611p
889491..889892 + 399 15888237 - AGR_C_1639 - - H 2 2 AGR_C_1639p
903949..904335 + 384 15888252 - AGR_C_1665 P COG2212 H 1 2 AGR_C_1665p
911241..911678 + 435 15888261 - AGR_C_1681 - - H 2 1 AGR_C_1681p
923938..924273 - 333 15888273 - AGR_C_1701 S COG3041 H 1 2 AGR_C_1701p
936722..937294 - 570 15888287 - AGR_C_1731 K COG1733 H 1 2 AGR_C_1731p
943497..944663 + 1164 15888294 - AGR_C_1743 - - + H 1 0 AGR_C_1743p
945229..945801 + 570 15888296 - AGR_C_1747 R COG3740 + H 1 0 +R 3.3 AGR_C_1747p
945834..947102 + 1266 15888297 - AGR_C_1748 - - + H 1 0 AGR_C_1748p
947200..947769 + 567 15888298 - AGR_C_1750 - - + H 2 0 AGR_C_1750p
947773..948108 + 333 15888299 - AGR_C_1752 - - + H 2 1 +R 3.0 AGR_C_1752p
948087..948500 + 411 15888300 - AGR_C_1754 - - + H 0 0 AGR_C_1754p
950197..950559 + 360 15888303 - AGR_C_1758 - - + H 2 1 AGR_C_1758p
950771..951175 - 402 15888305 - AGR_C_1763 - - + H 1 0 AGR_C_1763p
951510..952091 + 579 15888306 - AGR_C_1765 - - + H 2 2 +G 4.9 AGR_C_1765p
952152..952790 + 636 15888307 - AGR_C_1766 - - + H 1 0 AGR_C_1766p
953668..954102 + 432 15888309 - AGR_C_1771 M COG0791 + H 2 0 AGR_C_1771p
954120..957920 + 3798 15888310 - AGR_C_1774 - - + H 2 0 AGR_C_1774p
958619..959320 + 699 15888313 - AGR_C_1778 T COG0745 + H 0 0 AGR_C_1778p
959310..960710 + 1398 15888314 - AGR_C_1780 T COG0642 + H 1 0 AGR_C_1780p
960969..961346 + 375 15888315 - AGR_C_1782 - - + H 2 2 AGR_C_1782p
961497..962669 + 1170 15888316 - AGR_C_1784 R COG0457 + H 1 0 AGR_C_1784p
962666..963163 + 495 15888317 - AGR_C_1786 O COG2332 + H 0 0 AGR_C_1786p
965898..967469 + 1569 15888320 - AGR_C_1792 O COG0265 + H 0 0 AGR_C_1792p
967742..968500 + 756 15888321 - AGR_C_1793 T COG0745 + H 0 0 AGR_C_1793p
968501..969919 + 1416 15888322 - AGR_C_1794 T COG0642 + H 0 0 AGR_C_1794p
987515..988384 - 867 15888335 - AGR_C_1820 G COG0697 H 1 1 AGR_C_1820p
1007337..1007684 - 345 15888356 - AGR_C_1868 - - H 1 2 AGR_C_1868p
1013739..1014836 + 1095 15888364 - AGR_C_1880 - - H 1 1 AGR_C_1880p
1024646..1025095 - 447 15888373 - AGR_C_1899 - - H 2 2 AGR_C_1899p
1030013..1030390 + 375 15888380 - AGR_C_1913 T COG0784 H 1 2 AGR_C_1913p
1047805..1048365 - 558 15888398 - AGR_C_1949 - - H 1 2 AGR_C_1949p
1128148..1128717 - 567 15888476 - AGR_C_2108 - - H 2 2 AGR_C_2108p
1137303..1137866 - 561 15888484 - AGR_C_2122 - - H 1 2 AGR_C_2122p
1174803..1175531 + 726 15888520 - AGR_C_2185 - - - H 0 0 AGR_C_2185p
1178683..1178901 + 216 15888522 - AGR_C_2188 - - - H 1 2 AGR_C_2188p
1179468..1179737 + 267 15888523 - AGR_C_2189 - - - H 1 2 +S 3.0 AGR_C_2189p
1179799..1181187 + 1386 15888524 - AGR_C_2190 - - - H 1 0 AGR_C_2190p
1181166..1181321 - 153 15888525 - AGR_C_2191 - - - H 2 2 AGR_C_2191p
1181603..1181902 + 297 15888526 - AGR_C_2193 - - - H 2 2 +Q 3.0 AGR_C_2193p
1214586..1215083 + 495 15888557 - AGR_C_2254 - - - H 1 2 +NS 3.9 3.5 AGR_C_2254p
1215221..1215952 + 729 15888558 - AGR_C_2256 - - - H 1 2 +K 3.1 AGR_C_2256p
1216680..1216817 - 135 15888559 - AGR_C_2258 - - - H 2 2 +FWY 4.0 3.4 3.7 AGR_C_2258p
1217448..1218134 - 684 15888560 - AGR_C_2262 - - - H 1 0 AGR_C_2262p
1218385..1219188 + 801 15888561 - AGR_C_2265 S COG1238 - H 0 0 AGR_C_2265p
1219294..1219881 + 585 15888562 - AGR_C_2266 - COG3453 - H 2 0 AGR_C_2266p
1221832..1222509 - 675 15888564 - AGR_C_2275 - - - H 1 2 +ST 4.2 3.6 AGR_C_2275p
1222645..1222839 - 192 15888565 - AGR_C_2277 - - - H 2 2 +N 3.8 AGR_C_2277p
1240773..1241288 + 513 15888582 - AGR_C_2313 - - H 1 1 AGR_C_2313p
1251674..1251838 + 162 15888592 - AGR_C_2333 - - - H 1 2 +CP 3.4 3.8 AGR_C_2333p
1254195..1254314 - 117 15888594 - AGR_C_2336 - - - H 2 2 +T 3.1 AGR_C_2336p
1254408..1254545 - 135 15888595 - AGR_C_2337 - - - H 2 2 AGR_C_2337p
1254847..1255302 - 453 15888596 - AGR_C_2338 - - - H 2 2 +K 3.6 AGR_C_2338p
1256017..1256382 + 363 15888597 - AGR_C_2340 C COG0838 - H 2 2 +FW 5.2 3.1 AGR_C_2340p
1286117..1286575 + 456 15888623 - AGR_C_2385 T COG0784 H 1 1 AGR_C_2385p
1301255..1301686 - 429 15888634 - AGR_C_2408 - - H 2 2 AGR_C_2408p
1304500..1304808 + 306 15888637 - AGR_C_2413 - - H 1 2 AGR_C_2413p
1304805..1305179 + 372 15888638 - AGR_C_2415 N COG3668 H 2 2 AGR_C_2415p
1318517..1319005 - 486 15888657 - AGR_C_2456 E COG0757 H 1 1 AGR_C_2456p
1354288..1354704 - 414 15888687 - AGR_C_2518 - - H 2 2 AGR_C_2518p
1357776..1358129 + 351 15888689 - AGR_C_2522 S COG2127 H 2 2 AGR_C_2522p
1422948..1423292 + 342 15888753 - AGR_C_2633 O COG2919 H 2 2 AGR_C_2633p
1524374..1524871 + 495 15888857 - AGR_C_2827 E COG0346 H 1 2 AGR_C_2827p
1542174..1542599 - 423 15888874 - AGR_C_2863 T COG2202 H 2 2 AGR_C_2863p
1552254..1552883 - 627 15888884 - AGR_C_2882 E COG1045 H 2 2 AGR_C_2882p
1622852..1623253 + 399 15888946 - AGR_C_3015 S COG2261 - H 2 2 +I 3.8 AGR_C_3015p
1623650..1624087 - 435 15888947 - AGR_C_3017 - - - H 0 1 AGR_C_3017p
1624398..1624730 + 330 15888948 - AGR_C_3018 - - - H 2 2 AGR_C_3018p
1624856..1625149 + 291 15888949 - AGR_C_3019 - - - H 2 2 +L 3.2 AGR_C_3019p
1625258..1625395 - 135 15888950 - AGR_C_3022 - - - H 2 2 +CHS 4.3 3.7 5.4 AGR_C_3022p
1662044..1663141 + 1095 15888981 - AGR_C_3081 K COG2771 H 1 1 AGR_C_3081p
1702975..1703292 - 315 15889023 - AGR_C_3153 - - H 2 2 AGR_C_3153p
1739999..1740658 + 657 15889058 - AGR_C_3219 - - H 1 1 AGR_C_3219p
1743045..1743479 - 432 15889061 - AGR_C_3227 - - H 1 1 AGR_C_3227p
1768995..1769363 - 366 15889087 - AGR_C_3279 - COG0864 H 2 2 AGR_C_3279p
1787621..1788076 - 453 15889106 - AGR_C_3314 E COG0346 - H 2 1 AGR_C_3314p
1789375..1789647 - 270 15889109 - AGR_C_3318 - - - H 2 2 +IS 3.5 3.6 AGR_C_3318p
1789837..1790106 + 267 15889110 - AGR_C_3319 - - - H 0 2 +CH 4.4 4.7 AGR_C_3319p
1850332..1850715 - 381 15889172 - AGR_C_3434 E COG0346 H 2 2 AGR_C_3434p
1862349..1862774 + 423 15889181 - AGR_C_3453 - - H 2 1 AGR_C_3453p
1865077..1865565 - 486 15889184 - AGR_C_3460 K COG1522 H 1 2 AGR_C_3460p
1890162..1890476 + 312 15889207 - AGR_C_3504 - - H 1 2 AGR_C_3504p
1939400..1939495 - 93 15889262 - AGR_C_3588 - - - H 2 2 +LMWY 3.5 3.3 5.5 3.5 AGR_C_3588p
1939617..1939709 - 90 15889263 - AGR_C_3589 - - - H 0 2 AGR_C_3589p
1939850..1940425 - 573 15889264 - AGR_C_3592 - - - H 1 2 +CKS 3.4 3.4 3.2 AGR_C_3592p
1940546..1940947 + 399 15889265 - AGR_C_3593 - - - H 1 2 AGR_C_3593p
1941023..1941271 + 246 15889266 - AGR_C_3594 - - - H 2 2 AGR_C_3594p
1941321..1942346 - 1023 15889267 - AGR_C_3595 M COG2230 - H 0 0 AGR_C_3595p
1942343..1943230 - 885 15889268 - AGR_C_3597 S COG3752 - H 0 0 AGR_C_3597p
1943320..1944693 + 1371 15889269 - AGR_C_3599 R COG2907 - H 0 0 AGR_C_3599p
1944690..1945508 + 816 15889270 - AGR_C_3600 S COG3496 - H 0 0 AGR_C_3600p
1945495..1946727 + 1230 15889271 - AGR_C_3601 M COG2230 - H 0 0 AGR_C_3601p
1947173..1947604 + 429 15889273 - AGR_C_3604 - - - H 0 2 +Y 3.4 AGR_C_3604p
1947601..1948272 + 669 15889274 - AGR_C_3605 K COG1595 - H 1 2 AGR_C_3605p
1950109..1950546 - 435 15889277 - AGR_C_3613 T COG0784 H 2 2 AGR_C_3613p
1952207..1952581 + 372 15889279 - AGR_C_3615 T COG0784 H 2 2 AGR_C_3615p
1953641..1954111 - 468 15889281 - AGR_C_3618 T COG0784 H 1 1 AGR_C_3618p
1969395..1969856 + 459 15889297 - AGR_C_3645 - - H 1 1 AGR_C_3645p
1979396..1979782 - 384 15889306 - AGR_C_3659 S COG2161 H 1 2 AGR_C_3659p
2007589..2008095 + 504 15889336 - AGR_C_3712 S COG3814 H 1 1 AGR_C_3712p
2034640..2034963 - 321 15889358 - AGR_C_3759 - - H 2 2 AGR_C_3759p
2069526..2069930 + 402 15889387 - AGR_C_3816 - - - H 1 2 AGR_C_3816p
2069940..2070536 + 594 15889388 - AGR_C_3818 - - - H 1 2 +N 3.2 AGR_C_3818p
2070538..2071083 + 543 15889389 - AGR_C_3820 E COG0754 - H 1 0 AGR_C_3820p
2071078..2072616 - 1536 15889390 - AGR_C_3822 L COG2801 - H 1 0 AGR_C_3822p
2072676..2073305 + 627 15889391 - AGR_C_3823 E COG0754 - H 1 2 AGR_C_3823p
2105275..2105721 - 444 15889421 - AGR_C_3881 S COG3744 H 2 2 AGR_C_3881p
2105684..2106112 - 426 15889422 - AGR_C_3882 - - H 2 2 AGR_C_3882p
2220772..2221080 + 306 15889524 - AGR_C_4090 - - H 1 2 AGR_C_4090p
2224092..2225102 + 1008 15889529 - AGR_C_4098 R COG0714 + H 1 0 AGR_C_4098p
2225133..2226053 + 918 15889530 - AGR_C_4100 S COG1721 + H 1 0 AGR_C_4100p
2226050..2228860 + 2808 15889531 - AGR_C_4102 - - + H 1 0 AGR_C_4102p
2228862..2230946 + 2082 15889532 - AGR_C_4105 - - + H 0 0 AGR_C_4105p
2231459..2232772 - 1311 15889534 - AGR_C_4107 G COG0477 + H 0 0 AGR_C_4107p
2273215..2273826 - 609 15889574 - AGR_C_4176 - - H 1 1 AGR_C_4176p
2295076..2295672 - 594 15889594 - AGR_C_4215 - - H 2 2 AGR_C_4215p
2347410..2347766 - 354 15889647 - AGR_C_4309 - - H 2 2 AGR_C_4309p
2357802..2358245 + 441 15889658 - AGR_C_4330 L COG0494 H 1 1 AGR_C_4330p
2393443..2394159 - 714 15889691 - AGR_C_4393 G COG0726 H 2 1 AGR_C_4393p
2403100..2403471 + 369 15889701 - AGR_C_4412 R COG2388 H 1 1 AGR_C_4412p
2428017..2428799 - 780 15889729 - AGR_C_4465 P COG1120 + H 1 0 AGR_C_4465p
2428796..2429884 - 1086 15889730 - AGR_C_4466 P COG0609 + H 2 0 AGR_C_4466p
2429881..2430819 - 936 15889731 - AGR_C_4467 P COG0614 + H 1 0 AGR_C_4467p
2431280..2431843 + 561 15889733 - AGR_C_4470 P COG3721 + H 1 0 AGR_C_4470p
2432070..2432846 + 774 15889734 - AGR_C_4472 O COG3187 + H 2 0 +R 4.2 AGR_C_4472p
2433984..2435378 - 1392 15889736 - AGR_C_4477 T COG0642 + H 1 0 AGR_C_4477p
2435375..2436112 - 735 15889737 - AGR_C_4479 T COG0745 + H 0 0 AGR_C_4479p
2509216..2509995 - 777 15889802 - AGR_C_4609 K COG1309 - H 1 2 AGR_C_4609p
2512675..2512932 - 255 15889804 - AGR_C_4612 - - - H 2 2 +CT 3.2 4.0 AGR_C_4612p
2515396..2515929 + 531 15889805 - AGR_C_4613 - - - H 2 2 +F 3.5 AGR_C_4613p
2515926..2516468 + 540 15889806 - AGR_C_4614 - - - H 1 2 +HQS 3.3 4.8 3.6 AGR_C_4614p
2519008..2519958 + 948 15889807 - AGR_C_4615 F COG0152 - H 0 0 AGR_C_4615p
2519962..2520621 + 657 15889808 - AGR_C_4617 K COG1309 - H 1 0 AGR_C_4617p
2617505..2617981 - 474 15889889 - AGR_C_4774 S COG3686 H 1 2 AGR_C_4774p
2631465..2631842 + 375 15889902 - AGR_C_4796 - - H 1 2 AGR_C_4796p
2683414..2683731 + 315 15889952 - AGR_C_4890A E COG1605 H 1 2 AGR_C_4890Ap
2700185..2700577 - 390 15889967 - AGR_C_4920 R COG3607 H 1 2 AGR_C_4920p
2736961..2737677 + 714 15889989 - AGR_C_4967 K COG2186 H 1 2 AGR_C_4967p
2776300..2776785 + 483 15890020 - AGR_C_5028 P COG2193 H 2 1 AGR_C_5028p
2782165..2782656 - 489 15890026 - AGR_C_5039 S COG0799 H 2 2 AGR_C_5039p
2834153..2834770 - 615 15890075 - AGR_C_5132 M COG0357 H 2 2 AGR_C_5132p

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